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The map label for this gene is tadA [C]

Identifier: 94312588

GI number: 94312588

Start: 190815

End: 192131

Strand: Direct

Name: tadA [C]

Synonym: Rmet_3656

Alternate gene names: 94312588

Gene position: 190815-192131 (Clockwise)

Preceding gene: 94312587

Following gene: 94312589

Centisome position: 7.4

GC content: 64.69

Gene sequence:

>1317_bases
ATGACCGACGCGATCGAATTCTCGGACAACGCTGCTGCCCCGTTTCCTGTTTCGCAGGAGTTCCACAATATCAAGGAGGC
CGCGCACGAACACCTGCTGACGCGCATCGAGGAGCTTGGCGCCGAGTTCGGGCGCTGGTCGCGCGCGGCCATCCAGCGTT
TTGTCGATCTGGAACTGGAGAGTTTCACGCGCCTGCGCCGCATTCCGATCAACGAGGCCGAGCTGCGCCAGATTTCCGAG
GCGCTGACCAACGAGCTGGCGGGCTTTGGGCCGATCGAGGATCTGCTCAACGATCCGGCGGTGGAAGATATTCTCGTCAA
CGGCCACATGGACGTCTACGTGTCACGCCACGGCGTGCTGGAGCGGATTCCGGTGCGGTTTGCCGATGGCGGGCACTTGC
TGCGCATCGTGCGGCGGATCCTGGCGCCGATTGGCCGCCGCCTGGACGAATCGAATCCGATGGTCGATGCGCGCCTGCCA
GACGGCGGCCGTATCAACGTGATCATCCCGCCGCTGGCGCTGGAAGGTCCGGTCGTCTCGATCCGGAAATTCCGCAAGGA
TCCGCTGACGCCGCTCGATCTGCAGACACTCGGCACGATGAGCCCGGAGATTACCGAGCTGCTTGACGCCGCCGTGCGCG
CGCGCTGCAACATCCTTGTGAGCGGTGGCACCAGTTCAGGCAAGACGTCGCTGCTCAACGCACTGGCCACCTTCATCCCG
TCCACCGAGCGTGTGATTACGATCGAGGACACGGCCGAACTGGCGCTCAATCACCCGCACGTGGTCCGGCTGGAGAGCCG
TCCCGGCGGCTTCGAAGGTACCGGCACGGTGACGATCCGCGACCTGCTGCGCAACAGCCTGCGGATGCGTCCGGACCGCA
TCATCGTGGGCGAAGTGCGCGGCGGCGAAGTGCTGGAAATGCTGCAGGCGATGAGCACGGGCCACGACGGCTCGATGGGC
ACGATCCACGCCAGCAGCCCGCGCGAATGCCTGTACCGGCTGGAGATGCTGGCCGGGTTCGCGGGCTTCCAGGGCAGCGA
AGTCAGCCTGCGCCGCCAGATCGCCAATGCGATCGACTTCATCGTGCAGATCGGCCGGCTGTCGAATGGCCGGCGTCGCA
TCCTGTCGATCACGGAAGTGACCGGACTGGGCGACAACATCATTTCCACGCAGGAGCTTTACCGGCACGAACCGGTGCAG
AACCCGGATGGCACTGAAAGCGACCGCTGGCAGTCGCTTGGCATCCTGCCGCATTCGCCCAAGCTGGCGCGGATGCGGCC
GGCCAACTTCTCGCTGGATGACCGCTTTGATCTCTAG

Upstream 100 bases:

>100_bases
CGCGAAGGGCAAGTGCCCGAGCGCAGTGTCCTGGCCCGGATCAAGGAAAAGTTGCCCCAGGTGCTGCGCCCGGTGCGCGC
CGCAAGGGTAGGAAACTGAC

Downstream 100 bases:

>100_bases
CGCCAGCCTTTTCATTGCCGCACTCGCCATGATCATGGTGGGGCTGGGCCTGCTGATGCTCGCTGCCGCACGAAGCCGGT
CGCGCGCAGAGGACGCCCGC

Product: type II/IV secretion system protein, ATPase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MTDAIEFSDNAAAPFPVSQEFHNIKEAAHEHLLTRIEELGAEFGRWSRAAIQRFVDLELESFTRLRRIPINEAELRQISE
ALTNELAGFGPIEDLLNDPAVEDILVNGHMDVYVSRHGVLERIPVRFADGGHLLRIVRRILAPIGRRLDESNPMVDARLP
DGGRINVIIPPLALEGPVVSIRKFRKDPLTPLDLQTLGTMSPEITELLDAAVRARCNILVSGGTSSGKTSLLNALATFIP
STERVITIEDTAELALNHPHVVRLESRPGGFEGTGTVTIRDLLRNSLRMRPDRIIVGEVRGGEVLEMLQAMSTGHDGSMG
TIHASSPRECLYRLEMLAGFAGFQGSEVSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLGDNIISTQELYRHEPVQ
NPDGTESDRWQSLGILPHSPKLARMRPANFSLDDRFDL

Sequences:

>Translated_438_residues
MTDAIEFSDNAAAPFPVSQEFHNIKEAAHEHLLTRIEELGAEFGRWSRAAIQRFVDLELESFTRLRRIPINEAELRQISE
ALTNELAGFGPIEDLLNDPAVEDILVNGHMDVYVSRHGVLERIPVRFADGGHLLRIVRRILAPIGRRLDESNPMVDARLP
DGGRINVIIPPLALEGPVVSIRKFRKDPLTPLDLQTLGTMSPEITELLDAAVRARCNILVSGGTSSGKTSLLNALATFIP
STERVITIEDTAELALNHPHVVRLESRPGGFEGTGTVTIRDLLRNSLRMRPDRIIVGEVRGGEVLEMLQAMSTGHDGSMG
TIHASSPRECLYRLEMLAGFAGFQGSEVSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLGDNIISTQELYRHEPVQ
NPDGTESDRWQSLGILPHSPKLARMRPANFSLDDRFDL
>Mature_437_residues
TDAIEFSDNAAAPFPVSQEFHNIKEAAHEHLLTRIEELGAEFGRWSRAAIQRFVDLELESFTRLRRIPINEAELRQISEA
LTNELAGFGPIEDLLNDPAVEDILVNGHMDVYVSRHGVLERIPVRFADGGHLLRIVRRILAPIGRRLDESNPMVDARLPD
GGRINVIIPPLALEGPVVSIRKFRKDPLTPLDLQTLGTMSPEITELLDAAVRARCNILVSGGTSSGKTSLLNALATFIPS
TERVITIEDTAELALNHPHVVRLESRPGGFEGTGTVTIRDLLRNSLRMRPDRIIVGEVRGGEVLEMLQAMSTGHDGSMGT
IHASSPRECLYRLEMLAGFAGFQGSEVSLRRQIANAIDFIVQIGRLSNGRRRILSITEVTGLGDNIISTQELYRHEPVQN
PDGTESDRWQSLGILPHSPKLARMRPANFSLDDRFDL

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=236, Percent_Identity=28.3898305084746, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 48517; Mature: 48386

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAIEFSDNAAAPFPVSQEFHNIKEAAHEHLLTRIEELGAEFGRWSRAAIQRFVDLELE
CCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
SFTRLRRIPINEAELRQISEALTNELAGFGPIEDLLNDPAVEDILVNGHMDVYVSRHGVL
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHEEECCCEEEEEECCCHH
ERIPVRFADGGHLLRIVRRILAPIGRRLDESNPMVDARLPDGGRINVIIPPLALEGPVVS
HHCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHH
IRKFRKDPLTPLDLQTLGTMSPEITELLDAAVRARCNILVSGGTSSGKTSLLNALATFIP
HHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCC
STERVITIEDTAELALNHPHVVRLESRPGGFEGTGTVTIRDLLRNSLRMRPDRIIVGEVR
CCCEEEEEECHHHHHCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECC
GGEVLEMLQAMSTGHDGSMGTIHASSPRECLYRLEMLAGFAGFQGSEVSLRRQIANAIDF
CCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IVQIGRLSNGRRRILSITEVTGLGDNIISTQELYRHEPVQNPDGTESDRWQSLGILPHSP
HHHHHHCCCCCHHEEEEEHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCC
KLARMRPANFSLDDRFDL
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDAIEFSDNAAAPFPVSQEFHNIKEAAHEHLLTRIEELGAEFGRWSRAAIQRFVDLELE
CCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
SFTRLRRIPINEAELRQISEALTNELAGFGPIEDLLNDPAVEDILVNGHMDVYVSRHGVL
HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHEEECCCEEEEEECCCHH
ERIPVRFADGGHLLRIVRRILAPIGRRLDESNPMVDARLPDGGRINVIIPPLALEGPVVS
HHCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHH
IRKFRKDPLTPLDLQTLGTMSPEITELLDAAVRARCNILVSGGTSSGKTSLLNALATFIP
HHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHCC
STERVITIEDTAELALNHPHVVRLESRPGGFEGTGTVTIRDLLRNSLRMRPDRIIVGEVR
CCCEEEEEECHHHHHCCCCEEEEECCCCCCCCCCCCEEHHHHHHHHHHCCCCEEEEEECC
GGEVLEMLQAMSTGHDGSMGTIHASSPRECLYRLEMLAGFAGFQGSEVSLRRQIANAIDF
CCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
IVQIGRLSNGRRRILSITEVTGLGDNIISTQELYRHEPVQNPDGTESDRWQSLGILPHSP
HHHHHHCCCCCHHEEEEEHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCC
KLARMRPANFSLDDRFDL
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]