| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985049
Identifier: 94985049
GI number: 94985049
Start: 1007364
End: 1008632
Strand: Reverse
Name: 94985049
Synonym: Dgeo_0943
Alternate gene names: NA
Gene position: 1008632-1007364 (Counterclockwise)
Preceding gene: 94985058
Following gene: 94985048
Centisome position: 40.88
GC content: 67.77
Gene sequence:
>1269_bases ATGACGAAGGAAGCCTCCCGACCGGCCCTCGACCTGGCCCGCCAGGCGTATGAAGCCTTCAAAGCGCGCGGCCTGAACCT CAACATGCAGCGCGGCCAGCCCGCCGACGCTGACTTCGACCTTTCGAACGGCCTGCTCACCGTGCTGGGTGCAGAGGATG TCCGCATGGACGGCCTGGACCTGCGCAATTACCCCGGCGGCGTGGCGGGCCTGCCCTCGGCGCGGGCGCTGTTCGCCGGC TACCTCGATGTGAAGGCCGAAAACGTGCTGGTGTGGAACAACTCCAGCCTGGAACTCCAGGGCCTGGTGTTGACCTTTGC GCTGCTGCACGGCGTGCGCGGCAGCACCGGCCCCTGGCTTTCCCAGACTCCAAAGATGATCGTGACGGTCCCCGGCTACG ATCGCCACTTTCTGCTGCTGCAGACGCTGGGCTTCGAACTGCTGACGGTGGACATGCAGTCCGACGGGCCAGATGTGGAC GCTGTGGAGCGCCTGGCGGGAACTGATCCCTCGGTGAAGGGCATCCTGTTCGTGCCCACCTATTCCAACCCCGGCGGCGA GACCATCAGCCTGGAGAAAGCGCGGCGGCTGGCAGGCCTCCAGGCCGCAGCCCCCGACTTCACCATCTTTGCGGACGACG CCTACCGCGTTCACCACCTCGTGGAGGAGGACCGGGCCGAGCCGGTGAACTTCGTGGTGCTCGCCCGGGACGCGGGCTAC CCCGACCGCGCCTTCGTGTTCGCCTCCACCTCCAAGATCACCTTTGCGGGCGCAGGCCTAGGCTTTGTGGCGAGCAGCGA GGACAATATCCGGTGGCTCTCGAAGTATCTGGGCGCGCAGAGCATCGGCCCCAACAAGGTGGAGCAGGCGCGGCACGTGA AGTTCCTGACGGAGTACCCCGGCGGCCTGGAAGGGCTGATGCGCGACCACGCCGCGATCATCGCCCCCAAGTTCCGCGCG GTGGACGAGGTGCTGCGTGCCGAGCTGGGAGAAGGGGGCGAGTACGCCACCTGGACATTGCCAAAGGGCGGCTACTTCAT CAGCCTGGATACGGCGGAACCCGTCGCGGACCGCGTGGTGAAGCTCGCGGAGGCGGCTGGAGTGAGCCTGACCCCCGCCG GAGCCACCTACCCGGCGGGTCAAGACCCCCACAACCGCAACCTGCGCCTCGCACCGACGCGCCCCCCGGTGGAAGAGGTC CGCACGGCGATGCAGGTGGTGGCCGCGTGCATCCGGCTGGCGACGGAGGAATACCGGGCGGGGCACTGA
Upstream 100 bases:
>100_bases GGGCAGCGTGCATTCAGGCAGGGACATAGGCCCAGGGTAGAGGGTCTTCCCCGCTATGCAGCCCTTCCCCCTCCCGGCGC GGCACGGGTAACGTGAAGGC
Downstream 100 bases:
>100_bases GCGGAAAAAAAGCCCACTGAGCTGGGTCGCCCTCCTCAGCTTGATTTTCTGGCCCTCCAGCCCCGACCATAGCGCTCATG CCCACCCGCTACACAGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MTKEASRPALDLARQAYEAFKARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAG YLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVD AVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGY PDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRA VDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEV RTAMQVVAACIRLATEEYRAGH
Sequences:
>Translated_422_residues MTKEASRPALDLARQAYEAFKARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAG YLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVD AVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGY PDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRA VDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEV RTAMQVVAACIRLATEEYRAGH >Mature_421_residues TKEASRPALDLARQAYEAFKARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGY LDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVDA VERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYP DRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAV DEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVR TAMQVVAACIRLATEEYRAGH
Specific function: Unknown
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: NA
Molecular weight: Translated: 45546; Mature: 45415
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS00146 BETA_LACTAMASE_A
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEASRPALDLARQAYEAFKARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLD CCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCEECCCC LRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWL CCCCCCCCCCCCCHHHHHHHHEEEEECEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCC SQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPT CCCCCEEEECCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEC YSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGY CCCCCCCEEEHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCC PDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYP CCCEEEEEECCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC GGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVV CHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCHHHHHHH KLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLATEEYRA HHHHHCCCEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GH CC >Mature Secondary Structure TKEASRPALDLARQAYEAFKARGLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLD CCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCEECCCC LRNYPGGVAGLPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWL CCCCCCCCCCCCCHHHHHHHHEEEEECEEEEECCCCCEEHHHHHHHHHHHCCCCCCCCCC SQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPT CCCCCEEEECCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEC YSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGY CCCCCCCEEEHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCC PDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYP CCCEEEEEECCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCC GGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVV CHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCHHHHHHH KLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLATEEYRA HHHHHCCCEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA