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The map label for this gene is ycfQ [C]

Identifier: 94313191

GI number: 94313191

Start: 856645

End: 857331

Strand: Direct

Name: ycfQ [C]

Synonym: Rmet_4265

Alternate gene names: 94313191

Gene position: 856645-857331 (Clockwise)

Preceding gene: 94313188

Following gene: 94313193

Centisome position: 33.2

GC content: 60.84

Gene sequence:

>687_bases
ATGGTCCCGACTCTTCCTGTGAAAGCCACTTCGTCGCCAACGCTGAAATCGCCCGCTTCGGTAGAGAAGCCCGCCATGCG
CATTACGCGCCGGGGAGAAGCCAAGCGTGCCGCGATCCTGGAAACCGCGGCAATGCTTTTCCTGGCACGTGGCTATGATG
GCGTCAGCCTGGACGAGATCGTGAAGGCGTGTGGGGGGTCAAAGACCAACGTCTATAGTTATTTCGGCGGCAAGGACGGT
CTGTTTGTTGCCGTGGTCGAAGCGCTCTGCGATCGCTTCCTGGCGAAGGTGGAGAAGCTTGAGCCGTCGCGCACCAATAC
AGCCAATGGCTTACGGGACCTTGCAAGTCGTTTTCTGGAGTCGTTACTGGAGGAAAGCCACCTGGCGTTCCTGCGACTGA
TCATCGCGGAAGCGCGGCGCTTCCCGGAGATTGGCCAAGTCTGGTACGCACGAGGGCCGCTCGCCACCTGCCAATACGTG
GCCGGGTATCTGGCTCGACAGCAGTCGACCGGCACGAAGCTGAACGCCACGCCCGAGGTGGCCGCGCAACTCTTCCACAG
CATGGTGATTGCCGGCGTCCTGCACCGTACACTGGCCACTGGCGAGCACCCGGGTGAGGCGCAAATTGACATGTTGGTCA
AATCTGCGATTGACCTGATCGTGGCAAAGTCGTCCGCCGCAGGGTAG

Upstream 100 bases:

>100_bases
ACCGTACCGTATGGTACTGTTTTGTTTGTGGGGTGTGACATGGGTGCCGTTATGTGTCGCAAACAGCCGCCTTTGGTAGA
CTGCGCCGTCCTTCATCCAT

Downstream 100 bases:

>100_bases
GGCAACTAATCCAGGCGCTTCATACGGTAGGAAACTTCAATCCGCTCCACAGCGTCGCTGCCTTCTTCCTGAAAGCGGCG
AATATGCTCGGTCTGCGTGT

Product: TetR/AcrR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcription Regulator Protein; Bacterial Regulatory Protein; Transcriptional Regulator Protein; Transcriptional Regulator Tetr Family; TetR-Type Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; TetR-Like Virulence Regulator; Regulatory Protein Tetr; TetR Family Transcriptional Regulatory Protein; Transcriptional Regulator TetR/AcrR Family; Bacterial Regulatory Protein TetR Family Protein; TetR Family Regulatory Protein; Transcription Regulator Protein TetR Family; Transcriptional Regulator TetR; TetR Family Regulatory; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVPTLPVKATSSPTLKSPASVEKPAMRITRRGEAKRAAILETAAMLFLARGYDGVSLDEIVKACGGSKTNVYSYFGGKDG
LFVAVVEALCDRFLAKVEKLEPSRTNTANGLRDLASRFLESLLEESHLAFLRLIIAEARRFPEIGQVWYARGPLATCQYV
AGYLARQQSTGTKLNATPEVAAQLFHSMVIAGVLHRTLATGEHPGEAQIDMLVKSAIDLIVAKSSAAG

Sequences:

>Translated_228_residues
MVPTLPVKATSSPTLKSPASVEKPAMRITRRGEAKRAAILETAAMLFLARGYDGVSLDEIVKACGGSKTNVYSYFGGKDG
LFVAVVEALCDRFLAKVEKLEPSRTNTANGLRDLASRFLESLLEESHLAFLRLIIAEARRFPEIGQVWYARGPLATCQYV
AGYLARQQSTGTKLNATPEVAAQLFHSMVIAGVLHRTLATGEHPGEAQIDMLVKSAIDLIVAKSSAAG
>Mature_228_residues
MVPTLPVKATSSPTLKSPASVEKPAMRITRRGEAKRAAILETAAMLFLARGYDGVSLDEIVKACGGSKTNVYSYFGGKDG
LFVAVVEALCDRFLAKVEKLEPSRTNTANGLRDLASRFLESLLEESHLAFLRLIIAEARRFPEIGQVWYARGPLATCQYV
AGYLARQQSTGTKLNATPEVAAQLFHSMVIAGVLHRTLATGEHPGEAQIDMLVKSAIDLIVAKSSAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24507; Mature: 24507

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPTLPVKATSSPTLKSPASVEKPAMRITRRGEAKRAAILETAAMLFLARGYDGVSLDEI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
VKACGGSKTNVYSYFGGKDGLFVAVVEALCDRFLAKVEKLEPSRTNTANGLRDLASRFLE
HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SLLEESHLAFLRLIIAEARRFPEIGQVWYARGPLATCQYVAGYLARQQSTGTKLNATPEV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
AAQLFHSMVIAGVLHRTLATGEHPGEAQIDMLVKSAIDLIVAKSSAAG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVPTLPVKATSSPTLKSPASVEKPAMRITRRGEAKRAAILETAAMLFLARGYDGVSLDEI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
VKACGGSKTNVYSYFGGKDGLFVAVVEALCDRFLAKVEKLEPSRTNTANGLRDLASRFLE
HHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
SLLEESHLAFLRLIIAEARRFPEIGQVWYARGPLATCQYVAGYLARQQSTGTKLNATPEV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
AAQLFHSMVIAGVLHRTLATGEHPGEAQIDMLVKSAIDLIVAKSSAAG
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA