| Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
|---|---|
| Accession | NC_007974 |
| Length | 2,580,084 |
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The map label for this gene is cpaE2
Identifier: 94312587
GI number: 94312587
Start: 189575
End: 190813
Strand: Direct
Name: cpaE2
Synonym: Rmet_3655
Alternate gene names: NA
Gene position: 189575-190813 (Clockwise)
Preceding gene: 94312586
Following gene: 94312588
Centisome position: 7.35
GC content: 67.23
Gene sequence:
>1239_bases ATGGAGCGAAACACATCTGTGGATCATTTCCTGCTCAACACCACGCGCGAGGACGTCCGGCACTGGCTGGGCCACGCGCT GGGCGCCGTTGGCACGCTGGTCGCCGACGCCGATTCGCAGGATTCCTTCGTCGAGAAGATCGGCACATTGCGGCCCGGCC TGGTATTGCTCGATTTCACGCAGTCGCGCGCGATCGACTCGGCGCGGCTGGCCGAGCAGATCGCGCGGCTGTTTCCGCAG TTGCCGCTCGTCGCGGTGGGCCACGCAGGCGAGCCCGAGGCGTTGCTCGCCGCCTTGCGTGCCGGCGTGCGCGACTTCAT TGACCTGGGCGGCGCACCCGACCATGCGGCGTCCGTGGCCCGCCAGTTGATGGTGCCGCGCGTGCAGGTGCGGCCGGTCG CGGCAACGCGGCGCGACGGCAAGATCGTCGCGCTGCTTGGCGCGCGTCCGGGCGTGGGCGTCACCAGCCTGGCCGTGAAT CTTGCGGCGGCCGTACGTCGCGGCGCGCAGGCCGAGGTGTTGCTGCTCGATCTGGGATTGCCCGCGCGGGACGGTGCCCT CTACTCCAACGTCTCACCCGAGTTCCATTTTGTCGAAGCGGTGCGCAACCTGCGGCGCTTTGACCAGGTGTTCGTCGATA CCGCCATCGTGCGGCACACCAATGGCATGTCGGTGCTGCCGCTGCCGGCCAGTCTGGCCGAGATGCGCGACATCTCGTTT TCCGAGGCCATGGCGCTGCTGGACCGGCTGCGCGAGTTCTTCGATCTCCAGGTGGTGGACCTTGGCGGGTTCTCGAACGC CGAGTTCATGGCGCAGATCGTCAAGGCTGCCGATACCGTGGTGCTGGTGGCCGAGCAGAGCGTCGGTGCGATCGTCTCCG CGGCAGAACTGCTGCAGGAGCTGAAGAAGCGCGAGGTCGAGCGCGATGACCTGCATCTGCTGGTATCGCGCTTCGACGCC GAACTCGGGGTCGATGCGGAACAGATCGCCGATCGGATCGGCGTGGCCTCGGTGGGCGTGCTGCCTGAACGACGGGCCGC ACTTCTGCAGGCAGGAAATCGTGGCGTCGTGCTGGCTGACCAATCACCGGCGGACCCCTATGTGCGCGCTATCGGCGCGC TGTTGGAACGACTGGGATTCCGCGAAGGGCAAGTGCCCGAGCGCAGTGTCCTGGCCCGGATCAAGGAAAAGTTGCCCCAG GTGCTGCGCCCGGTGCGCGCCGCAAGGGTAGGAAACTGA
Upstream 100 bases:
>100_bases ACGGCCGCACCAGCGCCAATCCCAACGTCTGGGGCCGCTACATGCTGGGCGAGTACGCGGACCAGAGCCTGCCAGGGTTC TCGAGATAGGCGGACCAACG
Downstream 100 bases:
>100_bases CATGACCGACGCGATCGAATTCTCGGACAACGCTGCTGCCCCGTTTCCTGTTTCGCAGGAGTTCCACAATATCAAGGAGG CCGCGCACGAACACCTGCTG
Product: pilus assembly protein
Products: NA
Alternate protein names: Pilus Assembly Protein CpaE; Flp Pilus Assembly Protein ATPase CpaE-Like Protein; Response Regulator Receiver Domain-Containing Protein; Pilus Assembly Protein; Flp Pilus Assembly Protein ATPase CpaE-Like; Flp Pilus Assembly ATPase; Flp Pilus Assembly Protein ATPase CpaE; Flp Pilus Assembly Protein ATPase; Response Receiver Involved In Pilum Assembly; Response Regulator; Septum Site-Determining Protein; Flp Pilus Assembly Protein; Response Regulator Receiver; Flp Pilus Assembly Protein CpaE; Flp Pilus Assembly ATPase CpaE; Response Regulator Receiver Domain Protein; Two-Component Response Regulator; Fimbriae Assembly Protein; Chromosome Partitioning ATPase; Type II Secretion System Protein; AAA ATPase; Flp Pilus Assembly Response Receiver ATPase CpaE; Cobyrinic Acid Ac-Diamide Synthase; Pilus Assembly Protein CpaE-Like Protein; Pilus Assembly Protein CpaE-Like
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MERNTSVDHFLLNTTREDVRHWLGHALGAVGTLVADADSQDSFVEKIGTLRPGLVLLDFTQSRAIDSARLAEQIARLFPQ LPLVAVGHAGEPEALLAALRAGVRDFIDLGGAPDHAASVARQLMVPRVQVRPVAATRRDGKIVALLGARPGVGVTSLAVN LAAAVRRGAQAEVLLLDLGLPARDGALYSNVSPEFHFVEAVRNLRRFDQVFVDTAIVRHTNGMSVLPLPASLAEMRDISF SEAMALLDRLREFFDLQVVDLGGFSNAEFMAQIVKAADTVVLVAEQSVGAIVSAAELLQELKKREVERDDLHLLVSRFDA ELGVDAEQIADRIGVASVGVLPERRAALLQAGNRGVVLADQSPADPYVRAIGALLERLGFREGQVPERSVLARIKEKLPQ VLRPVRAARVGN
Sequences:
>Translated_412_residues MERNTSVDHFLLNTTREDVRHWLGHALGAVGTLVADADSQDSFVEKIGTLRPGLVLLDFTQSRAIDSARLAEQIARLFPQ LPLVAVGHAGEPEALLAALRAGVRDFIDLGGAPDHAASVARQLMVPRVQVRPVAATRRDGKIVALLGARPGVGVTSLAVN LAAAVRRGAQAEVLLLDLGLPARDGALYSNVSPEFHFVEAVRNLRRFDQVFVDTAIVRHTNGMSVLPLPASLAEMRDISF SEAMALLDRLREFFDLQVVDLGGFSNAEFMAQIVKAADTVVLVAEQSVGAIVSAAELLQELKKREVERDDLHLLVSRFDA ELGVDAEQIADRIGVASVGVLPERRAALLQAGNRGVVLADQSPADPYVRAIGALLERLGFREGQVPERSVLARIKEKLPQ VLRPVRAARVGN >Mature_412_residues MERNTSVDHFLLNTTREDVRHWLGHALGAVGTLVADADSQDSFVEKIGTLRPGLVLLDFTQSRAIDSARLAEQIARLFPQ LPLVAVGHAGEPEALLAALRAGVRDFIDLGGAPDHAASVARQLMVPRVQVRPVAATRRDGKIVALLGARPGVGVTSLAVN LAAAVRRGAQAEVLLLDLGLPARDGALYSNVSPEFHFVEAVRNLRRFDQVFVDTAIVRHTNGMSVLPLPASLAEMRDISF SEAMALLDRLREFFDLQVVDLGGFSNAEFMAQIVKAADTVVLVAEQSVGAIVSAAELLQELKKREVERDDLHLLVSRFDA ELGVDAEQIADRIGVASVGVLPERRAALLQAGNRGVVLADQSPADPYVRAIGALLERLGFREGQVPERSVLARIKEKLPQ VLRPVRAARVGN
Specific function: Unknown
COG id: COG4963
COG function: function code U; Flp pilus assembly protein, ATPase CpaE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44444; Mature: 44444
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00104 EPSP_SYNTHASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERNTSVDHFLLNTTREDVRHWLGHALGAVGTLVADADSQDSFVEKIGTLRPGLVLLDFT CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECC QSRAIDSARLAEQIARLFPQLPLVAVGHAGEPEALLAALRAGVRDFIDLGGAPDHAASVA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RQLMVPRVQVRPVAATRRDGKIVALLGARPGVGVTSLAVNLAAAVRRGAQAEVLLLDLGL HHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC PARDGALYSNVSPEFHFVEAVRNLRRFDQVFVDTAIVRHTNGMSVLPLPASLAEMRDISF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCH SEAMALLDRLREFFDLQVVDLGGFSNAEFMAQIVKAADTVVLVAEQSVGAIVSAAELLQE HHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH LKKREVERDDLHLLVSRFDAELGVDAEQIADRIGVASVGVLPERRAALLQAGNRGVVLAD HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCCHHHHHHHHCCCCCEEEEC QSPADPYVRAIGALLERLGFREGQVPERSVLARIKEKLPQVLRPVRAARVGN CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERNTSVDHFLLNTTREDVRHWLGHALGAVGTLVADADSQDSFVEKIGTLRPGLVLLDFT CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECC QSRAIDSARLAEQIARLFPQLPLVAVGHAGEPEALLAALRAGVRDFIDLGGAPDHAASVA HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH RQLMVPRVQVRPVAATRRDGKIVALLGARPGVGVTSLAVNLAAAVRRGAQAEVLLLDLGL HHHHCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC PARDGALYSNVSPEFHFVEAVRNLRRFDQVFVDTAIVRHTNGMSVLPLPASLAEMRDISF CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHCCCH SEAMALLDRLREFFDLQVVDLGGFSNAEFMAQIVKAADTVVLVAEQSVGAIVSAAELLQE HHHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHH LKKREVERDDLHLLVSRFDAELGVDAEQIADRIGVASVGVLPERRAALLQAGNRGVVLAD HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHCCCCCHHHHHHHHCCCCCEEEEC QSPADPYVRAIGALLERLGFREGQVPERSVLARIKEKLPQVLRPVRAARVGN CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA