Click here to switch to the map view.

The map label for this gene is citA

Identifier: 94313194

GI number: 94313194

Start: 858751

End: 859548

Strand: Direct

Name: citA

Synonym: Rmet_4268

Alternate gene names: NA

Gene position: 858751-859548 (Clockwise)

Preceding gene: 94313193

Following gene: 94313195

Centisome position: 33.28

GC content: 62.53

Gene sequence:

>798_bases
GTGAAAGCATCGTCCCCAGATACAAAACCGCCGGCTACGGCAATCGCCTTTGTGGATATGCATGGTGTGTCGGTGCACGG
TCGCAACCTGAGTCGCGACCTGATCGGTCACATGGGCTTTACGGAATACTTTCTATTTCTGCTGACCAGCCGCGTACCAG
ACAGCGGGCTGGTGGCGATAACCAACGCTTGCCTGGTTGCTATTGCCGAGCATGGCTTGGTGCCATCAGTACAAGCAGCC
CGCATGACGCTGGCGGCTGCACCTGACGCCCTCCAGGGGGCAGTGGCGGCTGGATTGTTGGGATGCGGGTCGGTCATCCT
TGGCGCATCGCAAACCGCTGGGCTGATGCTGCAGGAAGTGTTGACGGCGCAGGGTGAGCGTTCCCTGGAGGAGAGTGCCG
ATACCGTGGTCGCGACCTTGCGTCGCGAGCGCAAGCCTTTGCCGGGATTCGGTCACCCGACGCACAAGGAAGGGGACCCA
CGCGCCCATCGCTTGCTGGAAGTTTCGCGAGAATTGGGTTTGGCCGGCAGGCATGTGGCGGCACTGGAGGCGGTTGCCGC
CGCAGTGCCCCGGCATTTTCCCCGCCCTATTCCGCTCAATGTATCGGGAGCAATCCCTGCCGTCCTGTTGGATGCTGGCT
ACCCTGTTGGGGCTCTCAAGGGCGTGCCGCTGCTGGCTCGCGTGGCCAGCCTGATCGCGCACCTGCAGGAGGAGACGCGT
CTGCCAATAGGCTTCGCGCTGGCTGATGCGGCTGAACATGCCGTTGCCTATATCGGGCCGGAGGTCTGCACAGCATGA

Upstream 100 bases:

>100_bases
CGTACGGTACGGAATATTTTTACTTGCATCGATAGAAAAGCAGTTCTAGTATATGCGCTATACGCAAAGCGTTGCGCATA
GCGCAAAAAAAGGAGGCAGG

Downstream 100 bases:

>100_bases
ACCCATCCGACAACCTGATCGAAGCTCAGGAGTTGTCGCCGCTGGAGGTGCTACGGCAATACCGCGCGCACGACTTCACG
CTGTCAGCGTTCCTGGCAGC

Product: citrate synthase

Products: citrate; CoA

Alternate protein names: 2-Methylcitrate Synthase/Citrate Synthase II PrpC/CitZ; Citryl-CoA Lyase; Citrate Synthase I

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKASSPDTKPPATAIAFVDMHGVSVHGRNLSRDLIGHMGFTEYFLFLLTSRVPDSGLVAITNACLVAIAEHGLVPSVQAA
RMTLAAAPDALQGAVAAGLLGCGSVILGASQTAGLMLQEVLTAQGERSLEESADTVVATLRRERKPLPGFGHPTHKEGDP
RAHRLLEVSRELGLAGRHVAALEAVAAAVPRHFPRPIPLNVSGAIPAVLLDAGYPVGALKGVPLLARVASLIAHLQEETR
LPIGFALADAAEHAVAYIGPEVCTA

Sequences:

>Translated_265_residues
MKASSPDTKPPATAIAFVDMHGVSVHGRNLSRDLIGHMGFTEYFLFLLTSRVPDSGLVAITNACLVAIAEHGLVPSVQAA
RMTLAAAPDALQGAVAAGLLGCGSVILGASQTAGLMLQEVLTAQGERSLEESADTVVATLRRERKPLPGFGHPTHKEGDP
RAHRLLEVSRELGLAGRHVAALEAVAAAVPRHFPRPIPLNVSGAIPAVLLDAGYPVGALKGVPLLARVASLIAHLQEETR
LPIGFALADAAEHAVAYIGPEVCTA
>Mature_265_residues
MKASSPDTKPPATAIAFVDMHGVSVHGRNLSRDLIGHMGFTEYFLFLLTSRVPDSGLVAITNACLVAIAEHGLVPSVQAA
RMTLAAAPDALQGAVAAGLLGCGSVILGASQTAGLMLQEVLTAQGERSLEESADTVVATLRRERKPLPGFGHPTHKEGDP
RAHRLLEVSRELGLAGRHVAALEAVAAAVPRHFPRPIPLNVSGAIPAVLLDAGYPVGALKGVPLLARVASLIAHLQEETR
LPIGFALADAAEHAVAYIGPEVCTA

Specific function: Unknown

COG id: COG0372

COG function: function code C; Citrate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.3.1

Molecular weight: Translated: 27469; Mature: 27469

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASSPDTKPPATAIAFVDMHGVSVHGRNLSRDLIGHMGFTEYFLFLLTSRVPDSGLVAI
CCCCCCCCCCCCCEEEEEEECCCEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
TNACLVAIAEHGLVPSVQAARMTLAAAPDALQGAVAAGLLGCGSVILGASQTAGLMLQEV
HHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LTAQGERSLEESADTVVATLRRERKPLPGFGHPTHKEGDPRAHRLLEVSRELGLAGRHVA
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
ALEAVAAAVPRHFPRPIPLNVSGAIPAVLLDAGYPVGALKGVPLLARVASLIAHLQEETR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHC
LPIGFALADAAEHAVAYIGPEVCTA
CCHHHHHHHHHHHHHHHHCHHHHCC
>Mature Secondary Structure
MKASSPDTKPPATAIAFVDMHGVSVHGRNLSRDLIGHMGFTEYFLFLLTSRVPDSGLVAI
CCCCCCCCCCCCCEEEEEEECCCEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHH
TNACLVAIAEHGLVPSVQAARMTLAAAPDALQGAVAAGLLGCGSVILGASQTAGLMLQEV
HHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LTAQGERSLEESADTVVATLRRERKPLPGFGHPTHKEGDPRAHRLLEVSRELGLAGRHVA
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHH
ALEAVAAAVPRHFPRPIPLNVSGAIPAVLLDAGYPVGALKGVPLLARVASLIAHLQEETR
HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHC
LPIGFALADAAEHAVAYIGPEVCTA
CCHHHHHHHHHHHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: acetyl-CoA; H2O; oxaloacetate

Specific reaction: acetyl-CoA + H2O + oxaloacetate = citrate + CoA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA