Click here to switch to the map view.

The map label for this gene is ylbA [H]

Identifier: 94972076

GI number: 94972076

Start: 445045

End: 445851

Strand: Direct

Name: ylbA [H]

Synonym: Dgeo_2608

Alternate gene names: 94972076

Gene position: 445045-445851 (Clockwise)

Preceding gene: 94972077

Following gene: 94972066

Centisome position: 77.52

GC content: 65.43

Gene sequence:

>807_bases
TTGAACCGCCAACCCAGCCTGCAACAGCTCGGCCAGACCCGCAGCGTGGTGAGTCAGGAATACGCGCTGCTGACGCCCGA
AACCTTTATTCGCACGACCTTGGCGGAGTGGAAGAACACGAGCTGCGTCGTCCATATCGCCCCAGTGATGGGCTTGGGTA
CGCGCTTCACCCAGTTCACCGCCGAGATGGGCGCGGGTGCCGAGGCGAGTGCGCCCCCTGCAGGAATCCAACGCTTCGTG
TTTGTGCTGGACGGCGAGGTCGAACTCCGGGTGAACGGCGAGACGCACCGTCTGGCGGAGTACGGCTACGCCTACCTGCC
CGCCGGGACGGACCACAGCCTGTGCGCGCAGGGCGGGGCGCGCGTCTCGGTCTTCGAGAAGAAGTTCCACGAGCAGGCAG
CAGGCCTTCCCGCGCCGCAGGTGGTGCTGGGCAACGAGCGCCAGATAACGGGCACCGAGTTCGAGGGTGACCCTGGGCTG
ATCGCGCGCAAGCTGCTCCCTGACGAACCCAGCTTCGATTTCATGGTGACCACCATGAGCTACGCGCCGGGCGCGACGCT
GCCCTACGTGGAGATCCACTACATGGAACACGGCCTCCTGATGCTGGAGGGGGAGGGCATCTACCGTCTGGGCGAGCGCT
ATTTCCAGGTGACCCGGGGAGACGTGATCTGGATGGGCGCGCACTGTCCGCAGTGGTACGGCGCCCTGGGCAAACAGTGG
AGCAAATACCTGCTCTACAAGGACATGAACCGCCACCCACTCGAACTCCGCTCACCTGCGGACCGTGCCGCGCGGGGGGC
CTTCTAG

Upstream 100 bases:

>100_bases
CGCGGCTGCGCGGTCAGACGGTATACGCCGAGGGCCGCTTCCCCCACCCGCCCCAGGGCCGCTTCCTGCGTCCCGCCCCC
GCGTCTTAGGAGGAAACCGC

Downstream 100 bases:

>100_bases
GGCCTGCACCCGGCGTGCGGGGCTGGCGGGGAGCAGGCAGCAAGAAAACCGGTCCCGACCGAAGTCAGGACCAGCAGGAG
GTCAGTGTTCTCTACTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MNRQPSLQQLGQTRSVVSQEYALLTPETFIRTTLAEWKNTSCVVHIAPVMGLGTRFTQFTAEMGAGAEASAPPAGIQRFV
FVLDGEVELRVNGETHRLAEYGYAYLPAGTDHSLCAQGGARVSVFEKKFHEQAAGLPAPQVVLGNERQITGTEFEGDPGL
IARKLLPDEPSFDFMVTTMSYAPGATLPYVEIHYMEHGLLMLEGEGIYRLGERYFQVTRGDVIWMGAHCPQWYGALGKQW
SKYLLYKDMNRHPLELRSPADRAARGAF

Sequences:

>Translated_268_residues
MNRQPSLQQLGQTRSVVSQEYALLTPETFIRTTLAEWKNTSCVVHIAPVMGLGTRFTQFTAEMGAGAEASAPPAGIQRFV
FVLDGEVELRVNGETHRLAEYGYAYLPAGTDHSLCAQGGARVSVFEKKFHEQAAGLPAPQVVLGNERQITGTEFEGDPGL
IARKLLPDEPSFDFMVTTMSYAPGATLPYVEIHYMEHGLLMLEGEGIYRLGERYFQVTRGDVIWMGAHCPQWYGALGKQW
SKYLLYKDMNRHPLELRSPADRAARGAF
>Mature_268_residues
MNRQPSLQQLGQTRSVVSQEYALLTPETFIRTTLAEWKNTSCVVHIAPVMGLGTRFTQFTAEMGAGAEASAPPAGIQRFV
FVLDGEVELRVNGETHRLAEYGYAYLPAGTDHSLCAQGGARVSVFEKKFHEQAAGLPAPQVVLGNERQITGTEFEGDPGL
IARKLLPDEPSFDFMVTTMSYAPGATLPYVEIHYMEHGLLMLEGEGIYRLGERYFQVTRGDVIWMGAHCPQWYGALGKQW
SKYLLYKDMNRHPLELRSPADRAARGAF

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=246, Percent_Identity=29.6747967479675, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 29775; Mature: 29775

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQPSLQQLGQTRSVVSQEYALLTPETFIRTTLAEWKNTSCVVHIAPVMGLGTRFTQFT
CCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCEEEEEECCHHCCCHHHHHHH
AEMGAGAEASAPPAGIQRFVFVLDGEVELRVNGETHRLAEYGYAYLPAGTDHSLCAQGGA
HHHCCCCCCCCCHHHHEEEEEEECCEEEEEECCCHHHHHHCCEEEECCCCCCHHHHCCCC
RVSVFEKKFHEQAAGLPAPQVVLGNERQITGTEFEGDPGLIARKLLPDEPSFDFMVTTMS
EEHHHHHHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEC
YAPGATLPYVEIHYMEHGLLMLEGEGIYRLGERYFQVTRGDVIWMGAHCPQWYGALGKQW
CCCCCCCCEEEEEEEECCEEEEECCCHHHHHHHHHEEECCCEEEECCCCCHHHHHHHHHH
SKYLLYKDMNRHPLELRSPADRAARGAF
HHHHHHHCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MNRQPSLQQLGQTRSVVSQEYALLTPETFIRTTLAEWKNTSCVVHIAPVMGLGTRFTQFT
CCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCEEEEEECCHHCCCHHHHHHH
AEMGAGAEASAPPAGIQRFVFVLDGEVELRVNGETHRLAEYGYAYLPAGTDHSLCAQGGA
HHHCCCCCCCCCHHHHEEEEEEECCEEEEEECCCHHHHHHCCEEEECCCCCCHHHHCCCC
RVSVFEKKFHEQAAGLPAPQVVLGNERQITGTEFEGDPGLIARKLLPDEPSFDFMVTTMS
EEHHHHHHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEEC
YAPGATLPYVEIHYMEHGLLMLEGEGIYRLGERYFQVTRGDVIWMGAHCPQWYGALGKQW
CCCCCCCCEEEEEEEECCEEEEECCCHHHHHHHHHEEECCCEEEECCCCCHHHHHHHHHH
SKYLLYKDMNRHPLELRSPADRAARGAF
HHHHHHHCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]