| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is ssuD1 [H]
Identifier: 94311156
GI number: 94311156
Start: 2431898
End: 2432989
Strand: Direct
Name: ssuD1 [H]
Synonym: Rmet_2218
Alternate gene names: 94311156
Gene position: 2431898-2432989 (Clockwise)
Preceding gene: 94311150
Following gene: 94311157
Centisome position: 61.91
GC content: 67.67
Gene sequence:
>1092_bases ATGAGCGTCGACATCATCGGCATGATCCAGAGCCAGAAGCAGTCCGAGATTCACCCTCCTGACGGGCCCGTGATCGATCG CGACTACGTGCGTGCATTCGCGCAGGCCCATGAGCAGGCCGGGTTCGACCGCATCCTGGTACCTCACCACTCGACCGGGC CATCGGCCACGCTGACGATCTCCTACGCGGCCACCGTGACCGAGCGCATCCATTTCATGCTGGCGCATCGCCCCGGCTTC ACCGCGCCGACGCTGGCCGCCCGGCAGATCGCCACGCTCGACCAGTTCAGCGGCGGCCGGCTTGGGGTGCATTTCATCTC GGGCGGGTCAGACGACGAACAGCGGCGCGACGGCGACTATCTCGATCACGACCAGCGCTATGCCCGTACCGACGAGTACC TTGGCATCCTGCGCCGCATCTGGACAGAGCACCAGCCCTTCGATCACGAGGGCACGTTCTACCGCTTCCAGCGCGGCTTC TCCGAAGTCAAACCCGCCCAGCAGCCGCATGTGCCGATCTACTTCGGCGGTGCTTCCGAAGCAGCGCTCGCCGTGGCCGG CAAACATGCCGACGTCTACGCGCTGTGGGGCGAATCCCTCGACCAGGTACGCGAGCTGACCACGCGCGTGCGTGCCGAGG CCGCCAGGCATGCCCGCGAGGTGCGTTTCTCGGTGTCGTTCCGGCCCGTGCTGGCGGACACCGAGGAAAAGGCGTGGGCG CGCGCCGACAGCATCCTGGAACGCACCCGCGCGTTGCGCGTGCAGGCCGGCTACAGCCGTGGCGGCCCACAACAGAGCGA GGGCGCGCGTCGCCTGCTCGCCGCCGCCGACAAGGGCGACCGCGTTGATCAACGTCTATGGACCGCCATCGCGCGCGAAA CCGGCGGCCGTTCGAATTCGACCGGTCTGGTTGGCACGCCGGAACAGGTGGCCGAGGCGTTGCTGGCCTACTACGACCTC GGCGTCAGCACGTTCCTGCTCCGCGGCTTCGATCCGCTTGACGATGCCGTCGACTACGGTCGCGAACTGATTCCGCGCGT GCGCGCGCTCGTTGCGCAACGCGATGCCGAGCGCCAGCGCAAGGCAGCCTGA
Upstream 100 bases:
>100_bases TTCCCAACGCATATGGAGTCGCGTTTTTATTCGTTCTCGCGCGGCGCGCGCTGGCTTACGGTGGCGGCTCGAACCGTTTC ACGAACCAGGAGCGTCACCC
Downstream 100 bases:
>100_bases ACCGGCCTGAACAACTGAAAACGGGGAGAAAAAACCATGAGCCAGCAGCCGTCCCAAAAGTCGTCCCGCCCTGACAATCG TCGCCGCAGCCTGCTACGCC
Product: alkanesulfonate monooxygenase, FMNH(2)-dependent
Products: NA
Alternate protein names: FMNH2-dependent aliphatic sulfonate monooxygenase [H]
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSVDIIGMIQSQKQSEIHPPDGPVIDRDYVRAFAQAHEQAGFDRILVPHHSTGPSATLTISYAATVTERIHFMLAHRPGF TAPTLAARQIATLDQFSGGRLGVHFISGGSDDEQRRDGDYLDHDQRYARTDEYLGILRRIWTEHQPFDHEGTFYRFQRGF SEVKPAQQPHVPIYFGGASEAALAVAGKHADVYALWGESLDQVRELTTRVRAEAARHAREVRFSVSFRPVLADTEEKAWA RADSILERTRALRVQAGYSRGGPQQSEGARRLLAAADKGDRVDQRLWTAIARETGGRSNSTGLVGTPEQVAEALLAYYDL GVSTFLLRGFDPLDDAVDYGRELIPRVRALVAQRDAERQRKAA
Sequences:
>Translated_363_residues MSVDIIGMIQSQKQSEIHPPDGPVIDRDYVRAFAQAHEQAGFDRILVPHHSTGPSATLTISYAATVTERIHFMLAHRPGF TAPTLAARQIATLDQFSGGRLGVHFISGGSDDEQRRDGDYLDHDQRYARTDEYLGILRRIWTEHQPFDHEGTFYRFQRGF SEVKPAQQPHVPIYFGGASEAALAVAGKHADVYALWGESLDQVRELTTRVRAEAARHAREVRFSVSFRPVLADTEEKAWA RADSILERTRALRVQAGYSRGGPQQSEGARRLLAAADKGDRVDQRLWTAIARETGGRSNSTGLVGTPEQVAEALLAYYDL GVSTFLLRGFDPLDDAVDYGRELIPRVRALVAQRDAERQRKAA >Mature_362_residues SVDIIGMIQSQKQSEIHPPDGPVIDRDYVRAFAQAHEQAGFDRILVPHHSTGPSATLTISYAATVTERIHFMLAHRPGFT APTLAARQIATLDQFSGGRLGVHFISGGSDDEQRRDGDYLDHDQRYARTDEYLGILRRIWTEHQPFDHEGTFYRFQRGFS EVKPAQQPHVPIYFGGASEAALAVAGKHADVYALWGESLDQVRELTTRVRAEAARHAREVRFSVSFRPVLADTEEKAWAR ADSILERTRALRVQAGYSRGGPQQSEGARRLLAAADKGDRVDQRLWTAIARETGGRSNSTGLVGTPEQVAEALLAYYDLG VSTFLLRGFDPLDDAVDYGRELIPRVRALVAQRDAERQRKAA
Specific function: Catalyzes the desulfonation of aliphatic sulfonates [H]
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SsuD family [H]
Homologues:
Organism=Escherichia coli, GI1787166, Length=329, Percent_Identity=34.0425531914894, Blast_Score=178, Evalue=6e-46, Organism=Escherichia coli, GI1787247, Length=186, Percent_Identity=27.4193548387097, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019911 - InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.14.5 [H]
Molecular weight: Translated: 40433; Mature: 40301
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDIIGMIQSQKQSEIHPPDGPVIDRDYVRAFAQAHEQAGFDRILVPHHSTGPSATLTI CCCEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE SYAATVTERIHFMLAHRPGFTAPTLAARQIATLDQFSGGRLGVHFISGGSDDEQRRDGDY EHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCCC LDHDQRYARTDEYLGILRRIWTEHQPFDHEGTFYRFQRGFSEVKPAQQPHVPIYFGGASE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCC AALAVAGKHADVYALWGESLDQVRELTTRVRAEAARHAREVRFSVSFRPVLADTEEKAWA CEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHH RADSILERTRALRVQAGYSRGGPQQSEGARRLLAAADKGDRVDQRLWTAIARETGGRSNS HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC TGLVGTPEQVAEALLAYYDLGVSTFLLRGFDPLDDAVDYGRELIPRVRALVAQRDAERQR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAA CCC >Mature Secondary Structure SVDIIGMIQSQKQSEIHPPDGPVIDRDYVRAFAQAHEQAGFDRILVPHHSTGPSATLTI CCEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEE SYAATVTERIHFMLAHRPGFTAPTLAARQIATLDQFSGGRLGVHFISGGSDDEQRRDGDY EHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHCCCCC LDHDQRYARTDEYLGILRRIWTEHQPFDHEGTFYRFQRGFSEVKPAQQPHVPIYFGGASE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCC AALAVAGKHADVYALWGESLDQVRELTTRVRAEAARHAREVRFSVSFRPVLADTEEKAWA CEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHH RADSILERTRALRVQAGYSRGGPQQSEGARRLLAAADKGDRVDQRLWTAIARETGGRSNS HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCC TGLVGTPEQVAEALLAYYDLGVSTFLLRGFDPLDDAVDYGRELIPRVRALVAQRDAERQR CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA