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The map label for this gene is tadB

Identifier: 94312589

GI number: 94312589

Start: 192121

End: 193050

Strand: Direct

Name: tadB

Synonym: Rmet_3657

Alternate gene names: NA

Gene position: 192121-193050 (Clockwise)

Preceding gene: 94312588

Following gene: 94312590

Centisome position: 7.45

GC content: 67.2

Gene sequence:

>930_bases
TTGATCTCTAGCGCCAGCCTTTTCATTGCCGCACTCGCCATGATCATGGTGGGGCTGGGCCTGCTGATGCTCGCTGCCGC
ACGAAGCCGGTCGCGCGCAGAGGACGCCCGCGCGCACCTGACCGCGCAGACGGAGCAGGTACGCGCGCGCTACGCAACGG
TCAGCGACCCCACGCCGCAATCGGCCACGCGCGATCTGCGCCGACGCTGGGACGACCTGATGCGGCGGGCGGACCTGAAG
CCCACGCGCCGCACGTATCTGGTCGTGGGCGTGCCGATGGTGCTGGCCGTGCTGGGTGGCGCCATCGCGGGTGGCGGCAT
CGGCGCGGGGGCCATGCTGGTCATGGTGCTGACGCTGCTGTGCTTCTTCGTTTGGCTGCGTATCCGCCGGATCAAGGAAA
AGATGCTGCGCCAGTTGCCAGGCTTTCTCGATGGCGTGGTGCGGCTGATGACCATCGGCAGCAGCGTGCCAGCCGCTTTC
CAGAACTCGGTGGCCAACACCGAACCGCCGCTGCGCCAGTGCCTGGTGCAGGTGATTCACTTGCAGCGCGCGGGCAAGGA
ACTCGATCAGGCCGTGTTGCAGATGGGCCGGGCCTACGACCTTGACGAACTCGTGATCGTGTCGTCGGTGCTGCGGCTCT
CGCAGCGCTATGGCGGCCGCGCCGACGTGGTGATGGAACGCACCGCCACCTTCATGCGCGATCGTGAAGAGGCGCAACGC
GAGCTGATGGCGCTCTCGGCGGAGACACGTATGTCGGCGTGGGTGCTGGGCCTGTTGCCGCTAATCGTGGGTGGCGGCAT
GTTCGTTTTCAATGCGGGCTACATCCTGCTGATGTGGCGTGACCCGGGCGGCCGCGCGATGCTGCTGACGGCGGCCGGGC
TAGAGGTGGCAGGCGCGTTCCTGCTCTACCGGCTTGCCCGGTCGATCTAG

Upstream 100 bases:

>100_bases
GATGGCACTGAAAGCGACCGCTGGCAGTCGCTTGGCATCCTGCCGCATTCGCCCAAGCTGGCGCGGATGCGGCCGGCCAA
CTTCTCGCTGGATGACCGCT

Downstream 100 bases:

>100_bases
AGGCCCGCCATGGACGTGTTCACACTGATCTCGATCAGCCTGCTTGTCGGCGCGGTGGCGATGATCCTGCTGGCGTGGCC
GCTGATGCAGCAATGGCGGC

Product: type II secretion system protein, pilus assembly, transmembrane part

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Pilus Assembly Protein; Type II Secretion System; Type II Secretion System Protein F Domain; Type II Secretion System F Domain Protein; Type II Secretion System F Domain-Containing Protein; Tight Adherence TadB Related Transmembrane Protein; Flp Type Pilus Assembly Protein; Flp Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Pilus Assembly Protein Tadb; Type II/IV Secretion System Membrane Protein; Type IV Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MISSASLFIAALAMIMVGLGLLMLAAARSRSRAEDARAHLTAQTEQVRARYATVSDPTPQSATRDLRRRWDDLMRRADLK
PTRRTYLVVGVPMVLAVLGGAIAGGGIGAGAMLVMVLTLLCFFVWLRIRRIKEKMLRQLPGFLDGVVRLMTIGSSVPAAF
QNSVANTEPPLRQCLVQVIHLQRAGKELDQAVLQMGRAYDLDELVIVSSVLRLSQRYGGRADVVMERTATFMRDREEAQR
ELMALSAETRMSAWVLGLLPLIVGGGMFVFNAGYILLMWRDPGGRAMLLTAAGLEVAGAFLLYRLARSI

Sequences:

>Translated_309_residues
MISSASLFIAALAMIMVGLGLLMLAAARSRSRAEDARAHLTAQTEQVRARYATVSDPTPQSATRDLRRRWDDLMRRADLK
PTRRTYLVVGVPMVLAVLGGAIAGGGIGAGAMLVMVLTLLCFFVWLRIRRIKEKMLRQLPGFLDGVVRLMTIGSSVPAAF
QNSVANTEPPLRQCLVQVIHLQRAGKELDQAVLQMGRAYDLDELVIVSSVLRLSQRYGGRADVVMERTATFMRDREEAQR
ELMALSAETRMSAWVLGLLPLIVGGGMFVFNAGYILLMWRDPGGRAMLLTAAGLEVAGAFLLYRLARSI
>Mature_309_residues
MISSASLFIAALAMIMVGLGLLMLAAARSRSRAEDARAHLTAQTEQVRARYATVSDPTPQSATRDLRRRWDDLMRRADLK
PTRRTYLVVGVPMVLAVLGGAIAGGGIGAGAMLVMVLTLLCFFVWLRIRRIKEKMLRQLPGFLDGVVRLMTIGSSVPAAF
QNSVANTEPPLRQCLVQVIHLQRAGKELDQAVLQMGRAYDLDELVIVSSVLRLSQRYGGRADVVMERTATFMRDREEAQR
ELMALSAETRMSAWVLGLLPLIVGGGMFVFNAGYILLMWRDPGGRAMLLTAAGLEVAGAFLLYRLARSI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33933; Mature: 33933

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSASLFIAALAMIMVGLGLLMLAAARSRSRAEDARAHLTAQTEQVRARYATVSDPTPQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SATRDLRRRWDDLMRRADLKPTRRTYLVVGVPMVLAVLGGAIAGGGIGAGAMLVMVLTLL
HHHHHHHHHHHHHHHHCCCCCCHHHEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
CFFVWLRIRRIKEKMLRQLPGFLDGVVRLMTIGSSVPAAFQNSVANTEPPLRQCLVQVIH
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHH
LQRAGKELDQAVLQMGRAYDLDELVIVSSVLRLSQRYGGRADVVMERTATFMRDREEAQR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ELMALSAETRMSAWVLGLLPLIVGGGMFVFNAGYILLMWRDPGGRAMLLTAAGLEVAGAF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCEEEEEEECCCCCEEEEEHHHHHHHHHH
LLYRLARSI
HHHHHHHHC
>Mature Secondary Structure
MISSASLFIAALAMIMVGLGLLMLAAARSRSRAEDARAHLTAQTEQVRARYATVSDPTPQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SATRDLRRRWDDLMRRADLKPTRRTYLVVGVPMVLAVLGGAIAGGGIGAGAMLVMVLTLL
HHHHHHHHHHHHHHHHCCCCCCHHHEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
CFFVWLRIRRIKEKMLRQLPGFLDGVVRLMTIGSSVPAAFQNSVANTEPPLRQCLVQVIH
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHH
LQRAGKELDQAVLQMGRAYDLDELVIVSSVLRLSQRYGGRADVVMERTATFMRDREEAQR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
ELMALSAETRMSAWVLGLLPLIVGGGMFVFNAGYILLMWRDPGGRAMLLTAAGLEVAGAF
HHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCEEEEEEECCCCCEEEEEHHHHHHHHHH
LLYRLARSI
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA