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The map label for this gene is tadC

Identifier: 94312590

GI number: 94312590

Start: 193060

End: 194169

Strand: Direct

Name: tadC

Synonym: Rmet_3658

Alternate gene names: NA

Gene position: 193060-194169 (Clockwise)

Preceding gene: 94312589

Following gene: 94312591

Centisome position: 7.48

GC content: 69.28

Gene sequence:

>1110_bases
ATGGACGTGTTCACACTGATCTCGATCAGCCTGCTTGTCGGCGCGGTGGCGATGATCCTGCTGGCGTGGCCGCTGATGCA
GCAATGGCGGCAGCGGCGCGCCGCCGCGCGCACGATCGACGAGGCGCTGGTGCGGCAGGCCACCCAGCGGGCCGCGGGTG
CCGCCGCGCAGGCTGGCGCCACGCAGGCCGGTGCCGCACCGGCGACGCAACCGGCCCAGCAGATGTCGCCACGCGCCGCA
GCAGTAGCCGCCGCCACGGCAGCGGCCACGGCCGCGACGCAGGGTGCGAGCCCGGCGCCGGGTGTCGCCGACACGCGGCG
CGGATCGATCGGCGCGCAGCTTGGCGGGCGCATCAGCGAACGCTTTAACCAGCACTGGCTCGAATCGCGCCTGGGCAAGG
CCGCGGTGAGTGCCGAGGAGCAGCAGTTGCTGGAGCAGTGCGGTTTCTACGGCGTCAGGCCACGCGCCGTATTCGGTGCG
TTGCGCCTGCTGGTGCCGGGCATCCTGGCGGCGCTGGCGTTCGCGTGGAAGCTCGACGTTTCGCTAGCCGGCGCCCTGGC
GTGGGCGTTTGCAGCGTTCGCAGGCGGCTTCCTGCTGGCGAAGACCCTGTTGCGGCGGCGCGCGGCTCAACGGCTGCGCA
GCGTGGCCGACGAGCTTCCGATCCTGATCGACATGCTGCGCCTGCTGCAGGGCGTGGGATTGTCGATCGACCAGAGCCTG
CAAATCATCGTGACCGAGTTCGGCAGCATGCTGCAGGTGCTTGGCCCCGAGCTGCAGCGCTCCAACCAGCAGTTCGCGTC
GGGCCGCTCGCGCGAGCAGACGCTGCTGCGCATCGGCAAGCTGTTCGACGATGAAGATCTGAAGGGCCTGATCACCTTGC
TGACGCAGGTGGACCGCCACGGCGGCGCGGTACAGGAGCCGTTGCGCCAGTTCGGCGAGCGCCTGCAGATCGCGCGCAAG
GCGCGCATGAAGGACAAGATCGGCAGGCTGACGGTCAAGATGACCGGTGTGATGGTGGTCAGCCTGCTGCCCGTGTTGCT
GATCCTGACGGCAGGCCCGGGGTTCCTGGGTGTGATGCGCATGTTGGCGCAGATGAATGGAGGCAGTTGA

Upstream 100 bases:

>100_bases
TGACCCGGGCGGCCGCGCGATGCTGCTGACGGCGGCCGGGCTAGAGGTGGCAGGCGCGTTCCTGCTCTACCGGCTTGCCC
GGTCGATCTAGAGGCCCGCC

Downstream 100 bases:

>100_bases
ATGAAGACCGTGATGTCGCCCTGGTCGCGCTGGTCGCCCCGGACCCTCTTGCCAGCGTCACTGGCCATGCCGCTGGCAGC
CGCGCTGCTACTGTCCGGAT

Product: type II secretion system protein, transmembrane

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System Protein F Subunit; Type II Secretion System; Type II Secretion System F Domain Protein; Type II Secretion System F Domain-Containing Protein; Tight Adherence TadC Related Transmembrane Protein; Type II Secretion System Protein Transmembrane; Flp Pilus Assembly Protein; Transmembrane Type II Secretion Protein; Tad Secretion System Secretion Accessory Protein

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MDVFTLISISLLVGAVAMILLAWPLMQQWRQRRAAARTIDEALVRQATQRAAGAAAQAGATQAGAAPATQPAQQMSPRAA
AVAAATAAATAATQGASPAPGVADTRRGSIGAQLGGRISERFNQHWLESRLGKAAVSAEEQQLLEQCGFYGVRPRAVFGA
LRLLVPGILAALAFAWKLDVSLAGALAWAFAAFAGGFLLAKTLLRRRAAQRLRSVADELPILIDMLRLLQGVGLSIDQSL
QIIVTEFGSMLQVLGPELQRSNQQFASGRSREQTLLRIGKLFDDEDLKGLITLLTQVDRHGGAVQEPLRQFGERLQIARK
ARMKDKIGRLTVKMTGVMVVSLLPVLLILTAGPGFLGVMRMLAQMNGGS

Sequences:

>Translated_369_residues
MDVFTLISISLLVGAVAMILLAWPLMQQWRQRRAAARTIDEALVRQATQRAAGAAAQAGATQAGAAPATQPAQQMSPRAA
AVAAATAAATAATQGASPAPGVADTRRGSIGAQLGGRISERFNQHWLESRLGKAAVSAEEQQLLEQCGFYGVRPRAVFGA
LRLLVPGILAALAFAWKLDVSLAGALAWAFAAFAGGFLLAKTLLRRRAAQRLRSVADELPILIDMLRLLQGVGLSIDQSL
QIIVTEFGSMLQVLGPELQRSNQQFASGRSREQTLLRIGKLFDDEDLKGLITLLTQVDRHGGAVQEPLRQFGERLQIARK
ARMKDKIGRLTVKMTGVMVVSLLPVLLILTAGPGFLGVMRMLAQMNGGS
>Mature_369_residues
MDVFTLISISLLVGAVAMILLAWPLMQQWRQRRAAARTIDEALVRQATQRAAGAAAQAGATQAGAAPATQPAQQMSPRAA
AVAAATAAATAATQGASPAPGVADTRRGSIGAQLGGRISERFNQHWLESRLGKAAVSAEEQQLLEQCGFYGVRPRAVFGA
LRLLVPGILAALAFAWKLDVSLAGALAWAFAAFAGGFLLAKTLLRRRAAQRLRSVADELPILIDMLRLLQGVGLSIDQSL
QIIVTEFGSMLQVLGPELQRSNQQFASGRSREQTLLRIGKLFDDEDLKGLITLLTQVDRHGGAVQEPLRQFGERLQIARK
ARMKDKIGRLTVKMTGVMVVSLLPVLLILTAGPGFLGVMRMLAQMNGGS

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39345; Mature: 39345

Theoretical pI: Translated: 11.76; Mature: 11.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCC
>Mature Secondary Structure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HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA