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The map label for this gene is 94984278

Identifier: 94984278

GI number: 94984278

Start: 159185

End: 159688

Strand: Reverse

Name: 94984278

Synonym: Dgeo_0170

Alternate gene names: NA

Gene position: 159688-159185 (Counterclockwise)

Preceding gene: 94984279

Following gene: 94984277

Centisome position: 6.47

GC content: 62.3

Gene sequence:

>504_bases
GTGAAAAGAGCTTTTTTCCGTACTGGTGATCGCGTCGTCCTTCCGCCATATGGGATTGGCGTGGTTAGTGGTACTTGCCA
GCGCCCGGTTGCCGGGTCCATCCAGGTCTACTATCAGGTGGACTTTCCCAACACAGCCAGCCGCGCCTTTGTCCCGGTTG
ATGCCCCGCAGAGCACTGGTCTGCGGGCCGCCCTGACCGCCGCAGACATGCCGGGTCTCCTGCAACGTCTCCAGTCCAGC
CAAACACTGAATCTACCCCGGCAATGGGCCGCCCGCCACCGCCGCGTCACCGAGATTCTGGTGGGCGGCGATCCCTACGA
AATCGCCACCCTCACCTGTGAATTGCGCCGCTGGAATATGGAACGTGGCCTACCGGATCTCGACCGGCAAGCCTTTCGGC
GCGCCATCCGCCTGCTTGAACAGGAAGTGCGCGGCCTGGAAGACCCGTGCGCTCAGGATGTGCAGCGTCTCCTCAACCAC
GTCTGGAACGAGACGCCGAATTGA

Upstream 100 bases:

>100_bases
CGGCACCAGGCCGGGCCGTTGCCATTGGGGGCCAGGAGACAGCGCCGACACAAGGGCAACGCCGCCCTTAGGCTTTTCGG
TCCTCACAGAGGTGACCACA

Downstream 100 bases:

>100_bases
AAACTGCCCCAGCTCCCAAAGCGCACACCCCCGCCTTGAGGGCGGGGGTGAAAGGTCAGATGAAGCCAATGATGAGGCAC
AGCGGAGCGATGTAGAAAGG

Product: CarD family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator CarD Family; Transcriptional Regulator Card Family; Transcriptional Regulator

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKRAFFRTGDRVVLPPYGIGVVSGTCQRPVAGSIQVYYQVDFPNTASRAFVPVDAPQSTGLRAALTAADMPGLLQRLQSS
QTLNLPRQWAARHRRVTEILVGGDPYEIATLTCELRRWNMERGLPDLDRQAFRRAIRLLEQEVRGLEDPCAQDVQRLLNH
VWNETPN

Sequences:

>Translated_167_residues
MKRAFFRTGDRVVLPPYGIGVVSGTCQRPVAGSIQVYYQVDFPNTASRAFVPVDAPQSTGLRAALTAADMPGLLQRLQSS
QTLNLPRQWAARHRRVTEILVGGDPYEIATLTCELRRWNMERGLPDLDRQAFRRAIRLLEQEVRGLEDPCAQDVQRLLNH
VWNETPN
>Mature_167_residues
MKRAFFRTGDRVVLPPYGIGVVSGTCQRPVAGSIQVYYQVDFPNTASRAFVPVDAPQSTGLRAALTAADMPGLLQRLQSS
QTLNLPRQWAARHRRVTEILVGGDPYEIATLTCELRRWNMERGLPDLDRQAFRRAIRLLEQEVRGLEDPCAQDVQRLLNH
VWNETPN

Specific function: Unknown

COG id: COG1329

COG function: function code K; Transcriptional regulators, similar to M. xanthus CarD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18869; Mature: 18869

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAFFRTGDRVVLPPYGIGVVSGTCQRPVAGSIQVYYQVDFPNTASRAFVPVDAPQSTG
CCCCCEECCCEEEECCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCC
LRAALTAADMPGLLQRLQSSQTLNLPRQWAARHRRVTEILVGGDPYEIATLTCELRRWNM
CCHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCEEEHHEEHHHHHHHH
ERGLPDLDRQAFRRAIRLLEQEVRGLEDPCAQDVQRLLNHVWNETPN
HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRAFFRTGDRVVLPPYGIGVVSGTCQRPVAGSIQVYYQVDFPNTASRAFVPVDAPQSTG
CCCCCEECCCEEEECCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCC
LRAALTAADMPGLLQRLQSSQTLNLPRQWAARHRRVTEILVGGDPYEIATLTCELRRWNM
CCHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCEEEHHEEHHHHHHHH
ERGLPDLDRQAFRRAIRLLEQEVRGLEDPCAQDVQRLLNHVWNETPN
HCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA