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The map label for this gene is fliP [H]

Identifier: 94314220

GI number: 94314220

Start: 2003207

End: 2004001

Strand: Direct

Name: fliP [H]

Synonym: Rmet_5301

Alternate gene names: 94314220

Gene position: 2003207-2004001 (Clockwise)

Preceding gene: 94314219

Following gene: 94314221

Centisome position: 77.64

GC content: 65.53

Gene sequence:

>795_bases
ATGAACTCGCTGCGTGCCGACGTCGCACGGCATCCCGCGCGCCTGCCGCGCGTGGCCGCCACCCTGCTGGCATTGCTGCC
GCTCGTGCTGTGGCTCGCGCCCGAATCGGCGCTGGCCCAGTCGCTGCCCGGCGTGACCAGCCGGCCGGGACCCGGCGGCG
GCCAGACCTGGTCGCTGTCGATCCAGACGCTGGTCCTGTTGACATCGCTGTCGTTCCTGCCGGCGGCCATGCTGATGATG
ACGGGCTTCACTCGCATCATCATCGTGCTGGGCCTGTTGCGCAACGCGCTGGGTACGGCATCGTCGCCGCCCAACCAGGT
ACTCGTGGGCCTGTCGCTGTTCCTGACGTTCTTCGTCATGTCGCCGGTGTTCGACAAGGTCTACACCGACGCCTACCAGC
CGCTCTCCGAAAACAAGATCAGCCTCGAGACCGCCGCCCAGCGCGCCGCCGTGCCGCTGCGCGCGTTCATGCTGCGTCAG
ACTCGCGAGAAGGACCTGGCGATGTTCGCGCAGATGGCCAAAACGCCCGAACTGCAGGGCCCCGAGGACGTGCCGTTCAC
GGTGCTGGTGCCGGCGTTCGTCACCAGCGAACTGAAGACCGCGTTTCAGATCGGCTTTACGATCTTCATCCCGTTCCTCA
TCATCGACCTCGTCGTGGCCAGCGTGCTGATGGCGATGGGCATGATGATGGTGCCACCCGCCACCATTTCGCTGCCGTTC
AAGCTGATGCTGTTCGTGCTGGTCGATGGCTGGCAACTGCTGCTGGGCTCCCTGGCGCAGAGCTTCATGAACTGA

Upstream 100 bases:

>100_bases
ATTCGCGGCCGGGCTCCCAGGCGGACTCAGGAGTGTCCCGGAACATGCAGGGCGGATTCGGCGAGCGACTGATGCGCGCC
ATGCAGGAAAACCTCAAGAA

Downstream 100 bases:

>100_bases
CCGGAGGCCCGCCATGACACCGGAAATGGTGATGACCATCGCCACGCAGGCGATGAAGATGACGCTGATGCTGGCCGCAC
CGCTTCTGCTGGTGGCGCTG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNSLRADVARHPARLPRVAATLLALLPLVLWLAPESALAQSLPGVTSRPGPGGGQTWSLSIQTLVLLTSLSFLPAAMLMM
TGFTRIIIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPVFDKVYTDAYQPLSENKISLETAAQRAAVPLRAFMLRQ
TREKDLAMFAQMAKTPELQGPEDVPFTVLVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPF
KLMLFVLVDGWQLLLGSLAQSFMN

Sequences:

>Translated_264_residues
MNSLRADVARHPARLPRVAATLLALLPLVLWLAPESALAQSLPGVTSRPGPGGGQTWSLSIQTLVLLTSLSFLPAAMLMM
TGFTRIIIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPVFDKVYTDAYQPLSENKISLETAAQRAAVPLRAFMLRQ
TREKDLAMFAQMAKTPELQGPEDVPFTVLVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPF
KLMLFVLVDGWQLLLGSLAQSFMN
>Mature_264_residues
MNSLRADVARHPARLPRVAATLLALLPLVLWLAPESALAQSLPGVTSRPGPGGGQTWSLSIQTLVLLTSLSFLPAAMLMM
TGFTRIIIVLGLLRNALGTASSPPNQVLVGLSLFLTFFVMSPVFDKVYTDAYQPLSENKISLETAAQRAAVPLRAFMLRQ
TREKDLAMFAQMAKTPELQGPEDVPFTVLVPAFVTSELKTAFQIGFTIFIPFLIIDLVVASVLMAMGMMMVPPATISLPF
KLMLFVLVDGWQLLLGSLAQSFMN

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=243, Percent_Identity=73.6625514403292, Blast_Score=358, Evalue=1e-100,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 28636; Mature: 28636

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]