| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is zur [H]
Identifier: 94984626
GI number: 94984626
Start: 547481
End: 547888
Strand: Reverse
Name: zur [H]
Synonym: Dgeo_0519
Alternate gene names: 94984626
Gene position: 547888-547481 (Counterclockwise)
Preceding gene: 94984627
Following gene: 94984625
Centisome position: 22.21
GC content: 69.12
Gene sequence:
>408_bases ATGACTGCCTCCCGTAGCACCCGCCAGCGCGACGTGATCACCCGCGTCCTCGACGGCGCGGAAGGTCCGCTCGCGGTGGG TGAGGTACTTCGCCGCGCACAGGCCGATTTGCCCGGGCTGGGGGTGGCGACGGTGTACCGTACCCTCAAGCTGCTCACCG AGCAGGGCCGCATCCATCCCGTGACGCTGGACGGCGAGACGCGCTACGAGCGGGCAGGACACGGCCATCACCACCACTTT TCCTGCACCGGCTGTGGGCGGGTGTTCACGCTGCACACTTGCCCAGTTGCCCTGCCCAGCGGCACGGTCTATCCGGGCGG CTTCATCGTCGAAGCGCATGAGGTCACGCTCTACGGGCGCTGCCCGGCCTGCGCGGCGGCTCCAGATTCGTCAGGCGCCG GACTGTAG
Upstream 100 bases:
>100_bases TATCCGCTGAGGCGCTCCTCCCCCGGCCCGCCCGCAACGGTGGGCCGGTTTTGTGTGCGTTTTTTTGATAGAGCCGAATC ACTTCTGTTAGCCTACCGGT
Downstream 100 bases:
>100_bases CTCTCCTGCGGCATTCCTGCCTAGGGGGTTTCGGCCGGCTGGCCCCGCCGGGCCTTTGCTCAACGCTGGCCATCTGGACA GGTCCAGTTGACCCTCACGC
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTASRSTRQRDVITRVLDGAEGPLAVGEVLRRAQADLPGLGVATVYRTLKLLTEQGRIHPVTLDGETRYERAGHGHHHHF SCTGCGRVFTLHTCPVALPSGTVYPGGFIVEAHEVTLYGRCPACAAAPDSSGAGL
Sequences:
>Translated_135_residues MTASRSTRQRDVITRVLDGAEGPLAVGEVLRRAQADLPGLGVATVYRTLKLLTEQGRIHPVTLDGETRYERAGHGHHHHF SCTGCGRVFTLHTCPVALPSGTVYPGGFIVEAHEVTLYGRCPACAAAPDSSGAGL >Mature_134_residues TASRSTRQRDVITRVLDGAEGPLAVGEVLRRAQADLPGLGVATVYRTLKLLTEQGRIHPVTLDGETRYERAGHGHHHHFS CTGCGRVFTLHTCPVALPSGTVYPGGFIVEAHEVTLYGRCPACAAAPDSSGAGL
Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 14301; Mature: 14170
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASRSTRQRDVITRVLDGAEGPLAVGEVLRRAQADLPGLGVATVYRTLKLLTEQGRIHP CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEE VTLDGETRYERAGHGHHHHFSCTGCGRVFTLHTCPVALPSGTVYPGGFIVEAHEVTLYGR EEECCCCCHHHCCCCCCCEEEEECCCEEEEEEECCEECCCCCCCCCCEEEEEEEEEEEEC CPACAAAPDSSGAGL CCCCCCCCCCCCCCC >Mature Secondary Structure TASRSTRQRDVITRVLDGAEGPLAVGEVLRRAQADLPGLGVATVYRTLKLLTEQGRIHP CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEE VTLDGETRYERAGHGHHHHFSCTGCGRVFTLHTCPVALPSGTVYPGGFIVEAHEVTLYGR EEECCCCCHHHCCCCCCCEEEEECCCEEEEEEECCEECCCCCCCCCCEEEEEEEEEEEEC CPACAAAPDSSGAGL CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9811636 [H]