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The map label for this gene is fliO [H]

Identifier: 94314219

GI number: 94314219

Start: 2002650

End: 2003210

Strand: Direct

Name: fliO [H]

Synonym: Rmet_5300

Alternate gene names: 94314219

Gene position: 2002650-2003210 (Clockwise)

Preceding gene: 94314218

Following gene: 94314220

Centisome position: 77.62

GC content: 67.91

Gene sequence:

>561_bases
ATGATGGTTGCCGCGCGCCGGCTTGCCGCGGGCATTGCCCTTGCGGGCGTTGCCGCTTCCGGCGCGCAGGCTGCCGACGT
CGTACTCAGCACGGCCCAGGCGGGCATGCCCACCGGCGGCGCCGCGACCAACACCACTACCAGCGCCACTACTAGCAACA
CCGGCGCCAACGCTCCCGTCATCAGCAGTGGGGCCAGCCTGGCGCAAGCCGGTCTGGGCCTGTTCGCCGTCATCGCGCTG
ATCCTGGCGATGGCATGGGTGGCGCGGCGCGTCGGCCTGGTGCGCCAGGGCTCGGGCAATGCGTCGATGAAGGTGGTCGG
CAGCCTGATGCTTGGTCCGCGCCAGAGGGTGGTCACGGTGGAAGTGGGCGGTACCTGGCTGGTGCTTGGTGTGTCGCCCA
ATGAAATCCGTCCGCTTCACACGCTGGAAGCACAACCGCACACCGGTTCTCCGGACGATTCGCGGCCGGGCTCCCAGGCG
GACTCAGGAGTGTCCCGGAACATGCAGGGCGGATTCGGCGAGCGACTGATGCGCGCCATGCAGGAAAACCTCAAGAAATG
A

Upstream 100 bases:

>100_bases
ACCTGATCGCCCAGGGCGAAGTGGTGGTGGTCAATGACAAGTTCGGCATCCGCCTGACGGACATCATCACGCCGTCGGAA
CGTATCCGGAAGCTCAACAA

Downstream 100 bases:

>100_bases
ACTCGCTGCGTGCCGACGTCGCACGGCATCCCGCGCGCCTGCCGCGCGTGGCCGCCACCCTGCTGGCATTGCTGCCGCTC
GTGCTGTGGCTCGCGCCCGA

Product: flagellar biosynthesis protein, FliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MMVAARRLAAGIALAGVAASGAQAADVVLSTAQAGMPTGGAATNTTTSATTSNTGANAPVISSGASLAQAGLGLFAVIAL
ILAMAWVARRVGLVRQGSGNASMKVVGSLMLGPRQRVVTVEVGGTWLVLGVSPNEIRPLHTLEAQPHTGSPDDSRPGSQA
DSGVSRNMQGGFGERLMRAMQENLKK

Sequences:

>Translated_186_residues
MMVAARRLAAGIALAGVAASGAQAADVVLSTAQAGMPTGGAATNTTTSATTSNTGANAPVISSGASLAQAGLGLFAVIAL
ILAMAWVARRVGLVRQGSGNASMKVVGSLMLGPRQRVVTVEVGGTWLVLGVSPNEIRPLHTLEAQPHTGSPDDSRPGSQA
DSGVSRNMQGGFGERLMRAMQENLKK
>Mature_186_residues
MMVAARRLAAGIALAGVAASGAQAADVVLSTAQAGMPTGGAATNTTTSATTSNTGANAPVISSGASLAQAGLGLFAVIAL
ILAMAWVARRVGLVRQGSGNASMKVVGSLMLGPRQRVVTVEVGGTWLVLGVSPNEIRPLHTLEAQPHTGSPDDSRPGSQA
DSGVSRNMQGGFGERLMRAMQENLKK

Specific function: Required for both, motility and virulence [H]

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliO/mopB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022781 [H]

Pfam domain/function: PF04347 FliO [H]

EC number: NA

Molecular weight: Translated: 18717; Mature: 18717

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVAARRLAAGIALAGVAASGAQAADVVLSTAQAGMPTGGAATNTTTSATTSNTGANAPV
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
ISSGASLAQAGLGLFAVIALILAMAWVARRVGLVRQGSGNASMKVVGSLMLGPRQRVVTV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCEEEEE
EVGGTWLVLGVSPNEIRPLHTLEAQPHTGSPDDSRPGSQADSGVSRNMQGGFGERLMRAM
EECCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QENLKK
HHHHCC
>Mature Secondary Structure
MMVAARRLAAGIALAGVAASGAQAADVVLSTAQAGMPTGGAATNTTTSATTSNTGANAPV
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE
ISSGASLAQAGLGLFAVIALILAMAWVARRVGLVRQGSGNASMKVVGSLMLGPRQRVVTV
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCEEEEE
EVGGTWLVLGVSPNEIRPLHTLEAQPHTGSPDDSRPGSQADSGVSRNMQGGFGERLMRAM
EECCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
QENLKK
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8412685 [H]