| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984627
Identifier: 94984627
GI number: 94984627
Start: 547979
End: 548836
Strand: Reverse
Name: 94984627
Synonym: Dgeo_0520
Alternate gene names: NA
Gene position: 548836-547979 (Counterclockwise)
Preceding gene: 94984628
Following gene: 94984626
Centisome position: 22.25
GC content: 68.88
Gene sequence:
>858_bases ATGGCAGACCGAGTGACGGTCGAGCGGGTCACGGTGGATCTCCCAGCGGCCGAGCGCGTCAAGGTGGAGCGGCCAACCAC CCCCGAACGCAACCTGGCCCCGGAGACGCGCACCCCCTATGTTCAGCCCAGCGGCCTGCCGGACAAGCGGCCGCTCACCG AACGTGAGGAGGCCCGCGCCCGCCTCAAGGCCAGCGTGGACGCCCTGGTCGAGCGCGCCAATCTGCAGGTGCAGCTCCAG AAAGAACCCCTCAGGATGCTGGGAGGTGCTTCAGCGGTAGGGGCGGCGGCCGGAACACTGCTGGGCGTCATCGTGGGGCG GCAGTTCCAGCGCACCAAGAAAATCTACGTGGATGCCGACAGCCCTGAAAAGCACCAGAAGGCCCTCATTCGCGCGCAGA AGAAGGAAAAGGGCGGGACCAGCGTCGGCGGCGCATTGGTCGCGACCCTCACCACGCTGGGCATCAAGGTCCTCAACGAC CGCGTGCTCACGCCCAAGCTTGAGGAGATGGCCCGCAACCTGCTTGACCGCGCTGGTCAGGAGGGGAGCCAGGGGGGGCG CCGCTCCACGCCGCGCACCGCGGACCAGGCGCAATCCGCCGCTACGGGCACGGCGGGTGGGTGGTCCCTTCGCCGCAGCC GTTCCAACCCGGCCCCAGCGGACACCAACGTCACCGCCAACTTTCTCAAGCGTGACGAGGGCGCACCCGCCAGCAACGCA GCGCGGGTTGGCGTCCCCGGCGGCCCCAGTGTGCCCGGCACCGGAAGCAGCATTCCCGCGCCTGTCAGCACCGTGGAGGC CAAGGCCCAGGGCAGCCCGATCAATCCCGAGGAAAAAGCCAACCCCAATATCCGCTGA
Upstream 100 bases:
>100_bases ACCCCAACATTCAGCACCCCGTTGTGCTCAAGGACCAGCCCGGCATTGACGTGAGCACCAAGCCCACGTTCCAAGAAGAC ATGAAGAAGGAGGGCTACTG
Downstream 100 bases:
>100_bases GGCGCTCCTCCCCCGGCCCGCCCGCAACGGTGGGCCGGTTTTGTGTGCGTTTTTTTGATAGAGCCGAATCACTTCTGTTA GCCTACCGGTATGACTGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MADRVTVERVTVDLPAAERVKVERPTTPERNLAPETRTPYVQPSGLPDKRPLTEREEARARLKASVDALVERANLQVQLQ KEPLRMLGGASAVGAAAGTLLGVIVGRQFQRTKKIYVDADSPEKHQKALIRAQKKEKGGTSVGGALVATLTTLGIKVLND RVLTPKLEEMARNLLDRAGQEGSQGGRRSTPRTADQAQSAATGTAGGWSLRRSRSNPAPADTNVTANFLKRDEGAPASNA ARVGVPGGPSVPGTGSSIPAPVSTVEAKAQGSPINPEEKANPNIR
Sequences:
>Translated_285_residues MADRVTVERVTVDLPAAERVKVERPTTPERNLAPETRTPYVQPSGLPDKRPLTEREEARARLKASVDALVERANLQVQLQ KEPLRMLGGASAVGAAAGTLLGVIVGRQFQRTKKIYVDADSPEKHQKALIRAQKKEKGGTSVGGALVATLTTLGIKVLND RVLTPKLEEMARNLLDRAGQEGSQGGRRSTPRTADQAQSAATGTAGGWSLRRSRSNPAPADTNVTANFLKRDEGAPASNA ARVGVPGGPSVPGTGSSIPAPVSTVEAKAQGSPINPEEKANPNIR >Mature_284_residues ADRVTVERVTVDLPAAERVKVERPTTPERNLAPETRTPYVQPSGLPDKRPLTEREEARARLKASVDALVERANLQVQLQK EPLRMLGGASAVGAAAGTLLGVIVGRQFQRTKKIYVDADSPEKHQKALIRAQKKEKGGTSVGGALVATLTTLGIKVLNDR VLTPKLEEMARNLLDRAGQEGSQGGRRSTPRTADQAQSAATGTAGGWSLRRSRSNPAPADTNVTANFLKRDEGAPASNAA RVGVPGGPSVPGTGSSIPAPVSTVEAKAQGSPINPEEKANPNIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30089; Mature: 29958
Theoretical pI: Translated: 10.96; Mature: 10.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRVTVERVTVDLPAAERVKVERPTTPERNLAPETRTPYVQPSGLPDKRPLTEREEARA CCCCEEEEEEEEECCCHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RLKASVDALVERANLQVQLQKEPLRMLGGASAVGAAAGTLLGVIVGRQFQRTKKIYVDAD HHHHHHHHHHHHHCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC SPEKHQKALIRAQKKEKGGTSVGGALVATLTTLGIKVLNDRVLTPKLEEMARNLLDRAGQ CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC EGSQGGRRSTPRTADQAQSAATGTAGGWSLRRSRSNPAPADTNVTANFLKRDEGAPASNA CCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCC ARVGVPGGPSVPGTGSSIPAPVSTVEAKAQGSPINPEEKANPNIR CEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCCCC >Mature Secondary Structure ADRVTVERVTVDLPAAERVKVERPTTPERNLAPETRTPYVQPSGLPDKRPLTEREEARA CCCEEEEEEEEECCCHHCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RLKASVDALVERANLQVQLQKEPLRMLGGASAVGAAAGTLLGVIVGRQFQRTKKIYVDAD HHHHHHHHHHHHHCCEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECC SPEKHQKALIRAQKKEKGGTSVGGALVATLTTLGIKVLNDRVLTPKLEEMARNLLDRAGQ CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC EGSQGGRRSTPRTADQAQSAATGTAGGWSLRRSRSNPAPADTNVTANFLKRDEGAPASNA CCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCC ARVGVPGGPSVPGTGSSIPAPVSTVEAKAQGSPINPEEKANPNIR CEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA