| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is uspA7
Identifier: 94311150
GI number: 94311150
Start: 2425612
End: 2426505
Strand: Direct
Name: uspA7
Synonym: Rmet_2212
Alternate gene names: NA
Gene position: 2425612-2426505 (Clockwise)
Preceding gene: 94311149
Following gene: 94311156
Centisome position: 61.75
GC content: 67.23
Gene sequence:
>894_bases ATGCCCATGACGACTCTCCCCGCCACCTCCCCGCCTGCCAGCCTGATGCTGGCCACCGACCTGAGCCCACGCTGCGATCG CGCCCTGGACCGTGCAGCGGGACTGGCCCAAGAATGGAAGGCCGAACTGATCGTGGCCCATGTGCTCGACCCCGCCGCGC ACCCGGACCAGGCACTGGCCTGGGCTGCCGATACCGGCGGTGACGGCGATGCCCTGCACATCGCCCGCCGACAGATCGAT CGTGACCTGGCCGGACTACCCGTACGTGCCGAGGTGCGAATCATGAAGTCCCGGGATATCTCGGAGACGATCCGCAACAT GGCAACCGTTTCCGGCGTCGGTCTGGTGGTCGCCGGCGTTGCGCGGTATGAGTTGCTTGGCCGGTTCCTGCTCGGCTCTA GTGTCGAGCGCCTGGCGCGCACGCTCGCGCAGCCGTTGCTGATAGTGCGTAATCGCCCGCACGCGCCCTACCGCCGGATC GTTGTGGCCACCGACTTCTCCGAAGCCTCGCGTAATGCGCTGCTGACGGCGGCGCAGCTTTTCCCGGGATGCGAACTAAC GGCTTTTCATGCCTACCTGCCGCCTTTCGCGGGGCTGACCGACACGCAACCGCAGCCTGCCTCCGCGCAAGCGCAGGAGC GAGCGCAGTACGACGCATTCATCGCTGCCACCGCCTTGCCCGCTGGAACGCGCGTCACACCGCTGATTGTGCGTGGTGGG TTGGAATTGCACCTGACCCAGCACGTCCGCCAGCACGATGTCGACCTGGTGGTGATGGGCGCGCAGGGTCGCGATGCCCT GACTGGCGCGTTGCTGGGCAGCACTGCCGCAAAACTGCTCGACTGCCTGCCCTGCGACTCAATGGTCGTGCCCCGGCCGC GCTCGGCGGGTTGA
Upstream 100 bases:
>100_bases GGTGTTCTGCGTCGCCGAACTCGAAAAGATCCTGATCCGACGCAAACCGGCTGGTAAGCGTCTGGCTGCCGATTGAATCT GCCGTTGAACGATTAGCGAG
Downstream 100 bases:
>100_bases AGGTATCGGGGAAAAAGGCAACCCGGCCAGACGGAGCGTCAACAATACCGATGTCCGCGACGTTCTCACGGTCGGGAGCC TTTGCGGTAGCCACGCCATG
Product: universal stress protein
Products: NA
Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Protein UspA; Usp-Like Protein; Universal Stress Family
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MPMTTLPATSPPASLMLATDLSPRCDRALDRAAGLAQEWKAELIVAHVLDPAAHPDQALAWAADTGGDGDALHIARRQID RDLAGLPVRAEVRIMKSRDISETIRNMATVSGVGLVVAGVARYELLGRFLLGSSVERLARTLAQPLLIVRNRPHAPYRRI VVATDFSEASRNALLTAAQLFPGCELTAFHAYLPPFAGLTDTQPQPASAQAQERAQYDAFIAATALPAGTRVTPLIVRGG LELHLTQHVRQHDVDLVVMGAQGRDALTGALLGSTAAKLLDCLPCDSMVVPRPRSAG
Sequences:
>Translated_297_residues MPMTTLPATSPPASLMLATDLSPRCDRALDRAAGLAQEWKAELIVAHVLDPAAHPDQALAWAADTGGDGDALHIARRQID RDLAGLPVRAEVRIMKSRDISETIRNMATVSGVGLVVAGVARYELLGRFLLGSSVERLARTLAQPLLIVRNRPHAPYRRI VVATDFSEASRNALLTAAQLFPGCELTAFHAYLPPFAGLTDTQPQPASAQAQERAQYDAFIAATALPAGTRVTPLIVRGG LELHLTQHVRQHDVDLVVMGAQGRDALTGALLGSTAAKLLDCLPCDSMVVPRPRSAG >Mature_296_residues PMTTLPATSPPASLMLATDLSPRCDRALDRAAGLAQEWKAELIVAHVLDPAAHPDQALAWAADTGGDGDALHIARRQIDR DLAGLPVRAEVRIMKSRDISETIRNMATVSGVGLVVAGVARYELLGRFLLGSSVERLARTLAQPLLIVRNRPHAPYRRIV VATDFSEASRNALLTAAQLFPGCELTAFHAYLPPFAGLTDTQPQPASAQAQERAQYDAFIAATALPAGTRVTPLIVRGGL ELHLTQHVRQHDVDLVVMGAQGRDALTGALLGSTAAKLLDCLPCDSMVVPRPRSAG
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31645; Mature: 31514
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMTTLPATSPPASLMLATDLSPRCDRALDRAAGLAQEWKAELIVAHVLDPAAHPDQALA CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEE WAADTGGDGDALHIARRQIDRDLAGLPVRAEVRIMKSRDISETIRNMATVSGVGLVVAGV EECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH ARYELLGRFLLGSSVERLARTLAQPLLIVRNRPHAPYRRIVVATDFSEASRNALLTAAQL HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHH FPGCELTAFHAYLPPFAGLTDTQPQPASAQAQERAQYDAFIAATALPAGTRVTPLIVRGG CCCCCEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC LELHLTQHVRQHDVDLVVMGAQGRDALTGALLGSTAAKLLDCLPCDSMVVPRPRSAG CEEHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC >Mature Secondary Structure PMTTLPATSPPASLMLATDLSPRCDRALDRAAGLAQEWKAELIVAHVLDPAAHPDQALA CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEE WAADTGGDGDALHIARRQIDRDLAGLPVRAEVRIMKSRDISETIRNMATVSGVGLVVAGV EECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH ARYELLGRFLLGSSVERLARTLAQPLLIVRNRPHAPYRRIVVATDFSEASRNALLTAAQL HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHH FPGCELTAFHAYLPPFAGLTDTQPQPASAQAQERAQYDAFIAATALPAGTRVTPLIVRGG CCCCCEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC LELHLTQHVRQHDVDLVVMGAQGRDALTGALLGSTAAKLLDCLPCDSMVVPRPRSAG CEEHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA