| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is vpr [H]
Identifier: 94986321
GI number: 94986321
Start: 2340452
End: 2343127
Strand: Reverse
Name: vpr [H]
Synonym: Dgeo_2222
Alternate gene names: 94986321
Gene position: 2343127-2340452 (Counterclockwise)
Preceding gene: 94986322
Following gene: 94986318
Centisome position: 94.97
GC content: 63.53
Gene sequence:
>2676_bases GTGAACAAGACTGCCAAGACGCTTGCCCTACTCAGCCTGTCCCTGGTTTTGGGTGCCTGCGGTCAGAGCGGCGCACCCAC TGCCACCGCACCCCAGGGCGCCCTGCTGCCCGCATCGGCCCACGCCAACAACCTGACCCCTAGCCGGTGGTTTGTGGAAT TGGAGGGGGACCCCACCGCCCTAGGAACCCAGAGCATCAGCAGTCAGCAGGCCAGCTTCCGCGCGCAGGCTCAGAGCCTT GGCCTTCACTACCAGGAAGTGCGCAGCTACAACACGCTGTTTAACGGCTTTAGTGTCATCGCCACCGGCAGTGAGATCAA CCGTATCTCCCGGATGCCGGGTGTGCTGGGCGTGTACCCGGTCCACAGGGTTGACCTGCCCAAGCCTGACCTGCAGGCCG CCCTGCAGCCGCAGATGTTCTACGCCAAGGGCATGACCGGCGCGGATATCGCCCAAAACGAACTGGGCCTGACCGGCAAG GGCGTGAAGGTCGGCGTGATCGACACGGGCATCGACGTGGATCACCCGGCCTTCCAGGGCCGCATCGTGGCTGGATACGA CTTCGTGGGGGATGATTACGGCAAGGATGGCAAGTATGTTCCGGTGCCTGACGACAACCCCGATGACTGTAATGGACACG GCACCCACGTCGCTGGGATTGTCGGCGGCAATGACCCTGCCACCGGCTTCAAGGGCGTCGCTCCTGAGGTGAGCTTTGGT GCCTACCGGATCTTCGGCTGTGAGGGCAGCTCCTACGACGACGTGATCCTGGCGGCCATGGAACGTGCCCAGAAGGACGG AATGCAGGTCATCAACATGAGCCTGGGGAGCGCCTTCGAGAACTGGAAGGAAACGCCCCTCGCCAAGGCTGCCGACCGCC TGGTGAAAAAAGGCGTGGTCGTCGTCGCGTCCGGCGGCAACAGCGGTGCGAACGGACAGTACAGCATGGGTGGCCCGACC ATGGGCGACAATGTGATCTCGGTCGCCTCGGTGGATAACGTCAAGGTTGACCTGGATAGCTTTACCCTCTCAGACGGCAG CAAGGTTGGTTACTACGTAGCGACCGGGGCACCTGAACCGACCAAGGGTCTGACCCTGCCCATCACCAAGAAGCCGGGCA GCACGACGACGACACCCAACGACGGATGCACCGCCAGTGGAGGCTTTGCTGCGGGCAGTCTGACCGGCAAGGCCGTGCTG ATTCGCCGTGGCGGCTGCACCTTCTATGAGAAGGCCAGCAATGCCCAGAAGGCCGGAGCTGCCGCCGTCATCCTGTACAA CAACGCTGCCGGCTACATCAGCCCTACGGTGTCGGGCGAACCACCCATCACCATTCCGGTGGTGGCCATCAGCGATACCG ACGGTGCGAAGATCAACAGTCTGCTCGGCTCGGGCGTGAGCGTGACTTTCGACGGCGGCAAGATTGCCGTGGCCAACCCC ACCGGCAACACCATCAGCAGCTTCTCGTCCATCGGCATGTCCGCCGAGCTGGAACTCAAGCCGGACATCGCCGCGCCCGG CGGAAACATCTACAGCAGCTATCCCCTCAGTGCCGATCCCAGTGGCTACGCCGTCCTGAGCGGCACCAGCATGGCCTCGC CGCACGTGGCTGGGGCGGCGGCCCTGATGCTTCAGGCGTATCCCAACACCCAGGCCAAGGACATGCGCACCCTGCTGATG AACACCGCCTCGCTGCGCTGGTTCTACAACAACAAACCGCTGGAAGGGATCCCCGACTATGTGCAGCGCCAAGGCGCGGG CATGGTGGACATCGTGAACGCCTACGACAACACGGTGCGTGCCACGCCCAGCAAGCTCAGCCTGGGTGAGAGCGAGACCT TCGCCACCCGCAGCAAGGTGGTCGTCCTGAAGAACACCGGCGCCAAGCGCGAGGTCTACCAGGTGACCCACGTGCCCGCC CTGACGATCAGCGGCACCACCAACGCGCCCAAGCCCAGCGGGGCAGTCGCCAGCATGACCATCAACGGTACCGATGTGGA CAACGGCAGCCTGGAAGTCGTGGTGCCGCCCTTTGGTGAGGTGGAACTGAACGTGACCATCACCCCACCCGGCGGCGCTG CCGACAATTCGCAGTACGGCGGGTACATCTCGCTCAAGAGCGCGACCGGTGCCAATCTGGTGGTGCCCTACAGCGGCTTT AAGGGCGACTACCAGAGCCTGAAGTCCTTTGGGGACGTCACCCTTGACGGGAAGACCCGCCTCAACTTCCCCATCCTGGT