Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

Click here to switch to the map view.

The map label for this gene is 94971913

Identifier: 94971913

GI number: 94971913

Start: 38439

End: 39047

Strand: Direct

Name: 94971913

Synonym: Dgeo_2445

Alternate gene names: NA

Gene position: 38439-39047 (Clockwise)

Preceding gene: 94971914

Following gene: 94971912

Centisome position: 6.7

GC content: 59.28

Gene sequence:

>609_bases
ATGCAGCCACTACCGAATCCCGTAGACCTCGTGATAGACGCGAACGAAGGGCAGCTCGCGTCCCGCTTTCGGGATGCTGG
TCAGGTCCACGCACAGACGCAAACGAGGATGATGTTTGCGCCGTGCCGCGAGGAGCAGGGCGTCCCATTGGGCCTGGACC
AGGGTCGCCCAGCAGGCCGCCGTATCCCACTCATACACGTTCAGCAGGCGACTCAGCGCACTGGCACTGACGGTCTGGGC
GCGGTGCAACGCTTTTTTCGTCTTCAGGTCGAGAAAGAGGCCCAGCGCAGCCTCCAGGCTGCGCTGTTGATACGGACTGG
TGGGAACAGAGAGCAGCGCGTCTGCCAGAATGGACGCGCGCTCCCCGCGAAGCTTGAGGTCATACACACCCTCTTTCTCG
CGTCTGGGAGCGCTTTTTCGCTACCTCTTCAGGTGCAAGTTCTGAGAAATCCCTACGACAATGCCAAGATGGAGAGCTTC
TACAAGACCCTGAAGAACGAGGAGGTCGATCTGCAAGAGTACGTGGATTTGGACGATGCACGGCGGCACATCGATTTCTT
TATTGCGGACCTGTACAACCACCGCCGACTGCACTCCAGCCTGGGATAA

Upstream 100 bases:

>100_bases
TAGGTCGGCTGGTCCGCAAGTCGTTGTCCTTCTCAAAGTCCGACGAGATGCTCGAAGCGAGCCTGACCCTCGCCTTCCAT
CGCTACAACCTGTCACGTTG

Downstream 100 bases:

>100_bases
GTCCCACCTGCCGAGTTTGCCGCCCGTTACACTGCTGCCCAGACGTGACTTGCCCCGCGGTCCGCTGAATAGGGTTCACT
CCACGGGGAGACAGAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MQPLPNPVDLVIDANEGQLASRFRDAGQVHAQTQTRMMFAPCREEQGVPLGLDQGRPAGRRIPLIHVQQATQRTGTDGLG
AVQRFFRLQVEKEAQRSLQAALLIRTGGNREQRVCQNGRALPAKLEVIHTLFLASGSAFSLPLQVQVLRNPYDNAKMESF
YKTLKNEEVDLQEYVDLDDARRHIDFFIADLYNHRRLHSSLG

Sequences:

>Translated_202_residues
MQPLPNPVDLVIDANEGQLASRFRDAGQVHAQTQTRMMFAPCREEQGVPLGLDQGRPAGRRIPLIHVQQATQRTGTDGLG
AVQRFFRLQVEKEAQRSLQAALLIRTGGNREQRVCQNGRALPAKLEVIHTLFLASGSAFSLPLQVQVLRNPYDNAKMESF
YKTLKNEEVDLQEYVDLDDARRHIDFFIADLYNHRRLHSSLG
>Mature_202_residues
MQPLPNPVDLVIDANEGQLASRFRDAGQVHAQTQTRMMFAPCREEQGVPLGLDQGRPAGRRIPLIHVQQATQRTGTDGLG
AVQRFFRLQVEKEAQRSLQAALLIRTGGNREQRVCQNGRALPAKLEVIHTLFLASGSAFSLPLQVQVLRNPYDNAKMESF
YKTLKNEEVDLQEYVDLDDARRHIDFFIADLYNHRRLHSSLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22814; Mature: 22814

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPLPNPVDLVIDANEGQLASRFRDAGQVHAQTQTRMMFAPCREEQGVPLGLDQGRPAGR
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCC
RIPLIHVQQATQRTGTDGLGAVQRFFRLQVEKEAQRSLQAALLIRTGGNREQRVCQNGRA
CCCEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCC
LPAKLEVIHTLFLASGSAFSLPLQVQVLRNPYDNAKMESFYKTLKNEEVDLQEYVDLDDA
CHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHCCHHHH
RRHIDFFIADLYNHRRLHSSLG
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQPLPNPVDLVIDANEGQLASRFRDAGQVHAQTQTRMMFAPCREEQGVPLGLDQGRPAGR
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCC
RIPLIHVQQATQRTGTDGLGAVQRFFRLQVEKEAQRSLQAALLIRTGGNREQRVCQNGRA
CCCEEEECHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCC
LPAKLEVIHTLFLASGSAFSLPLQVQVLRNPYDNAKMESFYKTLKNEEVDLQEYVDLDDA
CHHHHHHHHHHHHHCCCCEECCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHCCHHHH
RRHIDFFIADLYNHRRLHSSLG
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA