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The map label for this gene is kipR [H]

Identifier: 94314076

GI number: 94314076

Start: 1855912

End: 1856724

Strand: Direct

Name: kipR [H]

Synonym: Rmet_5157

Alternate gene names: 94314076

Gene position: 1855912-1856724 (Clockwise)

Preceding gene: 94314070

Following gene: 94314077

Centisome position: 71.93

GC content: 65.44

Gene sequence:

>813_bases
GTGACATCACTGCCACCTACCGCACCCGTCACGGCGGGCGAGAGCGAAGGCGAACAGGAAGGTCGCCTGGTGAGCGCGCT
CGCACGCGGCATCGGCATCCTTGGCTGCTTTTCGACCACCGTCCAGGAACTGTCCGGCAAGGAACTGATGGAGCTGACGG
GTCTGCCCAAGCCCACGCTGTTCCGCCTGCTCGACACGCTGTGCGAACTCGGCCTGCTGCGCTATTCCGAGCGGCTATCG
AAATACGTGCCCGGACTCGGCCTGCTGAACCTGGCCGCGCCGACGCTCGCCCGCATGACGATCCGCCAGCTGGCCCGCCC
TCTGATGCAGGAACTGGCAGACCACATCGAAGGACAAGTCCAGCTACTCGCGGGGATTGGCACCAATCTGAGCTACGTCG
AAGTGGCGCAGGGTGCAGGTTCGCAGTTGTTCCGCTCTGAAATCGGGATGCGCGTCTCGCTGTCGCGCGCGGCATCCGGC
CGGGCGTACCTGTTGATGCTGTCCGAGTCCGAACGCAAGGCGTGGCTCGACGGCTTCGCGCGGCGCGACCCATCGCGCAA
GGAATGGCTCGACGAGCGCCTTGCCACGGCACAACGCGATCTGAGCGAGCAAGGCTTCTCGCGCAGCTACGGCGACCTGC
ACCGCGAGATCGAAACCATCGCCGTGCCGATGCAGAAACGCCGCGATGGCGAAGCCTGGGTGCTCGCTGCCGCCGTGCCG
ATCTACAGCGAACAGTGCAAACGGCTAAAGGAAGACCTCGGCCCGCGCCTGCTGACGCTCATGCGCAATGTGGAGGCATC
GCTGGGCGCATAG

Upstream 100 bases:

>100_bases
GAAATTTCTCTTGACCGACTCTTTTTTTGAATTGCAGAATAGAATTTATGAGACACAAGTGCCGAAAAACAGCGACATCG
ATGGACCGGGAGCATCTGAA

Downstream 100 bases:

>100_bases
CGTCGCAATAGAATACAAAACCAACAGGAGGAGACGACCTGTTATGACAACACTGCACGACTGGGCAACCGTGGCGCCGC
AAAAGCCAGCATTGATCCAG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Kip operon repressor protein [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MTSLPPTAPVTAGESEGEQEGRLVSALARGIGILGCFSTTVQELSGKELMELTGLPKPTLFRLLDTLCELGLLRYSERLS
KYVPGLGLLNLAAPTLARMTIRQLARPLMQELADHIEGQVQLLAGIGTNLSYVEVAQGAGSQLFRSEIGMRVSLSRAASG
RAYLLMLSESERKAWLDGFARRDPSRKEWLDERLATAQRDLSEQGFSRSYGDLHREIETIAVPMQKRRDGEAWVLAAAVP
IYSEQCKRLKEDLGPRLLTLMRNVEASLGA

Sequences:

>Translated_270_residues
MTSLPPTAPVTAGESEGEQEGRLVSALARGIGILGCFSTTVQELSGKELMELTGLPKPTLFRLLDTLCELGLLRYSERLS
KYVPGLGLLNLAAPTLARMTIRQLARPLMQELADHIEGQVQLLAGIGTNLSYVEVAQGAGSQLFRSEIGMRVSLSRAASG
RAYLLMLSESERKAWLDGFARRDPSRKEWLDERLATAQRDLSEQGFSRSYGDLHREIETIAVPMQKRRDGEAWVLAAAVP
IYSEQCKRLKEDLGPRLLTLMRNVEASLGA
>Mature_269_residues
TSLPPTAPVTAGESEGEQEGRLVSALARGIGILGCFSTTVQELSGKELMELTGLPKPTLFRLLDTLCELGLLRYSERLSK
YVPGLGLLNLAAPTLARMTIRQLARPLMQELADHIEGQVQLLAGIGTNLSYVEVAQGAGSQLFRSEIGMRVSLSRAASGR
AYLLMLSESERKAWLDGFARRDPSRKEWLDERLATAQRDLSEQGFSRSYGDLHREIETIAVPMQKRRDGEAWVLAAAVPI
YSEQCKRLKEDLGPRLLTLMRNVEASLGA

Specific function: Transcriptional repressor of the kip gene-containing operon [H]

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29684; Mature: 29552

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLPPTAPVTAGESEGEQEGRLVSALARGIGILGCFSTTVQELSGKELMELTGLPKPTL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH
FRLLDTLCELGLLRYSERLSKYVPGLGLLNLAAPTLARMTIRQLARPLMQELADHIEGQV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLAGIGTNLSYVEVAQGAGSQLFRSEIGMRVSLSRAASGRAYLLMLSESERKAWLDGFA
HHHHHCCCCCHHHHHHHCCCHHHHHHHCCCEEEHHHCCCCCEEEEEECCCHHHHHHHHHH
RRDPSRKEWLDERLATAQRDLSEQGFSRSYGDLHREIETIAVPMQKRRDGEAWVLAAAVP
HCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
IYSEQCKRLKEDLGPRLLTLMRNVEASLGA
HHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSLPPTAPVTAGESEGEQEGRLVSALARGIGILGCFSTTVQELSGKELMELTGLPKPTL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHH
FRLLDTLCELGLLRYSERLSKYVPGLGLLNLAAPTLARMTIRQLARPLMQELADHIEGQV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLLAGIGTNLSYVEVAQGAGSQLFRSEIGMRVSLSRAASGRAYLLMLSESERKAWLDGFA
HHHHHCCCCCHHHHHHHCCCHHHHHHHCCCEEEHHHCCCCCEEEEEECCCHHHHHHHHHH
RRDPSRKEWLDERLATAQRDLSEQGFSRSYGDLHREIETIAVPMQKRRDGEAWVLAAAVP
HCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHH
IYSEQCKRLKEDLGPRLLTLMRNVEASLGA
HHHHHHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]