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The map label for this gene is 94312261

Identifier: 94312261

GI number: 94312261

Start: 3595636

End: 3595965

Strand: Reverse

Name: 94312261

Synonym: Rmet_3330

Alternate gene names: NA

Gene position: 3595965-3595636 (Counterclockwise)

Preceding gene: 94312262

Following gene: 94312259

Centisome position: 91.54

GC content: 58.18

Gene sequence:

>330_bases
ATGACCGATTTTCGTTTGAACCGTAGCGCCGTCACGCTTGCATTGGTGCTGTTCTCGGTAGGAGTGCACGCCGAGACACC
GAAGCTTGACGAGAAGGTGAAGGCAATCCTGCCGCTGTGTGCCTCTTGCCATGGCATCGATGGCATCAGCAGCGTTGGGC
TGTACCCGAACCTATCGGGGCAGAAGCCGGAATACCTGGCCAAGCAGTTGCACGATTTCAAGGCTGGGCGCCGCAACGAT
CCTGTGATGCGGCCAATGGCCGAACCGCTGGACGATGCTGCGATCGATGCATTGTCGCGCTACTTCAGCAAGGTGAAGCC
ACCGAAGTGA

Upstream 100 bases:

>100_bases
CAAGATGGAAAGCCCGGCAGGCATCTTCTCGCGTGCCCGGACGCAATGGATCACCGTGGGCCTGCCGCCCACTCGCAAGA
ACTGATGGAGGAGTGACGCG

Downstream 100 bases:

>100_bases
TGGAGCGTGCGGTGGCGGGCTCCGCCACCGCACGCCTGAAGCGGGCAGTCAGCACGGATTTGAGCAGGCTCATGGCTTCG
CCGATTTGCTTGGTCGTCAA

Product: cytochrome c, class I precursor (c553-like)

Products: NA

Alternate protein names: Cytochrome C; Class I Cytochrome C; Soluble Cytochrome CB; Cytochrome; Cytochrome C Family Protein; Cytochrome C Class ICCytochrome C Class I; Cytochrome C-

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTDFRLNRSAVTLALVLFSVGVHAETPKLDEKVKAILPLCASCHGIDGISSVGLYPNLSGQKPEYLAKQLHDFKAGRRND
PVMRPMAEPLDDAAIDALSRYFSKVKPPK

Sequences:

>Translated_109_residues
MTDFRLNRSAVTLALVLFSVGVHAETPKLDEKVKAILPLCASCHGIDGISSVGLYPNLSGQKPEYLAKQLHDFKAGRRND
PVMRPMAEPLDDAAIDALSRYFSKVKPPK
>Mature_108_residues
TDFRLNRSAVTLALVLFSVGVHAETPKLDEKVKAILPLCASCHGIDGISSVGLYPNLSGQKPEYLAKQLHDFKAGRRNDP
VMRPMAEPLDDAAIDALSRYFSKVKPPK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11949; Mature: 11818

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFRLNRSAVTLALVLFSVGVHAETPKLDEKVKAILPLCASCHGIDGISSVGLYPNLSG
CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
QKPEYLAKQLHDFKAGRRNDPVMRPMAEPLDDAAIDALSRYFSKVKPPK
CCHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TDFRLNRSAVTLALVLFSVGVHAETPKLDEKVKAILPLCASCHGIDGISSVGLYPNLSG
CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
QKPEYLAKQLHDFKAGRRNDPVMRPMAEPLDDAAIDALSRYFSKVKPPK
CCHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA