| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311157
Identifier: 94311157
GI number: 94311157
Start: 2433026
End: 2434051
Strand: Direct
Name: 94311157
Synonym: Rmet_2219
Alternate gene names: NA
Gene position: 2433026-2434051 (Clockwise)
Preceding gene: 94311156
Following gene: 94311158
Centisome position: 61.94
GC content: 65.11
Gene sequence:
>1026_bases ATGAGCCAGCAGCCGTCCCAAAAGTCGTCCCGCCCTGACAATCGTCGCCGCAGCCTGCTACGCCTGGCCGGCACCACGGC TATCGCCGCGCCCGCGCTGATCCTGGGCCGACAGGCTTGGTCGGCCCCGCGCAAGCTCACCTTCGCGTGGAACCAGAATT CCTTCTGCCTGACGCCTATCGTCGTGGCGCAGGAGAAAGGCTTCTTCGAAAAGAACGGCTTGCAGGTGGATCTGATCAAC TACAGCGGGTCCACGGACCAGTTGCTCGAGTCGATCGCCACCGGCAAGGCCGATGCCGCCGTGGGCATGATTCATCGCTG GCTCAAGCCGCTCGAAGCCGGCTTCGACGTGAAGATCATCGGCAGCTCGCACGGCGGCTGCGTGCGGCTGGTTGGCGCGA AGGCGGCCGGCGTCACGAACCTTCAGGCACTCAAGGGCAAGACCGTCGGCGTCAGCGACCTGGCCGCACCGGGCAAGCAT TTCTTCACGATCCTGCTGGCCAAGAACGGCATCGACCCCGACCGCGACATCACCTGGCGGCAGTACCCGGCCGACCTGCT CGGTGTGGCCGTCGACAAGGGCGAGATCCAGGCAATCGCCGATGGCGACCCGAACCTCTACCTGCTGGAGAAGCGCACCA ACGGCGCGTACGTGGAACTGGCCACCAACCTGACGGGCGAATACGCACGGAAGGTCTGCTGCGTGGTGGGGGCGCGGGGC GAGCTGGTTCGCAACGATCGCCCGACAGCGGCCGCGCTGGCGCGTTCGATCGTGCAGGCGACGGACTACGTCAACGAGAA CCCCAACGAGGCGGCAAAGGTGTTCGCCAAGTACTCGCCCAAGATCAGCCCGGACGATCTGCGCAAGCTCTACGCCACGC TCACCTACACGCACCACCCGACCGGTGTGGATCTGCAGGAGGAGATCGCGTTCTACGCCGACGACTTCCGCCGCATTGGT GTGCTCAAGAAGTCCACCGATGCCAAACGCCTGGCGCAGCATGTCTACGCCAACGTGCTGGGGTAA
Upstream 100 bases:
>100_bases GATTCCGCGCGTGCGCGCGCTCGTTGCGCAACGCGATGCCGAGCGCCAGCGCAAGGCAGCCTGAACCGGCCTGAACAACT GAAAACGGGGAGAAAAAACC
Downstream 100 bases:
>100_bases GACCATGACGACCAACCAAAGCACCCTTAACGCGCGGCTCGCGCAACCCGCCCCCAGGACCGTCGCCCCACGCGTGACGG TCTGGCCCACGGGCATCGTG
Product: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic protein
Products: NA
Alternate protein names: NMT1/THI5-Like Protein; Tat Pathway Signal Sequence Domain-Containing Protein; NLPA Lipoprotein; Nitrate Transport Protein NrtA; Lipoprotein
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSQQPSQKSSRPDNRRRSLLRLAGTTAIAAPALILGRQAWSAPRKLTFAWNQNSFCLTPIVVAQEKGFFEKNGLQVDLIN YSGSTDQLLESIATGKADAAVGMIHRWLKPLEAGFDVKIIGSSHGGCVRLVGAKAAGVTNLQALKGKTVGVSDLAAPGKH FFTILLAKNGIDPDRDITWRQYPADLLGVAVDKGEIQAIADGDPNLYLLEKRTNGAYVELATNLTGEYARKVCCVVGARG ELVRNDRPTAAALARSIVQATDYVNENPNEAAKVFAKYSPKISPDDLRKLYATLTYTHHPTGVDLQEEIAFYADDFRRIG VLKKSTDAKRLAQHVYANVLG
Sequences:
>Translated_341_residues MSQQPSQKSSRPDNRRRSLLRLAGTTAIAAPALILGRQAWSAPRKLTFAWNQNSFCLTPIVVAQEKGFFEKNGLQVDLIN YSGSTDQLLESIATGKADAAVGMIHRWLKPLEAGFDVKIIGSSHGGCVRLVGAKAAGVTNLQALKGKTVGVSDLAAPGKH FFTILLAKNGIDPDRDITWRQYPADLLGVAVDKGEIQAIADGDPNLYLLEKRTNGAYVELATNLTGEYARKVCCVVGARG ELVRNDRPTAAALARSIVQATDYVNENPNEAAKVFAKYSPKISPDDLRKLYATLTYTHHPTGVDLQEEIAFYADDFRRIG VLKKSTDAKRLAQHVYANVLG >Mature_340_residues SQQPSQKSSRPDNRRRSLLRLAGTTAIAAPALILGRQAWSAPRKLTFAWNQNSFCLTPIVVAQEKGFFEKNGLQVDLINY SGSTDQLLESIATGKADAAVGMIHRWLKPLEAGFDVKIIGSSHGGCVRLVGAKAAGVTNLQALKGKTVGVSDLAAPGKHF FTILLAKNGIDPDRDITWRQYPADLLGVAVDKGEIQAIADGDPNLYLLEKRTNGAYVELATNLTGEYARKVCCVVGARGE LVRNDRPTAAALARSIVQATDYVNENPNEAAKVFAKYSPKISPDDLRKLYATLTYTHHPTGVDLQEEIAFYADDFRRIGV LKKSTDAKRLAQHVYANVLG
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37048; Mature: 36916
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQPSQKSSRPDNRRRSLLRLAGTTAIAAPALILGRQAWSAPRKLTFAWNQNSFCLTPI CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEE VVAQEKGFFEKNGLQVDLINYSGSTDQLLESIATGKADAAVGMIHRWLKPLEAGFDVKII EEECCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEE GSSHGGCVRLVGAKAAGVTNLQALKGKTVGVSDLAAPGKHFFTILLAKNGIDPDRDITWR ECCCCCEEEEEECCCCCCCCHHHHCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCHH QYPADLLGVAVDKGEIQAIADGDPNLYLLEKRTNGAYVELATNLTGEYARKVCCVVGARG HCCHHHHHEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHEECCCC ELVRNDRPTAAALARSIVQATDYVNENPNEAAKVFAKYSPKISPDDLRKLYATLTYTHHP CEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHEEEECC TGVDLQEEIAFYADDFRRIGVLKKSTDAKRLAQHVYANVLG CCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SQQPSQKSSRPDNRRRSLLRLAGTTAIAAPALILGRQAWSAPRKLTFAWNQNSFCLTPI CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEE VVAQEKGFFEKNGLQVDLINYSGSTDQLLESIATGKADAAVGMIHRWLKPLEAGFDVKII EEECCCCCEECCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEE GSSHGGCVRLVGAKAAGVTNLQALKGKTVGVSDLAAPGKHFFTILLAKNGIDPDRDITWR ECCCCCEEEEEECCCCCCCCHHHHCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCHH QYPADLLGVAVDKGEIQAIADGDPNLYLLEKRTNGAYVELATNLTGEYARKVCCVVGARG HCCHHHHHEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHEECCCC ELVRNDRPTAAALARSIVQATDYVNENPNEAAKVFAKYSPKISPDDLRKLYATLTYTHHP CEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHEEEECC TGVDLQEEIAFYADDFRRIGVLKKSTDAKRLAQHVYANVLG CCCCHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA