| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is ywbL [H]
Identifier: 94971911
GI number: 94971911
Start: 40548
End: 41747
Strand: Direct
Name: ywbL [H]
Synonym: Dgeo_2443
Alternate gene names: 94971911
Gene position: 40548-41747 (Clockwise)
Preceding gene: 94971912
Following gene: 94971910
Centisome position: 7.06
GC content: 64.92
Gene sequence:
>1200_bases ATGTACCGGTGCCTGATCCTGCTCCTGACCTTGCTAGGTGTGGCCCTGGCGGCACCGGAGCGGGTGGACGTGACGGCAGA GCTGCGCACAGCACACGACCTCGTGGCGCAGAGCCTGCGTGAGTACGCGGCGGGCAAGCGCGAGGACGCCTTCAAGACGG CCCGCTCGGCGTACCTCGATCACTTCGAATACGCCGAGCCGCCGCTGCGTGTCCTGAACCCGGACCTGATCCTCGAGACG GAGTACCGCTTTGCAGACCTGCGCAACGGCATGAAAAATGGGGCGAGCCTCGGCGAGCTGCGGGAGATTGCGGGCGACAT CGATGACAGCTTGCGCAAGGCTGAGAGCATCGTCAACGGCACGGGTGTCCTGGCTCCGACCCTTGCGGCGACCGGTGGCT TCACCATCCTTTTTCGTGAGGGCCTGGAGGCCGCTCTACTGATGGCGGCCATTCTCGCCTACCTGGCCAGCACCCGCAAT GACCGCTTGCGGGGTGGAGTCTGGTGGGGTGCGGGGGCCGCCCTTCTTGCCACCGCCCTCACGTGGGTTGCCGCCACCTA CCTGCTGTCCATCGCCCCCATCTCGCGCGAGCTGATCAGCGCAATCACCAGTGTCATTGCCGTGGTGATCTTGTTCTACC TTTCCTTCTGGATGCTCCAGCAGGGGGACCGCCGGCGCAGCGCGGAGTTTATGCGGGTGCGCGTCTCGCAGGCCGTGCAG AGTGGCAGCCTGGGTGCCGTGGCATTGGTCACCTTTACGACCATCTACCGCGAGGGCTTCGAGACGGTGCTGTTCTACCA GGCGCTTGCGGTCGCAAGTGGCCCGGTCCTGGGGTACATGTACCTGGGCATTGCGCTGGCCGTTCTTGCGCTGGTGGCCG TGTTTGCGCTGATCTTCCGTCTGGGACAGCGGGTGCCCACCCAGCGCCTCTTCCCGCTGCTGGTCACAGTCACGGCGCTT TTTGCCGTCGCCTTTGTGGGCAATGGTGTGCGTGCCTTTCAGGAGGCCGGCTGGCTGCCGGTGACCAACCTGTACGGAAA GGTCCCAGTCTTGGACCCCAACGTTGCGGCCCTAACCGGCTTACATCCTACGGTCGAAACGCTGGCAGCGCAGCTGCTGA TGGTTCTGGTGTACGTCGTGGGTGTTATTGTGTTCCGCCTGCGCACACAGCGCCGGGCGGAGCGCGGAGCACACACGTGA
Upstream 100 bases:
>100_bases CCTCCTGAAGAGCCAGCCCAGCGCGCAGAAGTTCAATGCAGCGGTCGACGCCGCCCTCGCCGACCTGAAAAAGGCCCGCG CCCTGCTGGGGGAGTAAGTC
Downstream 100 bases:
>100_bases TGGCGGAGGCTCAGCGTTGACCGCGGCTACAGATCCCCCGGGGTCCATTCCGGTGCGGATTGGCATCGATGTGGGCGGCA CCTTTACCAAGGGTGTCGCT
Product: iron permease FTR1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MYRCLILLLTLLGVALAAPERVDVTAELRTAHDLVAQSLREYAAGKREDAFKTARSAYLDHFEYAEPPLRVLNPDLILET EYRFADLRNGMKNGASLGELREIAGDIDDSLRKAESIVNGTGVLAPTLAATGGFTILFREGLEAALLMAAILAYLASTRN DRLRGGVWWGAGAALLATALTWVAATYLLSIAPISRELISAITSVIAVVILFYLSFWMLQQGDRRRSAEFMRVRVSQAVQ SGSLGAVALVTFTTIYREGFETVLFYQALAVASGPVLGYMYLGIALAVLALVAVFALIFRLGQRVPTQRLFPLLVTVTAL FAVAFVGNGVRAFQEAGWLPVTNLYGKVPVLDPNVAALTGLHPTVETLAAQLLMVLVYVVGVIVFRLRTQRRAERGAHT
Sequences:
>Translated_399_residues MYRCLILLLTLLGVALAAPERVDVTAELRTAHDLVAQSLREYAAGKREDAFKTARSAYLDHFEYAEPPLRVLNPDLILET EYRFADLRNGMKNGASLGELREIAGDIDDSLRKAESIVNGTGVLAPTLAATGGFTILFREGLEAALLMAAILAYLASTRN DRLRGGVWWGAGAALLATALTWVAATYLLSIAPISRELISAITSVIAVVILFYLSFWMLQQGDRRRSAEFMRVRVSQAVQ SGSLGAVALVTFTTIYREGFETVLFYQALAVASGPVLGYMYLGIALAVLALVAVFALIFRLGQRVPTQRLFPLLVTVTAL FAVAFVGNGVRAFQEAGWLPVTNLYGKVPVLDPNVAALTGLHPTVETLAAQLLMVLVYVVGVIVFRLRTQRRAERGAHT >Mature_399_residues MYRCLILLLTLLGVALAAPERVDVTAELRTAHDLVAQSLREYAAGKREDAFKTARSAYLDHFEYAEPPLRVLNPDLILET EYRFADLRNGMKNGASLGELREIAGDIDDSLRKAESIVNGTGVLAPTLAATGGFTILFREGLEAALLMAAILAYLASTRN DRLRGGVWWGAGAALLATALTWVAATYLLSIAPISRELISAITSVIAVVILFYLSFWMLQQGDRRRSAEFMRVRVSQAVQ SGSLGAVALVTFTTIYREGFETVLFYQALAVASGPVLGYMYLGIALAVLALVAVFALIFRLGQRVPTQRLFPLLVTVTAL FAVAFVGNGVRAFQEAGWLPVTNLYGKVPVLDPNVAALTGLHPTVETLAAQLLMVLVYVVGVIVFRLRTQRRAERGAHT
Specific function: Unknown
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 43346; Mature: 43346
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRCLILLLTLLGVALAAPERVDVTAELRTAHDLVAQSLREYAAGKREDAFKTARSAYLD CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH HFEYAEPPLRVLNPDLILETEYRFADLRNGMKNGASLGELREIAGDIDDSLRKAESIVNG HHHCCCCCHHHCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC TGVLAPTLAATGGFTILFREGLEAALLMAAILAYLASTRNDRLRGGVWWGAGAALLATAL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH TWVAATYLLSIAPISRELISAITSVIAVVILFYLSFWMLQQGDRRRSAEFMRVRVSQAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SGSLGAVALVTFTTIYREGFETVLFYQALAVASGPVLGYMYLGIALAVLALVAVFALIFR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGQRVPTQRLFPLLVTVTALFAVAFVGNGVRAFQEAGWLPVTNLYGKVPVLDPNVAALTG HHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHC LHPTVETLAAQLLMVLVYVVGVIVFRLRTQRRAERGAHT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYRCLILLLTLLGVALAAPERVDVTAELRTAHDLVAQSLREYAAGKREDAFKTARSAYLD CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH HFEYAEPPLRVLNPDLILETEYRFADLRNGMKNGASLGELREIAGDIDDSLRKAESIVNG HHHCCCCCHHHCCCCEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC TGVLAPTLAATGGFTILFREGLEAALLMAAILAYLASTRNDRLRGGVWWGAGAALLATAL CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH TWVAATYLLSIAPISRELISAITSVIAVVILFYLSFWMLQQGDRRRSAEFMRVRVSQAVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SGSLGAVALVTFTTIYREGFETVLFYQALAVASGPVLGYMYLGIALAVLALVAVFALIFR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGQRVPTQRLFPLLVTVTALFAVAFVGNGVRAFQEAGWLPVTNLYGKVPVLDPNVAALTG HHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHC LHPTVETLAAQLLMVLVYVVGVIVFRLRTQRRAERGAHT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]