Click here to switch to the map view.

The map label for this gene is yehW [H]

Identifier: 94984279

GI number: 94984279

Start: 159941

End: 160690

Strand: Reverse

Name: yehW [H]

Synonym: Dgeo_0171

Alternate gene names: 94984279

Gene position: 160690-159941 (Counterclockwise)

Preceding gene: 94984280

Following gene: 94984278

Centisome position: 6.51

GC content: 66.13

Gene sequence:

>750_bases
GTGACGTTCCGCGCTCTCTCTCACCCCGCGCGGCACCTGCCCTGGGGCGTGGTCGTGTGGCCAACACTGCTGATCCTGTG
CCTGCTTCCCGGCGTGTTGCCCCGGTTGGTGGGGCCACTGTCGCCAGGACAGCTCCTCGTCTTCGATCCGCCGCTCTGGC
AGCTTACCCTGACCCATTTGGCCCTGGTGCTGCTTGCCACGGCCGTGGTGCTGCTTTTTGGCATCCCTCTCGCGGTCGTC
GTCACCCGACCGGGCCGCGAGGCGCTACAGCACCTGACCGAAACGCTGGTCGGCCTGGGCCAGACCGTGCCAACCTTTGC
GATCCTCGCGCTGGCGGTTCCCGCCCTGGGCTTCGGTTGGACACCTACGCTGCTGGGGCTGATCCTCTATGGTCTGGTGC
CGGTGGTGAGCAATGGAGTCGCAGGCCTTCTCGCTGTGGACCGCAATCTGCTGGACGCAGCGCGCGGCATGGGCATGTCG
AACGGGCAACGACTGTGGCGCGTTGAATTGCCGCTGGCCCTGCCCGTGCTGCTGGCTGGGATCCGCACCAGCACGGTCTA
TAACGTTGGCACCGCTACGGTCGGCGCGGCGCTGGGTGCAGGGGGCCTAGGCAGCCCCATCATCAATGGCCTCTCCCAAC
AAAACACCGGTCTGATCCTGATCGGCGCGGTGTTGGCGGCGCTGCTGGCCCTGAGCCTCGACGCGTTACTCGGTCTAGTT
TTCCGCTATGGAGACCCAGTCCCTAGGTAA

Upstream 100 bases:

>100_bases
TGATGTTGCGGGAAGGGACAGATGCCCTGGCCGTCAAGCGCGACGGCTTGTTCCTTGGCGTGCTGCGCTGGGAGGAACTG
CGCACGCAGGAGGCGCGGGC

Downstream 100 bases:

>100_bases
AGGGTGTCTCGTCCCTACCACCTCAAACGGTGATGGAGTCCTCATAAAAGGCTGCTAAGATGAGAATTATGCGGCCTGGG
TGCTCACCGGATAAAGCTCG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTFRALSHPARHLPWGVVVWPTLLILCLLPGVLPRLVGPLSPGQLLVFDPPLWQLTLTHLALVLLATAVVLLFGIPLAVV
VTRPGREALQHLTETLVGLGQTVPTFAILALAVPALGFGWTPTLLGLILYGLVPVVSNGVAGLLAVDRNLLDAARGMGMS
NGQRLWRVELPLALPVLLAGIRTSTVYNVGTATVGAALGAGGLGSPIINGLSQQNTGLILIGAVLAALLALSLDALLGLV
FRYGDPVPR

Sequences:

>Translated_249_residues
MTFRALSHPARHLPWGVVVWPTLLILCLLPGVLPRLVGPLSPGQLLVFDPPLWQLTLTHLALVLLATAVVLLFGIPLAVV
VTRPGREALQHLTETLVGLGQTVPTFAILALAVPALGFGWTPTLLGLILYGLVPVVSNGVAGLLAVDRNLLDAARGMGMS
NGQRLWRVELPLALPVLLAGIRTSTVYNVGTATVGAALGAGGLGSPIINGLSQQNTGLILIGAVLAALLALSLDALLGLV
FRYGDPVPR
>Mature_248_residues
TFRALSHPARHLPWGVVVWPTLLILCLLPGVLPRLVGPLSPGQLLVFDPPLWQLTLTHLALVLLATAVVLLFGIPLAVVV
TRPGREALQHLTETLVGLGQTVPTFAILALAVPALGFGWTPTLLGLILYGLVPVVSNGVAGLLAVDRNLLDAARGMGMSN
GQRLWRVELPLALPVLLAGIRTSTVYNVGTATVGAALGAGGLGSPIINGLSQQNTGLILIGAVLAALLALSLDALLGLVF
RYGDPVPR

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788449, Length=183, Percent_Identity=47.5409836065574, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1788451, Length=209, Percent_Identity=37.3205741626794, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1789033, Length=190, Percent_Identity=31.0526315789474, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 25891; Mature: 25759

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFRALSHPARHLPWGVVVWPTLLILCLLPGVLPRLVGPLSPGQLLVFDPPLWQLTLTHL
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
ALVLLATAVVLLFGIPLAVVVTRPGREALQHLTETLVGLGQTVPTFAILALAVPALGFGW
HHHHHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
TPTLLGLILYGLVPVVSNGVAGLLAVDRNLLDAARGMGMSNGQRLWRVELPLALPVLLAG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHH
IRTSTVYNVGTATVGAALGAGGLGSPIINGLSQQNTGLILIGAVLAALLALSLDALLGLV
HHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
FRYGDPVPR
HHCCCCCCC
>Mature Secondary Structure 
TFRALSHPARHLPWGVVVWPTLLILCLLPGVLPRLVGPLSPGQLLVFDPPLWQLTLTHL
CCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH
ALVLLATAVVLLFGIPLAVVVTRPGREALQHLTETLVGLGQTVPTFAILALAVPALGFGW
HHHHHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
TPTLLGLILYGLVPVVSNGVAGLLAVDRNLLDAARGMGMSNGQRLWRVELPLALPVLLAG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHH
IRTSTVYNVGTATVGAALGAGGLGSPIINGLSQQNTGLILIGAVLAALLALSLDALLGLV
HHHHHHHCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
FRYGDPVPR
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]