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The map label for this gene is yddH [H]

Identifier: 94311910

GI number: 94311910

Start: 3237080

End: 3237697

Strand: Direct

Name: yddH [H]

Synonym: Rmet_2978

Alternate gene names: 94311910

Gene position: 3237080-3237697 (Clockwise)

Preceding gene: 94311908

Following gene: 94311913

Centisome position: 82.41

GC content: 64.08

Gene sequence:

>618_bases
ATGGCTTCCCACCGACTCGACGTTGATCTCGCCAAAGCCTATCGCCTGCTGAATCACGGTCCGACCGTTCTGGTCAGTGC
CGCGCACAATGGACAACGCAATATCATGGCGGCGGCATGGGCCATGCCGCTCGATTTCGCGCCGCCGAAGGTGGCCGTGG
TGCTGGACAAGTCCACCTGGACGCGCCAGTTGCTTGAAGCAAGCGGCGAATTCGCGTTGCAGGTTCCCACCGCCGCCCAG
GTCGATATCACGCAGGCACTGGGCTCCAGTTCGGGACGGGCCCTGACGGAAAAGCAAGGCATCGACAAGTTCGCCGCGTA
CGGCTTGCAGACCTTCGCTGGCAGCGTGATCGGCGCTCCGCTGCTCGAAGGCTGCGCGGCGTGGCTGGAATGCAGGCTAT
TGCCCGAACCCGCGATCCAGAACAGCTACGATCTGTTTCTCGGCGAAGTGGTCGCAGCCCACGCCGACGGCCGCGTCTTC
AGCAATGGCCGCTGGCACTTTACCGGCCAAGACGACCTGCGCACGATCCACCATGTCGCGGGTGGCCACTTCCTCGTCGA
TGGCGATGCTATCGATGCGCGGCCGCTAACGCCACCAGTCACCCCACCTGCCGCCTGA

Upstream 100 bases:

>100_bases
GTCAAAAATCGCCGTTCATTGAATTCCATGACCCGCTATAGTGCCTGAAGGCGTCCCAATTCTGCCTCGCAGCCCGCCCC
GTCTTGTTTCAGATCAAACC

Downstream 100 bases:

>100_bases
GCAACAAAAAACGCGCCCGAGGGCGCGTTTTTTGTTCAGCGAGGATGGCTTACTTGGCCACGACGCGTGCCATTTCCAGG
CACTTGTTCGAATAGCCCCA

Product: Flavin reductase-like, FMN-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MASHRLDVDLAKAYRLLNHGPTVLVSAAHNGQRNIMAAAWAMPLDFAPPKVAVVLDKSTWTRQLLEASGEFALQVPTAAQ
VDITQALGSSSGRALTEKQGIDKFAAYGLQTFAGSVIGAPLLEGCAAWLECRLLPEPAIQNSYDLFLGEVVAAHADGRVF
SNGRWHFTGQDDLRTIHHVAGGHFLVDGDAIDARPLTPPVTPPAA

Sequences:

>Translated_205_residues
MASHRLDVDLAKAYRLLNHGPTVLVSAAHNGQRNIMAAAWAMPLDFAPPKVAVVLDKSTWTRQLLEASGEFALQVPTAAQ
VDITQALGSSSGRALTEKQGIDKFAAYGLQTFAGSVIGAPLLEGCAAWLECRLLPEPAIQNSYDLFLGEVVAAHADGRVF
SNGRWHFTGQDDLRTIHHVAGGHFLVDGDAIDARPLTPPVTPPAA
>Mature_204_residues
ASHRLDVDLAKAYRLLNHGPTVLVSAAHNGQRNIMAAAWAMPLDFAPPKVAVVLDKSTWTRQLLEASGEFALQVPTAAQV
DITQALGSSSGRALTEKQGIDKFAAYGLQTFAGSVIGAPLLEGCAAWLECRLLPEPAIQNSYDLFLGEVVAAHADGRVFS
NGRWHFTGQDDLRTIHHVAGGHFLVDGDAIDARPLTPPVTPPAA

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=194, Percent_Identity=48.9690721649485, Blast_Score=188, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21825; Mature: 21694

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASHRLDVDLAKAYRLLNHGPTVLVSAAHNGQRNIMAAAWAMPLDFAPPKVAVVLDKSTW
CCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCCEEEEEEECCHH
TRQLLEASGEFALQVPTAAQVDITQALGSSSGRALTEKQGIDKFAAYGLQTFAGSVIGAP
HHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHH
LLEGCAAWLECRLLPEPAIQNSYDLFLGEVVAAHADGRVFSNGRWHFTGQDDLRTIHHVA
HHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEECCCHHHHHHHHHC
GGHFLVDGDAIDARPLTPPVTPPAA
CCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASHRLDVDLAKAYRLLNHGPTVLVSAAHNGQRNIMAAAWAMPLDFAPPKVAVVLDKSTW
CCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHCCCCCCCCEEEEEEECCHH
TRQLLEASGEFALQVPTAAQVDITQALGSSSGRALTEKQGIDKFAAYGLQTFAGSVIGAP
HHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHH
LLEGCAAWLECRLLPEPAIQNSYDLFLGEVVAAHADGRVFSNGRWHFTGQDDLRTIHHVA
HHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEECCCHHHHHHHHHC
GGHFLVDGDAIDARPLTPPVTPPAA
CCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]