| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is fur
Identifier: 94311908
GI number: 94311908
Start: 3235281
End: 3235712
Strand: Direct
Name: fur
Synonym: Rmet_2976
Alternate gene names: 94311908
Gene position: 3235281-3235712 (Clockwise)
Preceding gene: 94311898
Following gene: 94311910
Centisome position: 82.36
GC content: 57.64
Gene sequence:
>432_bases ATGCCGAGTCCGGCGGACCTCAAAAATATCGGCCTCAAGGCGACCGTCCCCCGCCTGAAGATCCTTGAGATCTTCCAGAC CAGCGAACAGCGCCATCTAAGCGCGGAAGATGTCTATCGCATCCTGCTCAACGAGCATATGGATATCGGCCTCGCCACGG TCTATCGCGTTCTCACGCAGTTCGAACAGGCTGGCCTGCTCTCGCGGAACAACTTCGAGTCGGGCAAGGCGATTTTCGAA CTGAACGAAGGCAAGCACCACGATCACCTGGTGTGCCTGGATTGCGGGCGCGTCGAGGAATTTTTCGATGCTGATATCGA ACAGCGGCAACAGAGCATCGCCCGCGAGCGCGGCTTTGCACTACAGGAACATGCCCTGTCGCTCTATGGCAACTGCACCA AGGACGATTGCCCCCACAGACCGAGACGATAA
Upstream 100 bases:
>100_bases CGGAGAGCGGCGTGTACGCGTCATGGCACCGGGGCGACATTTGCCGCCAAAACCCTTATGATTCAACTATCCAGACATTG TACTCTAGGGAGTCACGCCC
Downstream 100 bases:
>100_bases CCCCGCTGCGGTACCCGCCCAGCAGCAGGCAATAAAAAACCGGCGCCAAGGCGCCGGTTTTTTATTGGGTCGACACAGCG TTATTCCTGCGTCAGATCCT
Product: DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport
Products: NA
Alternate protein names: Ferric uptake regulator
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MPSPADLKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIFE LNEGKHHDHLVCLDCGRVEEFFDADIEQRQQSIARERGFALQEHALSLYGNCTKDDCPHRPRR
Sequences:
>Translated_143_residues MPSPADLKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIFE LNEGKHHDHLVCLDCGRVEEFFDADIEQRQQSIARERGFALQEHALSLYGNCTKDDCPHRPRR >Mature_142_residues PSPADLKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQFEQAGLLSRNNFESGKAIFEL NEGKHHDHLVCLDCGRVEEFFDADIEQRQQSIARERGFALQEHALSLYGNCTKDDCPHRPRR
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulator for biosynthesis of the siderophore alcaligin E
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family
Homologues:
Organism=Escherichia coli, GI1786899, Length=131, Percent_Identity=56.4885496183206, Blast_Score=160, Evalue=3e-41,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): FUR_RALME (O30330)
Other databases:
- EMBL: AJ001224 - EMBL: CP000352 - RefSeq: YP_585118.1 - ProteinModelPortal: O30330 - SMR: O30330 - STRING: O30330 - GeneID: 4039804 - GenomeReviews: CP000352_GR - KEGG: rme:Rmet_2976 - eggNOG: COG0735 - HOGENOM: HBG731501 - OMA: GEVIEFF - PhylomeDB: O30330 - ProtClustDB: CLSK897440 - BioCyc: RMET266264:RMET_2976-MONOMER - GO: GO:0005737 - InterPro: IPR002481 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: PF01475 FUR
EC number: NA
Molecular weight: Translated: 16432; Mature: 16301
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPADLKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQ CCCCCCHHHCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FEQAGLLSRNNFESGKAIFELNEGKHHDHLVCLDCGRVEEFFDADIEQRQQSIARERGFA HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHCCH LQEHALSLYGNCTKDDCPHRPRR HHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PSPADLKNIGLKATVPRLKILEIFQTSEQRHLSAEDVYRILLNEHMDIGLATVYRVLTQ CCCCCHHHCCCCCCCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH FEQAGLLSRNNFESGKAIFELNEGKHHDHLVCLDCGRVEEFFDADIEQRQQSIARERGFA HHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHCCH LQEHALSLYGNCTKDDCPHRPRR HHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA