| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985257
Identifier: 94985257
GI number: 94985257
Start: 1226738
End: 1227445
Strand: Reverse
Name: 94985257
Synonym: Dgeo_1155
Alternate gene names: NA
Gene position: 1227445-1226738 (Counterclockwise)
Preceding gene: 94985258
Following gene: 94985256
Centisome position: 49.75
GC content: 63.98
Gene sequence:
>708_bases ATGCCCCAGCCCACTTTCCTCCGTTCCATCTGCACTGTTCCTGTGACACCGGGCACCCACCTCGAAGACCAGCGGCTATG GACACGTGTGTTTGCTGGCTGGCGCTTGCAGCCGGTGCGTCTCCCGAGCGGCACATTGACCGAGGAGGTCGAGCGGGCGC TGCGGCTGGTGATTGGGCGAGATCAGTCGGAAGCACGGGCCGGAGCGCTGGTGTACGCTGTCTGGCCGCAGTCGGGCGAG ACCCTGTCTGCCCTGGTCAATACCCTGGACGGTGGACACTTCGTGACCGTGCGTGTTTTTGGCAAGCATCTCACTGAGGT GCAGGCAAAGGCGGAGGCCGTCATCACCCGGATGTTGCGTGAGGCTGCTTTTCGCTTTCCCCCCGGCACGCGGGTGGCCC TGGCGATGAGCGTGGACGGCACGCGAGTAGATCTGACGAGTGGCCAGGTTCGTGCGGGCCAAGGCGGCGCGCTGCGCGGG TTTTACACCGAAAACCGGTACGTCCTCAATGTCACGCTGGCCGTGCTGCTCTTCACCCTACTGGTGGTGATTTTTGTGAC CCCGGGGGCAGCCTACACACCGCTGGGGAAGGCATACGGCCTGGCCGAGCGGGTACTGTCGGCGGTGCTGCTGAACACCC TCTTGTTGGGGTCGCAGTTCCTGTTTTTTGCCCGTCACCGTCCCGTCATTGAATGGGAGCGGCCCTGA
Upstream 100 bases:
>100_bases GGGCGACAAGGACGCCAAGATCTACCTCGCTTCGCCCGCAGTGGCGGCTGCGACGGCGGTGATGGGGCGGATTGCCCTGC CGGAAGACCTGAAGGCGTGA
Downstream 100 bases:
>100_bases AGCCGCTCCGGAAGGAGACCTCCTATGCCCCGAGTCTGGAAATTCGGCGACTCCGTCAATACCGACGACATCCTCCCCGG CAAGTTTGCGCCCTTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPQPTFLRSICTVPVTPGTHLEDQRLWTRVFAGWRLQPVRLPSGTLTEEVERALRLVIGRDQSEARAGALVYAVWPQSGE TLSALVNTLDGGHFVTVRVFGKHLTEVQAKAEAVITRMLREAAFRFPPGTRVALAMSVDGTRVDLTSGQVRAGQGGALRG FYTENRYVLNVTLAVLLFTLLVVIFVTPGAAYTPLGKAYGLAERVLSAVLLNTLLLGSQFLFFARHRPVIEWERP
Sequences:
>Translated_235_residues MPQPTFLRSICTVPVTPGTHLEDQRLWTRVFAGWRLQPVRLPSGTLTEEVERALRLVIGRDQSEARAGALVYAVWPQSGE TLSALVNTLDGGHFVTVRVFGKHLTEVQAKAEAVITRMLREAAFRFPPGTRVALAMSVDGTRVDLTSGQVRAGQGGALRG FYTENRYVLNVTLAVLLFTLLVVIFVTPGAAYTPLGKAYGLAERVLSAVLLNTLLLGSQFLFFARHRPVIEWERP >Mature_234_residues PQPTFLRSICTVPVTPGTHLEDQRLWTRVFAGWRLQPVRLPSGTLTEEVERALRLVIGRDQSEARAGALVYAVWPQSGET LSALVNTLDGGHFVTVRVFGKHLTEVQAKAEAVITRMLREAAFRFPPGTRVALAMSVDGTRVDLTSGQVRAGQGGALRGF YTENRYVLNVTLAVLLFTLLVVIFVTPGAAYTPLGKAYGLAERVLSAVLLNTLLLGSQFLFFARHRPVIEWERP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25883; Mature: 25752
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQPTFLRSICTVPVTPGTHLEDQRLWTRVFAGWRLQPVRLPSGTLTEEVERALRLVIGR CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCC DQSEARAGALVYAVWPQSGETLSALVNTLDGGHFVTVRVFGKHLTEVQAKAEAVITRMLR CCCHHCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH EAAFRFPPGTRVALAMSVDGTRVDLTSGQVRAGQGGALRGFYTENRYVLNVTLAVLLFTL HHHHCCCCCCEEEEEEECCCCEEEECCCCEECCCCCCEEEEEECCEEEEHHHHHHHHHHH LVVIFVTPGAAYTPLGKAYGLAERVLSAVLLNTLLLGSQFLFFARHRPVIEWERP HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure PQPTFLRSICTVPVTPGTHLEDQRLWTRVFAGWRLQPVRLPSGTLTEEVERALRLVIGR CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCC DQSEARAGALVYAVWPQSGETLSALVNTLDGGHFVTVRVFGKHLTEVQAKAEAVITRMLR CCCHHCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHH EAAFRFPPGTRVALAMSVDGTRVDLTSGQVRAGQGGALRGFYTENRYVLNVTLAVLLFTL HHHHCCCCCCEEEEEEECCCCEEEECCCCEECCCCCCEEEEEECCEEEEHHHHHHHHHHH LVVIFVTPGAAYTPLGKAYGLAERVLSAVLLNTLLLGSQFLFFARHRPVIEWERP HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA