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The map label for this gene is pauA [C]

Identifier: 94311534

GI number: 94311534

Start: 2824730

End: 2826856

Strand: Reverse

Name: pauA [C]

Synonym: Rmet_2598

Alternate gene names: 94311534

Gene position: 2826856-2824730 (Counterclockwise)

Preceding gene: 94311535

Following gene: 94311533

Centisome position: 71.97

GC content: 65.96

Gene sequence:

>2127_bases
ATGGAGACATACCAAGACCTGTCGCGGCTCGTCAGCCCGCGTTCCATCGCCCTGGTTGGGGCCAGCGACCGCAGCGGCAG
CATTGGCGCGCGCGCACTCGAGAATCTGATGGACCATTCCGACTTCAAAGGCGACGTCTATCTGGTCAACGCGACCAAGC
CGGAAGTGGCAGGGCGCAAGGCATGGCCCGATGTGGCCTCGCTGCCGTCAGTGCCCGACACCGCTCTGGTAGCGGTGCCC
GCCGAGCACGTGCTCGCGGTGCTTGAACAATGCGGCGAGAAAGGGGTGCGCTTCGCGATTATTCTGACCTCGGGCTTCGG
CGAAGCCGGCGAGGAAGGCAAGGCCGCCGAGCAGACCATGAAGGAGATCGTGGCGCGCACGGGCATGCGCATCTACGGAC
CGAATTGCCCGGGCCTGACCAATATCACGGAGCGTCTCGGCTTCACGTTCTCGCCATCGTTCCGGCACGATCTTCGCGGC
GGGCCGGTCGGGCTGGCCACGCAGGGTGGCGGCCTGGGCCGCAATGTGCTGCAGGCGATGGACCGTGGCATCGGCGTGGC
GCTCTGGAGTTCCAGCGGCAACGAGGTCGATTTGCAGGTGAGCGACTTCATCCACTACATGGCCGACGCGCCGGATATCA
AGGTCATCGCCACGCTGCTCGAAGGCGTCAACGATGGCCGCAAGTTCGTCGCCGCCGTGCAGCACGCGGCGCGCAAGGGC
AAGCCGGTGGTGGTGCTGAAGGTGGGACGCTCCGAGTACGGCCGCAAGGCGGCGCAGTCGCACACGGCGTCGATCACCGG
CTCGGCGGAGGTCAACAGCGCCGTGTTCGCGCAGCTTGGCGTGGTGGAGGTGGATGACATCGACGAATTGATCGACACCG
CCTGGCTGTTCGCGCGCGGCATGCCGCGTCAGGGCGGCGCGCTGGCCATCTATTCGGGATCGGGCGGCACGGCGGCACTG
TGCGCCGACATGGTCGGCAATGCCGGATTGAAACTGGCGGAGTTCGCGCCGGAGACGCTTGCCGTGCTGCGCGACGCGCT
GCCGTCGTATGCCGCAATCGACAACCCCATCGACACCACCACCGCGGTGATGGCAAAGCCGGAGCTGGCGCGCACGTGCC
TGCAGGCGGTCTGCAATGACCCGAGCGTGTCGCTGGTACTTTTGCCGCAGGCGCTCGAGTATGGCGACATCACCAAGCTC
GCTGCCGATATCACGGCCGACGTGCAGAAAGAGAGTCCGGTGCCGATGTTGCCGATCTGGATGAGCGAGCGTCAGGGCGG
GGCCTACAAGGTGTTTGCCGATGCAGGCCTGGCGCCCGTGCGCAGCATCAGCAAGGCGGTCAAGGCCGTGGAGCGCTGGA
TGGGTTACGCGGACTGGCGCGCCCGCGCCGATATCGACTTCAAGCCGCTGATGCAGACTGCAGCGCGGCCCGTCGCCGAT
GTGCCGACGCGGGCCCTGTCAGAGCCCGAGGGCAAGGCGATGCTGCGTGCGGCCGGCATCGCTATTCCGGTGTCCCGCGT
GGCGGCCACGCTGGCGCAGGCGCGTTTGCTGGCGCGCGAGGTGGGGTATCCGCTGGTGGCCAAGGTGGTGAGCGAGCAGA
TTCAGCACAAGTCGGATGTCGGCGGTGTGGTGGTCGGCATTCACGATGATGCGGGACTCGAAGCGGCATGGGAGAGCATT
CACACGTCGGTCAAGCGCAATATGCCCGATGCGCGTATCGACGGGATTCTGTTGGAACACATGGCCGCGCCGGGTGGACT
GGAGATCCTGATTGGCGTGTCGCGCGATCCGGTGTTCGGCCACATCCTGACCTTCGGTCTCGGCGGGATCTACGTGGAAG
TCTTCAAGGACGTATCGCGCCGGATGCTACCGCTGTCGGCCACGGAGGCCGAGGCCATGATTCGCGAGGTGCGCTGCTTC
CCGCTGCTCGATGGCGCGCGAGGCAAGCCACGGCGCGACATCGCCGCGCTGACTGCGCTGCTGGTGAAAGTGTCGGACTT
TGTCGTCGCGCATGGTGACCATCTGGTCGAGATGGATCTGAATCCGGTATGGGTCGGCGTTGCGGGAGAGGGCGCATTGC
CGCTCGATGCGGTGATCGTGATGGAGCAAGGGGAGGGTGGAAAATGA

Upstream 100 bases:

>100_bases
CACAGCTGTCACCTTTTCCGCCCGGCGTAGCGGTGAACCAGTGCGTCAGCACATCGGCGCTTCATCGGGCTCCACAGACT
TCCGCATCGAGAGAACAAAT

Downstream 100 bases:

>100_bases
GCACGTCCGGTGCCACCCTTGCGGCCCCCGCGGCCCCTGCGGCGAATGCAGCCGCAGCGCCGCCACTCGCGGGCGTGCGC
GTCGTCGACCTGACCGAACT

Product: pimeloyl-CoA synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 708; Mature: 708

Protein sequence:

>708_residues
METYQDLSRLVSPRSIALVGASDRSGSIGARALENLMDHSDFKGDVYLVNATKPEVAGRKAWPDVASLPSVPDTALVAVP
AEHVLAVLEQCGEKGVRFAIILTSGFGEAGEEGKAAEQTMKEIVARTGMRIYGPNCPGLTNITERLGFTFSPSFRHDLRG
GPVGLATQGGGLGRNVLQAMDRGIGVALWSSSGNEVDLQVSDFIHYMADAPDIKVIATLLEGVNDGRKFVAAVQHAARKG
KPVVVLKVGRSEYGRKAAQSHTASITGSAEVNSAVFAQLGVVEVDDIDELIDTAWLFARGMPRQGGALAIYSGSGGTAAL
CADMVGNAGLKLAEFAPETLAVLRDALPSYAAIDNPIDTTTAVMAKPELARTCLQAVCNDPSVSLVLLPQALEYGDITKL
AADITADVQKESPVPMLPIWMSERQGGAYKVFADAGLAPVRSISKAVKAVERWMGYADWRARADIDFKPLMQTAARPVAD
VPTRALSEPEGKAMLRAAGIAIPVSRVAATLAQARLLAREVGYPLVAKVVSEQIQHKSDVGGVVVGIHDDAGLEAAWESI
HTSVKRNMPDARIDGILLEHMAAPGGLEILIGVSRDPVFGHILTFGLGGIYVEVFKDVSRRMLPLSATEAEAMIREVRCF
PLLDGARGKPRRDIAALTALLVKVSDFVVAHGDHLVEMDLNPVWVGVAGEGALPLDAVIVMEQGEGGK

Sequences:

>Translated_708_residues
METYQDLSRLVSPRSIALVGASDRSGSIGARALENLMDHSDFKGDVYLVNATKPEVAGRKAWPDVASLPSVPDTALVAVP
AEHVLAVLEQCGEKGVRFAIILTSGFGEAGEEGKAAEQTMKEIVARTGMRIYGPNCPGLTNITERLGFTFSPSFRHDLRG
GPVGLATQGGGLGRNVLQAMDRGIGVALWSSSGNEVDLQVSDFIHYMADAPDIKVIATLLEGVNDGRKFVAAVQHAARKG
KPVVVLKVGRSEYGRKAAQSHTASITGSAEVNSAVFAQLGVVEVDDIDELIDTAWLFARGMPRQGGALAIYSGSGGTAAL
CADMVGNAGLKLAEFAPETLAVLRDALPSYAAIDNPIDTTTAVMAKPELARTCLQAVCNDPSVSLVLLPQALEYGDITKL
AADITADVQKESPVPMLPIWMSERQGGAYKVFADAGLAPVRSISKAVKAVERWMGYADWRARADIDFKPLMQTAARPVAD
VPTRALSEPEGKAMLRAAGIAIPVSRVAATLAQARLLAREVGYPLVAKVVSEQIQHKSDVGGVVVGIHDDAGLEAAWESI
HTSVKRNMPDARIDGILLEHMAAPGGLEILIGVSRDPVFGHILTFGLGGIYVEVFKDVSRRMLPLSATEAEAMIREVRCF
PLLDGARGKPRRDIAALTALLVKVSDFVVAHGDHLVEMDLNPVWVGVAGEGALPLDAVIVMEQGEGGK
>Mature_708_residues
METYQDLSRLVSPRSIALVGASDRSGSIGARALENLMDHSDFKGDVYLVNATKPEVAGRKAWPDVASLPSVPDTALVAVP
AEHVLAVLEQCGEKGVRFAIILTSGFGEAGEEGKAAEQTMKEIVARTGMRIYGPNCPGLTNITERLGFTFSPSFRHDLRG
GPVGLATQGGGLGRNVLQAMDRGIGVALWSSSGNEVDLQVSDFIHYMADAPDIKVIATLLEGVNDGRKFVAAVQHAARKG
KPVVVLKVGRSEYGRKAAQSHTASITGSAEVNSAVFAQLGVVEVDDIDELIDTAWLFARGMPRQGGALAIYSGSGGTAAL
CADMVGNAGLKLAEFAPETLAVLRDALPSYAAIDNPIDTTTAVMAKPELARTCLQAVCNDPSVSLVLLPQALEYGDITKL
AADITADVQKESPVPMLPIWMSERQGGAYKVFADAGLAPVRSISKAVKAVERWMGYADWRARADIDFKPLMQTAARPVAD
VPTRALSEPEGKAMLRAAGIAIPVSRVAATLAQARLLAREVGYPLVAKVVSEQIQHKSDVGGVVVGIHDDAGLEAAWESI
HTSVKRNMPDARIDGILLEHMAAPGGLEILIGVSRDPVFGHILTFGLGGIYVEVFKDVSRRMLPLSATEAEAMIREVRCF
PLLDGARGKPRRDIAALTALLVKVSDFVVAHGDHLVEMDLNPVWVGVAGEGALPLDAVIVMEQGEGGK

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfiQ [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=732, Percent_Identity=28.1420765027322, Blast_Score=226, Evalue=4e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014089
- InterPro:   IPR013650
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR005809
- InterPro:   IPR016102 [H]

Pfam domain/function: PF08442 ATP-grasp_2; PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 74943; Mature: 74943

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METYQDLSRLVSPRSIALVGASDRSGSIGARALENLMDHSDFKGDVYLVNATKPEVAGRK
CCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
AWPDVASLPSVPDTALVAVPAEHVLAVLEQCGEKGVRFAIILTSGFGEAGEEGKAAEQTM
CCCCHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHH
KEIVARTGMRIYGPNCPGLTNITERLGFTFSPSFRHDLRGGPVGLATQGGGLGRNVLQAM
HHHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHH
DRGIGVALWSSSGNEVDLQVSDFIHYMADAPDIKVIATLLEGVNDGRKFVAAVQHAARKG
HCCCEEEEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
KPVVVLKVGRSEYGRKAAQSHTASITGSAEVNSAVFAQLGVVEVDDIDELIDTAWLFARG
CCEEEEEECCCHHHHHHHHCCCCEECCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCC
MPRQGGALAIYSGSGGTAALCADMVGNAGLKLAEFAPETLAVLRDALPSYAAIDNPIDTT
CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHCCCHHHCCCCCCCH
TAVMAKPELARTCLQAVCNDPSVSLVLLPQALEYGDITKLAADITADVQKESPVPMLPIW
HHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
MSERQGGAYKVFADAGLAPVRSISKAVKAVERWMGYADWRARADIDFKPLMQTAARPVAD
ECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHH
VPTRALSEPEGKAMLRAAGIAIPVSRVAATLAQARLLAREVGYPLVAKVVSEQIQHKSDV
CCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GGVVVGIHDDAGLEAAWESIHTSVKRNMPDARIDGILLEHMAAPGGLEILIGVSRDPVFG
CCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
HILTFGLGGIYVEVFKDVSRRMLPLSATEAEAMIREVRCFPLLDGARGKPRRDIAALTAL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHHH
LVKVSDFVVAHGDHLVEMDLNPVWVGVAGEGALPLDAVIVMEQGEGGK
HHHHHHHHEECCCEEEEECCCEEEEEECCCCCCCEEEEEEEECCCCCC
>Mature Secondary Structure
METYQDLSRLVSPRSIALVGASDRSGSIGARALENLMDHSDFKGDVYLVNATKPEVAGRK
CCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
AWPDVASLPSVPDTALVAVPAEHVLAVLEQCGEKGVRFAIILTSGFGEAGEEGKAAEQTM
CCCCHHCCCCCCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHH
KEIVARTGMRIYGPNCPGLTNITERLGFTFSPSFRHDLRGGPVGLATQGGGLGRNVLQAM
HHHHHHCCCEEECCCCCCHHHHHHHCCCCCCCCHHHHCCCCCEEEEECCCCCHHHHHHHH
DRGIGVALWSSSGNEVDLQVSDFIHYMADAPDIKVIATLLEGVNDGRKFVAAVQHAARKG
HCCCEEEEECCCCCEEEEEHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
KPVVVLKVGRSEYGRKAAQSHTASITGSAEVNSAVFAQLGVVEVDDIDELIDTAWLFARG
CCEEEEEECCCHHHHHHHHCCCCEECCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCC
MPRQGGALAIYSGSGGTAALCADMVGNAGLKLAEFAPETLAVLRDALPSYAAIDNPIDTT
CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHCCCHHHCCCCCCCH
TAVMAKPELARTCLQAVCNDPSVSLVLLPQALEYGDITKLAADITADVQKESPVPMLPIW
HHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEE
MSERQGGAYKVFADAGLAPVRSISKAVKAVERWMGYADWRARADIDFKPLMQTAARPVAD
ECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHH
VPTRALSEPEGKAMLRAAGIAIPVSRVAATLAQARLLAREVGYPLVAKVVSEQIQHKSDV
CCHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GGVVVGIHDDAGLEAAWESIHTSVKRNMPDARIDGILLEHMAAPGGLEILIGVSRDPVFG
CCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
HILTFGLGGIYVEVFKDVSRRMLPLSATEAEAMIREVRCFPLLDGARGKPRRDIAALTAL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCEECCCCCCCCHHHHHHHHHH
LVKVSDFVVAHGDHLVEMDLNPVWVGVAGEGALPLDAVIVMEQGEGGK
HHHHHHHHEECCCEEEEECCCEEEEEECCCCCCCEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]