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The map label for this gene is tadD

Identifier: 94312591

GI number: 94312591

Start: 194170

End: 194991

Strand: Direct

Name: tadD

Synonym: Rmet_3659

Alternate gene names: NA

Gene position: 194170-194991 (Clockwise)

Preceding gene: 94312590

Following gene: 94312592

Centisome position: 7.53

GC content: 66.67

Gene sequence:

>822_bases
ATGAAGACCGTGATGTCGCCCTGGTCGCGCTGGTCGCCCCGGACCCTCTTGCCAGCGTCACTGGCCATGCCGCTGGCAGC
CGCGCTGCTACTGTCCGGATGCGCGTCCACGCCGAACACAGCGGAGGTGATGGCGCAGCAGGCCGATGCGCAGATCGAAC
TGGCGAAGCTGCGTGACAAGGAGGCCCGCGCCGAATACAACGATCAGTCCGTTTACCTGGGGCTGATCAACCGGATGCAG
ACAGAGGGCATGTACTTCGCGTCGCTGGCGCATATCGATGCCTTCCAGCAGAAGTTCGGCAGCAATCCATCGCTGCTGGC
GATGCGGGCCGATGCCCTGCGTGAGACCGGTCAGGACGATGCGGCCCTGCAGGCGTACCGTGATCTGCTCGGGACCGATC
GCGCCGCGCGGGCGCATCACGGCATTGGGCTTGTGCTCGGCAGACAGGGAGACTTTATGCGTGCCGCCGGTGAACTGCGC
CAGGCGGTGTCGATGGAGCCGGTGAACCCGCAGTACTCGAGCGATCTTGGCTACGCACTGATGCGAGGCGGTGCGCTGCA
GGATGCCCGCGTGCCGGTGATGCAGGCGCTGGAACTGGATGCCGCCAATCCGCGGTTGATCAGCAATGCGGTGGTGTGGC
TGTGGGCATCCGGCAAGCGCGCCGAAGCCAACGCCATGATGCAGCGTGCCGCGATGCAGGAGCCGACGCGAGCGGCCATC
CGCAAGGAGGCGGATCGCGTCAGTCGGGCCGCGCAGGTCCGCGACAAGACCGCGCCGCGTGGCGCGCAGGCCGTGGCGCT
CAACGCAGGAGTCAAACCATGA

Upstream 100 bases:

>100_bases
GATGGTGGTCAGCCTGCTGCCCGTGTTGCTGATCCTGACGGCAGGCCCGGGGTTCCTGGGTGTGATGCGCATGTTGGCGC
AGATGAATGGAGGCAGTTGA

Downstream 100 bases:

>100_bases
CGAGGAATCGTTCCAGACTGACAGACGCTGCGTGCGCGGTGGCAATTTCCGCGATGCTGTTGGGGGCCGCCGGGGCCGCC
GGGGCGCAAGCTGCGCAATC

Product: flp pilus assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKTVMSPWSRWSPRTLLPASLAMPLAAALLLSGCASTPNTAEVMAQQADAQIELAKLRDKEARAEYNDQSVYLGLINRMQ
TEGMYFASLAHIDAFQQKFGSNPSLLAMRADALRETGQDDAALQAYRDLLGTDRAARAHHGIGLVLGRQGDFMRAAGELR
QAVSMEPVNPQYSSDLGYALMRGGALQDARVPVMQALELDAANPRLISNAVVWLWASGKRAEANAMMQRAAMQEPTRAAI
RKEADRVSRAAQVRDKTAPRGAQAVALNAGVKP

Sequences:

>Translated_273_residues
MKTVMSPWSRWSPRTLLPASLAMPLAAALLLSGCASTPNTAEVMAQQADAQIELAKLRDKEARAEYNDQSVYLGLINRMQ
TEGMYFASLAHIDAFQQKFGSNPSLLAMRADALRETGQDDAALQAYRDLLGTDRAARAHHGIGLVLGRQGDFMRAAGELR
QAVSMEPVNPQYSSDLGYALMRGGALQDARVPVMQALELDAANPRLISNAVVWLWASGKRAEANAMMQRAAMQEPTRAAI
RKEADRVSRAAQVRDKTAPRGAQAVALNAGVKP
>Mature_273_residues
MKTVMSPWSRWSPRTLLPASLAMPLAAALLLSGCASTPNTAEVMAQQADAQIELAKLRDKEARAEYNDQSVYLGLINRMQ
TEGMYFASLAHIDAFQQKFGSNPSLLAMRADALRETGQDDAALQAYRDLLGTDRAARAHHGIGLVLGRQGDFMRAAGELR
QAVSMEPVNPQYSSDLGYALMRGGALQDARVPVMQALELDAANPRLISNAVVWLWASGKRAEANAMMQRAAMQEPTRAAI
RKEADRVSRAAQVRDKTAPRGAQAVALNAGVKP

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- InterPro:   IPR016931 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29574; Mature: 29574

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVMSPWSRWSPRTLLPASLAMPLAAALLLSGCASTPNTAEVMAQQADAQIELAKLRDK
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCH
EARAEYNDQSVYLGLINRMQTEGMYFASLAHIDAFQQKFGSNPSLLAMRADALRETGQDD
HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCH
AALQAYRDLLGTDRAARAHHGIGLVLGRQGDFMRAAGELRQAVSMEPVNPQYSSDLGYAL
HHHHHHHHHHCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
MRGGALQDARVPVMQALELDAANPRLISNAVVWLWASGKRAEANAMMQRAAMQEPTRAAI
HCCCCCCCCHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHH
RKEADRVSRAAQVRDKTAPRGAQAVALNAGVKP
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKTVMSPWSRWSPRTLLPASLAMPLAAALLLSGCASTPNTAEVMAQQADAQIELAKLRDK
CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHCH
EARAEYNDQSVYLGLINRMQTEGMYFASLAHIDAFQQKFGSNPSLLAMRADALRETGQDD
HHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCCCH
AALQAYRDLLGTDRAARAHHGIGLVLGRQGDFMRAAGELRQAVSMEPVNPQYSSDLGYAL
HHHHHHHHHHCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
MRGGALQDARVPVMQALELDAANPRLISNAVVWLWASGKRAEANAMMQRAAMQEPTRAAI
HCCCCCCCCHHHHHHHHHCCCCCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCHHHHHH
RKEADRVSRAAQVRDKTAPRGAQAVALNAGVKP
HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]