GGACGACGCGGCGGACGACTTCTACCAGGAAGGCCAGACCCTCAATGCCGTGCCCGACTACACCTTTAAGAAGGTGGAGG TCACCTACAGCGACGGCACAAAGGCGACCGTCCTGGACGCCCCGTATCTGCTGGCGAACCTCGCGCACCAGATCCGCACG CTGACCTTCGAGCTGCTCGATGCCAACGGGAATGTCGTGGATACGCTCGGCAAGTACAACTACCTCAGCCGAGACTGCAC CGACGACTACACCAAGACCAGCTCCACCTGCACGGCCTTCGAGGCTTTCGATTGGGACGGCAAGCTCAGCAACGGTCAGG ACGCCCCGAATGGCCTCTACCAGCTGCGCCTGCGTGCCCTCAAGCCGCTGGGCGACGAGAGCAACCCCGCTCATACCGAG GTCTACACCAGCCAGCGCTTCGCCGTCGTGCGCTGA
Upstream 100 bases:
>100_bases CAGCTTTGACATCTACGACGATGAGCAGCTGACCGACGACCGGGCGACCAACACCTACCAGATTCTGCTGACGCGCCGCT AACTACGAAGGAGTGAGTCC
Downstream 100 bases:
>100_bases TCTGCACCCAGGTAAACCGGAAAAGGAGGCACACGCCTTTTCCGGTTTCTTGTTGCTTGGTGTTGCTTATCCCAGCGCCG CCAGCGCGTTCTCCCAGCGC
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 891; Mature: 891
Protein sequence:
>891_residues MNKTAKTLALLSLSLVLGACGQSGAPTATAPQGALLPASAHANNLTPSRWFVELEGDPTALGTQSISSQQASFRAQAQSL GLHYQEVRSYNTLFNGFSVIATGSEINRISRMPGVLGVYPVHRVDLPKPDLQAALQPQMFYAKGMTGADIAQNELGLTGK GVKVGVIDTGIDVDHPAFQGRIVAGYDFVGDDYGKDGKYVPVPDDNPDDCNGHGTHVAGIVGGNDPATGFKGVAPEVSFG AYRIFGCEGSSYDDVILAAMERAQKDGMQVINMSLGSAFENWKETPLAKAADRLVKKGVVVVASGGNSGANGQYSMGGPT MGDNVISVASVDNVKVDLDSFTLSDGSKVGYYVATGAPEPTKGLTLPITKKPGSTTTTPNDGCTASGGFAAGSLTGKAVL IRRGGCTFYEKASNAQKAGAAAVILYNNAAGYISPTVSGEPPITIPVVAISDTDGAKINSLLGSGVSVTFDGGKIAVANP TGNTISSFSSIGMSAELELKPDIAAPGGNIYSSYPLSADPSGYAVLSGTSMASPHVAGAAALMLQAYPNTQAKDMRTLLM NTASLRWFYNNKPLEGIPDYVQRQGAGMVDIVNAYDNTVRATPSKLSLGESETFATRSKVVVLKNTGAKREVYQVTHVPA LTISGTTNAPKPSGAVASMTINGTDVDNGSLEVVVPPFGEVELNVTITPPGGAADNSQYGGYISLKSATGANLVVPYSGF KGDYQSLKSFGDVTLDGKTRLNFPILVDDAADDFYQEGQTLNAVPDYTFKKVEVTYSDGTKATVLDAPYLLANLAHQIRT LTFELLDANGNVVDTLGKYNYLSRDCTDDYTKTSSTCTAFEAFDWDGKLSNGQDAPNGLYQLRLRALKPLGDESNPAHTE VYTSQRFAVVR
Sequences:
>Translated_891_residues MNKTAKTLALLSLSLVLGACGQSGAPTATAPQGALLPASAHANNLTPSRWFVELEGDPTALGTQSISSQQASFRAQAQSL GLHYQEVRSYNTLFNGFSVIATGSEINRISRMPGVLGVYPVHRVDLPKPDLQAALQPQMFYAKGMTGADIAQNELGLTGK GVKVGVIDTGIDVDHPAFQGRIVAGYDFVGDDYGKDGKYVPVPDDNPDDCNGHGTHVAGIVGGNDPATGFKGVAPEVSFG AYRIFGCEGSSYDDVILAAMERAQKDGMQVINMSLGSAFENWKETPLAKAADRLVKKGVVVVASGGNSGANGQYSMGGPT MGDNVISVASVDNVKVDLDSFTLSDGSKVGYYVATGAPEPTKGLTLPITKKPGSTTTTPNDGCTASGGFAAGSLTGKAVL IRRGGCTFYEKASNAQKAGAAAVILYNNAAGYISPTVSGEPPITIPVVAISDTDGAKINSLLGSGVSVTFDGGKIAVANP TGNTISSFSSIGMSAELELKPDIAAPGGNIYSSYPLSADPSGYAVLSGTSMASPHVAGAAALMLQAYPNTQAKDMRTLLM NTASLRWFYNNKPLEGIPDYVQRQGAGMVDIVNAYDNTVRATPSKLSLGESETFATRSKVVVLKNTGAKREVYQVTHVPA LTISGTTNAPKPSGAVASMTINGTDVDNGSLEVVVPPFGEVELNVTITPPGGAADNSQYGGYISLKSATGANLVVPYSGF KGDYQSLKSFGDVTLDGKTRLNFPILVDDAADDFYQEGQTLNAVPDYTFKKVEVTYSDGTKATVLDAPYLLANLAHQIRT LTFELLDANGNVVDTLGKYNYLSRDCTDDYTKTSSTCTAFEAFDWDGKLSNGQDAPNGLYQLRLRALKPLGDESNPAHTE VYTSQRFAVVR >Mature_891_residues MNKTAKTLALLSLSLVLGACGQSGAPTATAPQGALLPASAHANNLTPSRWFVELEGDPTALGTQSISSQQASFRAQAQSL GLHYQEVRSYNTLFNGFSVIATGSEINRISRMPGVLGVYPVHRVDLPKPDLQAALQPQMFYAKGMTGADIAQNELGLTGK GVKVGVIDTGIDVDHPAFQGRIVAGYDFVGDDYGKDGKYVPVPDDNPDDCNGHGTHVAGIVGGNDPATGFKGVAPEVSFG AYRIFGCEGSSYDDVILAAMERAQKDGMQVINMSLGSAFENWKETPLAKAADRLVKKGVVVVASGGNSGANGQYSMGGPT MGDNVISVASVDNVKVDLDSFTLSDGSKVGYYVATGAPEPTKGLTLPITKKPGSTTTTPNDGCTASGGFAAGSLTGKAVL IRRGGCTFYEKASNAQKAGAAAVILYNNAAGYISPTVSGEPPITIPVVAISDTDGAKINSLLGSGVSVTFDGGKIAVANP TGNTISSFSSIGMSAELELKPDIAAPGGNIYSSYPLSADPSGYAVLSGTSMASPHVAGAAALMLQAYPNTQAKDMRTLLM NTASLRWFYNNKPLEGIPDYVQRQGAGMVDIVNAYDNTVRATPSKLSLGESETFATRSKVVVLKNTGAKREVYQVTHVPA LTISGTTNAPKPSGAVASMTINGTDVDNGSLEVVVPPFGEVELNVTITPPGGAADNSQYGGYISLKSATGANLVVPYSGF KGDYQSLKSFGDVTLDGKTRLNFPILVDDAADDFYQEGQTLNAVPDYTFKKVEVTYSDGTKATVLDAPYLLANLAHQIRT LTFELLDANGNVVDTLGKYNYLSRDCTDDYTKTSSTCTAFEAFDWDGKLSNGQDAPNGLYQLRLRALKPLGDESNPAHTE VYTSQRFAVVR
Specific function: Not required for growth or sporulation [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319893, Length=189, Percent_Identity=28.5714285714286, Blast_Score=76, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR010259 - InterPro: IPR003137 [H]
Pfam domain/function: PF05922 Inhibitor_I9; PF02225 PA; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 93180; Mature: 93180
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTAKTLALLSLSLVLGACGQSGAPTATAPQGALLPASAHANNLTPSRWFVELEGDPTA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCC LGTQSISSQQASFRAQAQSLGLHYQEVRSYNTLFNGFSVIATGSEINRISRMPGVLGVYP CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHCCCCEEECC VHRVDLPKPDLQAALQPQMFYAKGMTGADIAQNELGLTGKGVKVGVIDTGIDVDHPAFQG EEECCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC RIVAGYDFVGDDYGKDGKYVPVPDDNPDDCNGHGTHVAGIVGGNDPATGFKGVAPEVSFG EEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC AYRIFGCEGSSYDDVILAAMERAQKDGMQVINMSLGSAFENWKETPLAKAADRLVKKGVV EEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHCCEE VVASGGNSGANGQYSMGGPTMGDNVISVASVDNVKVDLDSFTLSDGSKVGYYVATGAPEP EEECCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEECEEEECCCCEEEEEEEECCCCC TKGLTLPITKKPGSTTTTPNDGCTASGGFAAGSLTGKAVLIRRGGCTFYEKASNAQKAGA CCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHCCCCCCCCC AAVILYNNAAGYISPTVSGEPPITIPVVAISDTDGAKINSLLGSGVSVTFDGGKIAVANP EEEEEEECCCCEECCCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCEEEECCCEEEEECC TGNTISSFSSIGMSAELELKPDIAAPGGNIYSSYPLSADPSGYAVLSGTSMASPHVAGAA CCCHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCHHHHE ALMLQAYPNTQAKDMRTLLMNTASLRWFYNNKPLEGIPDYVQRQGAGMVDIVNAYDNTVR EEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCEE ATPSKLSLGESETFATRSKVVVLKNTGAKREVYQVTHVPALTISGTTNAPKPSGAVASMT CCCCCCCCCCCCCEECCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCEEEEE INGTDVDNGSLEVVVPPFGEVELNVTITPPGGAADNSQYGGYISLKSATGANLVVPYSGF ECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCC KGDYQSLKSFGDVTLDGKTRLNFPILVDDAADDFYQEGQTLNAVPDYTFKKVEVTYSDGT CCCHHHHHHCCCEEECCCEEECCCEEEECCCHHHHHCCCEEECCCCCCEEEEEEEECCCC KATVLDAPYLLANLAHQIRTLTFELLDANGNVVDTLGKYNYLSRDCTDDYTKTSSTCTAF EEEEECCHHHHHHHHHHHHEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHCCCCCEEEE EAFDWDGKLSNGQDAPNGLYQLRLRALKPLGDESNPAHTEVYTSQRFAVVR EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEC >Mature Secondary Structure MNKTAKTLALLSLSLVLGACGQSGAPTATAPQGALLPASAHANNLTPSRWFVELEGDPTA CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCC LGTQSISSQQASFRAQAQSLGLHYQEVRSYNTLFNGFSVIATGSEINRISRMPGVLGVYP CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEECHHHHHHHHCCCCEEECC VHRVDLPKPDLQAALQPQMFYAKGMTGADIAQNELGLTGKGVKVGVIDTGIDVDHPAFQG EEECCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCC RIVAGYDFVGDDYGKDGKYVPVPDDNPDDCNGHGTHVAGIVGGNDPATGFKGVAPEVSFG EEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC AYRIFGCEGSSYDDVILAAMERAQKDGMQVINMSLGSAFENWKETPLAKAADRLVKKGVV EEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHCCEE VVASGGNSGANGQYSMGGPTMGDNVISVASVDNVKVDLDSFTLSDGSKVGYYVATGAPEP EEECCCCCCCCCEEECCCCCCCCCEEEEEECCCEEEEECEEEECCCCEEEEEEEECCCCC TKGLTLPITKKPGSTTTTPNDGCTASGGFAAGSLTGKAVLIRRGGCTFYEKASNAQKAGA CCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCHHHHCCCCCCCCC AAVILYNNAAGYISPTVSGEPPITIPVVAISDTDGAKINSLLGSGVSVTFDGGKIAVANP EEEEEEECCCCEECCCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCEEEECCCEEEEECC TGNTISSFSSIGMSAELELKPDIAAPGGNIYSSYPLSADPSGYAVLSGTSMASPHVAGAA CCCHHHHHHHCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCHHHHE ALMLQAYPNTQAKDMRTLLMNTASLRWFYNNKPLEGIPDYVQRQGAGMVDIVNAYDNTVR EEEEEECCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEECCCCCEE ATPSKLSLGESETFATRSKVVVLKNTGAKREVYQVTHVPALTISGTTNAPKPSGAVASMT CCCCCCCCCCCCCEECCCEEEEEECCCCCCEEEEEECCCEEEEECCCCCCCCCCCEEEEE INGTDVDNGSLEVVVPPFGEVELNVTITPPGGAADNSQYGGYISLKSATGANLVVPYSGF ECCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCC KGDYQSLKSFGDVTLDGKTRLNFPILVDDAADDFYQEGQTLNAVPDYTFKKVEVTYSDGT CCCHHHHHHCCCEEECCCEEECCCEEEECCCHHHHHCCCEEECCCCCCEEEEEEEECCCC KATVLDAPYLLANLAHQIRTLTFELLDANGNVVDTLGKYNYLSRDCTDDYTKTSSTCTAF EEEEECCHHHHHHHHHHHHEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHCCCCCEEEE EAFDWDGKLSNGQDAPNGLYQLRLRALKPLGDESNPAHTEVYTSQRFAVVR EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1938892; 7934828; 9384377; 10658653 [H]