Click here to switch to the map view.

The map label for this gene is 94311005

Identifier: 94311005

GI number: 94311005

Start: 2239593

End: 2240468

Strand: Reverse

Name: 94311005

Synonym: Rmet_2067

Alternate gene names: NA

Gene position: 2240468-2239593 (Counterclockwise)

Preceding gene: 94311006

Following gene: 94311004

Centisome position: 57.04

GC content: 64.61

Gene sequence:

>876_bases
ATGCGCAACTGGATGATCCGGATCGGGGTGGCTGCGGCGGGGTTGCTGGCGAGCGCCTCGCTTGCTCTGGCGTCCGACGC
CAGCCCCGGAGCCTGCCGAGCCGGCACGCTCTATCTGACGTTTGATACTGGCAGCATGAGCCAGGCGGAACTGATCGCTC
GCACGTTGCGCAAGCACCATATCCGCGCCACGTTCTTCCTGGCCAACGAGCCCACGGTCAACCACGACAATTCGCTGGAT
CCAACTTGGGCGGCTTACTGGAAATCGCTGGCTGCCGACGGTCATGCCTTTGGCACCCACACGTTTGACCATGTCTACCT
TCGCAGCGCGAAGGGTGGCGAGGGCGGCAAGGTCGTCATGCGGCCGCAGTTCGGGGCGCAGGGTGGCAAGGACGTGGCGA
TGACCGAGGAATCGTTCTGCACGGAACTGCGCCGGAGCGCGCAAGCCTTCCAGTCGATGACCGGTCAGCCGATGGTGCCG
CTGTGGCGCGCCCCGGGTGGCCATACGTCGCCGAAGACGCTGGCATGGGCCGAGCAATGCGGCTTCAAGCATGTGGGCTG
GGCGCCGGCCGGTTTTCTCGGCGACGAACTGTCCTCAGAACGCTACCCTAACCAGATGTTGCTCGAACGTGCGCTGCGCG
ATCTGCGCGATGGCGATATCACGATGGCCCACCTGGGTATCTGGTCGCGCAAGGACCCCTGGGCGCCGGGCGTGCTGGAG
CCGCTGATCAGCGGGCTCGAGCAGAAGGGCTTCTGCTTCGCCACGCTGCGTGAGCATCCGCAGTACAAGCACTGGATTGC
GCAACGTGGTCCGGTGCGAGTGGAGCAGGCGGGGGAACAACCTCAAACATCGTCAGTATCGGGAGCCAAACGGTAA

Upstream 100 bases:

>100_bases
GTGGCCAGCCGCAAGATGATCAAGACGATCCGTGTCGGCAAATCGCCGCATGGCATCTACTTCCGCACGCGCGCCCCGCT
CTATTAAGAAGGTCAGCGCC

Downstream 100 bases:

>100_bases
TGTGGGACGCGCTCACCAACTGGCTTAACCTGTGGGTGGGCCAGATCGAAGCCACGGTCTTTCAGAACGTGGTGTTGCCC
GTGGTTTATAACCTCGGCTT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Xylanase/Chitin Deacetylase; Exported Polysaccharide Deacetylase; Lipoprotein Glycoside Hydrolase/Deacetylase; Lipoprotein Putative Polysaccharide Deacetylase; Polysaccharide Deacetylase Family

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRNWMIRIGVAAAGLLASASLALASDASPGACRAGTLYLTFDTGSMSQAELIARTLRKHHIRATFFLANEPTVNHDNSLD
PTWAAYWKSLAADGHAFGTHTFDHVYLRSAKGGEGGKVVMRPQFGAQGGKDVAMTEESFCTELRRSAQAFQSMTGQPMVP
LWRAPGGHTSPKTLAWAEQCGFKHVGWAPAGFLGDELSSERYPNQMLLERALRDLRDGDITMAHLGIWSRKDPWAPGVLE
PLISGLEQKGFCFATLREHPQYKHWIAQRGPVRVEQAGEQPQTSSVSGAKR

Sequences:

>Translated_291_residues
MRNWMIRIGVAAAGLLASASLALASDASPGACRAGTLYLTFDTGSMSQAELIARTLRKHHIRATFFLANEPTVNHDNSLD
PTWAAYWKSLAADGHAFGTHTFDHVYLRSAKGGEGGKVVMRPQFGAQGGKDVAMTEESFCTELRRSAQAFQSMTGQPMVP
LWRAPGGHTSPKTLAWAEQCGFKHVGWAPAGFLGDELSSERYPNQMLLERALRDLRDGDITMAHLGIWSRKDPWAPGVLE
PLISGLEQKGFCFATLREHPQYKHWIAQRGPVRVEQAGEQPQTSSVSGAKR
>Mature_291_residues
MRNWMIRIGVAAAGLLASASLALASDASPGACRAGTLYLTFDTGSMSQAELIARTLRKHHIRATFFLANEPTVNHDNSLD
PTWAAYWKSLAADGHAFGTHTFDHVYLRSAKGGEGGKVVMRPQFGAQGGKDVAMTEESFCTELRRSAQAFQSMTGQPMVP
LWRAPGGHTSPKTLAWAEQCGFKHVGWAPAGFLGDELSSERYPNQMLLERALRDLRDGDITMAHLGIWSRKDPWAPGVLE
PLISGLEQKGFCFATLREHPQYKHWIAQRGPVRVEQAGEQPQTSSVSGAKR

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31858; Mature: 31858

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNWMIRIGVAAAGLLASASLALASDASPGACRAGTLYLTFDTGSMSQAELIARTLRKHH
CCCEEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
IRATFFLANEPTVNHDNSLDPTWAAYWKSLAADGHAFGTHTFDHVYLRSAKGGEGGKVVM
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEE
RPQFGAQGGKDVAMTEESFCTELRRSAQAFQSMTGQPMVPLWRAPGGHTSPKTLAWAEQC
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHC
GFKHVGWAPAGFLGDELSSERYPNQMLLERALRDLRDGDITMAHLGIWSRKDPWAPGVLE
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH
PLISGLEQKGFCFATLREHPQYKHWIAQRGPVRVEQAGEQPQTSSVSGAKR
HHHHHHCCCCCEEEEHHCCCCHHHHHHCCCCEEHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRNWMIRIGVAAAGLLASASLALASDASPGACRAGTLYLTFDTGSMSQAELIARTLRKHH
CCCEEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC
IRATFFLANEPTVNHDNSLDPTWAAYWKSLAADGHAFGTHTFDHVYLRSAKGGEGGKVVM
CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEEEE
RPQFGAQGGKDVAMTEESFCTELRRSAQAFQSMTGQPMVPLWRAPGGHTSPKTLAWAEQC
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHC
GFKHVGWAPAGFLGDELSSERYPNQMLLERALRDLRDGDITMAHLGIWSRKDPWAPGVLE
CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHH
PLISGLEQKGFCFATLREHPQYKHWIAQRGPVRVEQAGEQPQTSSVSGAKR
HHHHHHCCCCCEEEEHHCCCCHHHHHHCCCCEEHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA