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The map label for this gene is amnD [H]

Identifier: 94314130

GI number: 94314130

Start: 1905337

End: 1905774

Strand: Direct

Name: amnD [H]

Synonym: Rmet_5211

Alternate gene names: 94314130

Gene position: 1905337-1905774 (Clockwise)

Preceding gene: 94314129

Following gene: 94314131

Centisome position: 73.85

GC content: 63.01

Gene sequence:

>438_bases
ATGCAGGCAAACTCCGCTTCATCAGTGGTGGCCGGAAAGGCCACGCCACGCGGCACCTTTCCCCATGTGCGTCGCGCTGG
AGACTTCCTGTTCGTCTCGGGCACCAGCTCCCGCCGCGCCGACAATACCTTCGAGGGCGTCGAGGTGGATGCCATGGGTA
CGACCGCACTGGATATCCGCCGGCAAACCCGCGCTGTGATCGAGAACATTCGGGACATCCTGCGCAGCGTGGGCGCGGAC
CTGGAGGACGTGGTGGAAATCACCAGCTTCCTGGTGGATATGAACGACTTCGGTGGCTACAACGCGGTGTATGCCGAGTA
CTTCGGCTACGAAGGACCGACCCGCACGACCGTGGCCGTGCACCAGCTTCCGCATCCCCACCTGCGCATCGAGATCAAAG
CGATCGCCTACCGTCCGCTCACGTCCCAGGCAACATGA

Upstream 100 bases:

>100_bases
TTCGGCAACGATAGGCGCGCTTGGCCGCGCTTCTTTCCTGGCGGCATGACGCCATGCCTGCCCGGCTACCGGGCAGGCCT
TCACAACGAAAAGAGCAAAC

Downstream 100 bases:

>100_bases
AGAAAATCGATATGCATGCCCACTTCTTTCCGCGCATCACGCGGGAAGAAGCCGCCGCGCTGGACGCGGACAACGCGCCA
TGGCTCGCCGTCGACAGCGA

Product: 2-aminomuconate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQANSASSVVAGKATPRGTFPHVRRAGDFLFVSGTSSRRADNTFEGVEVDAMGTTALDIRRQTRAVIENIRDILRSVGAD
LEDVVEITSFLVDMNDFGGYNAVYAEYFGYEGPTRTTVAVHQLPHPHLRIEIKAIAYRPLTSQAT

Sequences:

>Translated_145_residues
MQANSASSVVAGKATPRGTFPHVRRAGDFLFVSGTSSRRADNTFEGVEVDAMGTTALDIRRQTRAVIENIRDILRSVGAD
LEDVVEITSFLVDMNDFGGYNAVYAEYFGYEGPTRTTVAVHQLPHPHLRIEIKAIAYRPLTSQAT
>Mature_145_residues
MQANSASSVVAGKATPRGTFPHVRRAGDFLFVSGTSSRRADNTFEGVEVDAMGTTALDIRRQTRAVIENIRDILRSVGAD
LEDVVEITSFLVDMNDFGGYNAVYAEYFGYEGPTRTTVAVHQLPHPHLRIEIKAIAYRPLTSQAT

Specific function: Involved in the modified meta-cleavage pathway for the 2-aminophenol catabolism. Only active toward 2-aminomuconic acid [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2-aminomuconate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI87082213, Length=89, Percent_Identity=35.9550561797753, Blast_Score=65, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320899, Length=113, Percent_Identity=33.6283185840708, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: =3.5.99.5 [H]

Molecular weight: Translated: 15889; Mature: 15889

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQANSASSVVAGKATPRGTFPHVRRAGDFLFVSGTSSRRADNTFEGVEVDAMGTTALDIR
CCCCCCCCEEECCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHH
RQTRAVIENIRDILRSVGADLEDVVEITSFLVDMNDFGGYNAVYAEYFGYEGPTRTTVAV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEE
HQLPHPHLRIEIKAIAYRPLTSQAT
ECCCCCCEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MQANSASSVVAGKATPRGTFPHVRRAGDFLFVSGTSSRRADNTFEGVEVDAMGTTALDIR
CCCCCCCCEEECCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCCHHHHHH
RQTRAVIENIRDILRSVGADLEDVVEITSFLVDMNDFGGYNAVYAEYFGYEGPTRTTVAV
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEE
HQLPHPHLRIEIKAIAYRPLTSQAT
ECCCCCCEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9169437; 11081795 [H]