| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94971912
Identifier: 94971912
GI number: 94971912
Start: 39552
End: 40544
Strand: Direct
Name: 94971912
Synonym: Dgeo_2444
Alternate gene names: NA
Gene position: 39552-40544 (Clockwise)
Preceding gene: 94971913
Following gene: 94971911
Centisome position: 6.89
GC content: 61.33
Gene sequence:
>993_bases ATGAAGCCCTTCACCGCCCTGGCTCTTCTCGGTCTTTCCCTCACCAGTGCTGCCCTTGCTGCGCCAAAAGACCCGGTTCA GTTCGCGGTGTTCCTGGAGCAGATGCGCGGTCACTACGACGCCAGCCTGCTGAACTACCGCAACGGTGACCTGACGCTGG CGGCGAAGCATGCCAAGCACCCAGCCAACGAGCTGTACGCGGCAGTGCGCAGCGACTTAACGCCTGCCTTGCAGCAGAAG TTCCTGGCCGATTACGCCCACATCAACCAAACGCTGGCCTTGAAAAAGCCTTACGTTGAGTACCAGAAGGTCGTGAATGC TTTCTACGCCGATGTGGATGCGGCGTTGGCAACCCTGGGCGCTACCCGGAACGATCCGAAGTTCGCCGCGCAGGTGATCG CCCAGATTCTGGAAGATGCCGAGCAAGAGTACGAGGAAGGAGTGGAGGGCGGCAGAGTCATCAACCTCGCCGAGTACCAA GATGCCATCTACTACGTGGCCCGCGCCCGAAGCTGGTTTGACCGGAACGCCCGCGGTTTCCCTCAGCGCCAACGGGACGT GACAGCCCAGGCGCTGCGTGACACCGCTGCCGTCATTGCCCGCAAGGGAGACCTCAAGGCCCTGGAGAAGGCCATTGACC GGGCCAAGGTGGAACTCTCGGAGATCAGCGGCGTGCAGCAGGCTGCAAAGAGCAGCAACGCAACCTACTTTGCCAACATC GACCGACTCCTTGCTGCGGCCAAGGCGCACTACGCGGGCGGAATGGCTGATGATGCTGAAGAAGCCCTCATTGACGCCTA CCTGGAGAACTTCGAGTACTTGGAAAGTCCTCTGGCCAAACAGGATCGGGCTCTGGAGACAAAGCTCGAAAAGACCCTGC GCGAGGACTTGCGTGCCCTCCTGAAGAGCCAGCCCAGCGCGCAGAAGTTCAATGCAGCGGTCGACGCCGCCCTCGCCGAC CTGAAAAAGGCCCGCGCCCTGCTGGGGGAGTAA
Upstream 100 bases:
>100_bases CGGAATCTGCCAGCCTCGCCCCAGGCAAAATGGAGCGAAATACATAGAATTCCGACTGGAATAGTTGACTTAAAGGAATG GACTTCTTAGAGTTTGCGGC
Downstream 100 bases:
>100_bases GTCATGTACCGGTGCCTGATCCTGCTCCTGACCTTGCTAGGTGTGGCCCTGGCGGCACCGGAGCGGGTGGACGTGACGGC AGAGCTGCGCACAGCACACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKPFTALALLGLSLTSAALAAPKDPVQFAVFLEQMRGHYDASLLNYRNGDLTLAAKHAKHPANELYAAVRSDLTPALQQK FLADYAHINQTLALKKPYVEYQKVVNAFYADVDAALATLGATRNDPKFAAQVIAQILEDAEQEYEEGVEGGRVINLAEYQ DAIYYVARARSWFDRNARGFPQRQRDVTAQALRDTAAVIARKGDLKALEKAIDRAKVELSEISGVQQAAKSSNATYFANI DRLLAAAKAHYAGGMADDAEEALIDAYLENFEYLESPLAKQDRALETKLEKTLREDLRALLKSQPSAQKFNAAVDAALAD LKKARALLGE
Sequences:
>Translated_330_residues MKPFTALALLGLSLTSAALAAPKDPVQFAVFLEQMRGHYDASLLNYRNGDLTLAAKHAKHPANELYAAVRSDLTPALQQK FLADYAHINQTLALKKPYVEYQKVVNAFYADVDAALATLGATRNDPKFAAQVIAQILEDAEQEYEEGVEGGRVINLAEYQ DAIYYVARARSWFDRNARGFPQRQRDVTAQALRDTAAVIARKGDLKALEKAIDRAKVELSEISGVQQAAKSSNATYFANI DRLLAAAKAHYAGGMADDAEEALIDAYLENFEYLESPLAKQDRALETKLEKTLREDLRALLKSQPSAQKFNAAVDAALAD LKKARALLGE >Mature_330_residues MKPFTALALLGLSLTSAALAAPKDPVQFAVFLEQMRGHYDASLLNYRNGDLTLAAKHAKHPANELYAAVRSDLTPALQQK FLADYAHINQTLALKKPYVEYQKVVNAFYADVDAALATLGATRNDPKFAAQVIAQILEDAEQEYEEGVEGGRVINLAEYQ DAIYYVARARSWFDRNARGFPQRQRDVTAQALRDTAAVIARKGDLKALEKAIDRAKVELSEISGVQQAAKSSNATYFANI DRLLAAAKAHYAGGMADDAEEALIDAYLENFEYLESPLAKQDRALETKLEKTLREDLRALLKSQPSAQKFNAAVDAALAD LKKARALLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36249; Mature: 36249
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPFTALALLGLSLTSAALAAPKDPVQFAVFLEQMRGHYDASLLNYRNGDLTLAAKHAKH CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEHHHCC PANELYAAVRSDLTPALQQKFLADYAHINQTLALKKPYVEYQKVVNAFYADVDAALATLG CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC ATRNDPKFAAQVIAQILEDAEQEYEEGVEGGRVINLAEYQDAIYYVARARSWFDRNARGF CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCC PQRQRDVTAQALRDTAAVIARKGDLKALEKAIDRAKVELSEISGVQQAAKSSNATYFANI CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH DRLLAAAKAHYAGGMADDAEEALIDAYLENFEYLESPLAKQDRALETKLEKTLREDLRAL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSQPSAQKFNAAVDAALADLKKARALLGE HHCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPFTALALLGLSLTSAALAAPKDPVQFAVFLEQMRGHYDASLLNYRNGDLTLAAKHAKH CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCEEEEEHHHCC PANELYAAVRSDLTPALQQKFLADYAHINQTLALKKPYVEYQKVVNAFYADVDAALATLG CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC ATRNDPKFAAQVIAQILEDAEQEYEEGVEGGRVINLAEYQDAIYYVARARSWFDRNARGF CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCC PQRQRDVTAQALRDTAAVIARKGDLKALEKAIDRAKVELSEISGVQQAAKSSNATYFANI CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHH DRLLAAAKAHYAGGMADDAEEALIDAYLENFEYLESPLAKQDRALETKLEKTLREDLRAL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKSQPSAQKFNAAVDAALADLKKARALLGE HHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA