| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94311006
Identifier: 94311006
GI number: 94311006
Start: 2240482
End: 2241468
Strand: Reverse
Name: 94311006
Synonym: Rmet_2068
Alternate gene names: NA
Gene position: 2241468-2240482 (Counterclockwise)
Preceding gene: 94311007
Following gene: 94311005
Centisome position: 57.06
GC content: 62.31
Gene sequence:
>987_bases ATGCTCGCATTGCGTCGTGTTGTGGCTGGCGCTGTTTCGGTCGGCGCCCTGGCATTGGCATTGGTGTCCGCACCCGCCCG CGCGGAAGTTGTAGTAATCCTGAATTCAGGTGACGCAAGCGTTACTTTGATCGACAAGGACACGCAGAAGGTGTTGGAGA CTTTCCCGATCGGGAAGGAACCCCATCACCTGATCGCCACCCCCGACGACAAATCGCTGATCGTCGCCAATGCGGTTGGC AACGACCTCGTTTTCCTCGACCCGGTGACCGGCAAGGTGCAGCAGCGCGTGCCGAACATCGACGACCCGTACCAGATCGG CTTCTCGCCCGACCAGAAGTGGTTCATCGCCACCGGCAACCGGCTGGACCGCGTCGACGTCTATCGTTGGGACGGCCGCC AGCTCAAGATCGCCAAGCAGTTCCCGCTGGCCAAGACGCCGAGCCACATCGCGTTCACGGCCGACAGCAAGATTGCATTC ATCACGCTGCAGGACTCGAACCAGATCGCCGCAATCGATCTGACCACGCTGACCGTGCTCTGGACCATGGAGGCTGGCTC CGCGCCGGCCGGTATCTGGGTCACGCCTGACCAGAAGTACTTGCTGGTGGGTATGACGGGGGCTGACTACGTCGCCGTGA TCGACTGGCGTACCCGGACAGTGGTCAAGCAGATCCAGACTGGCAAGGGCGCGCACAACTTCCGCGCCGTGGGCGACAAG CGGCACCTGTTCCTGAGCAACCGGGTGTCTGGCTCGATAAGCATCATCGACCAGCAGACGCTGTCGAAGGTCGGCGAGAT CACGGGTCTGCTGCCGGGCCCGGACGACATGGAACTGACCGCCGATGGCAAGACGCTCTGGGTGACGTTCCGCTGGGCGC GCTCGGTTGGCCTGATCGATGTGGCCAGCCGCAAGATGATCAAGACGATCCGTGTCGGCAAATCGCCGCATGGCATCTAC TTCCGCACGCGCGCCCCGCTCTATTAA
Upstream 100 bases:
>100_bases TGTATCTAATTGTGATAGACCCTCAAGTTTGATGATTCACGTCATCGTACTGGTCGATTGAAACGTTAGAATGCGCGATT CGTCATGATTTAACGGTCTT
Downstream 100 bases:
>100_bases GAAGGTCAGCGCCATGCGCAACTGGATGATCCGGATCGGGGTGGCTGCGGCGGGGTTGCTGGCGAGCGCCTCGCTTGCTC TGGCGTCCGACGCCAGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: 40-Residue YVTN Family Beta-Propeller Repeat Protein; Surface Antigen Gene; Surface Layer Protein; YVTN Family Beta-Propeller Repeat Protein; Cytochrome D1 Heme Region; Cell Surface Protein; Beta-Propeller Repeat-Containing Protein; Yvtn Beta-Propeller Repeat-Containing Protein; Beta-Propeller Fold Protein; Signal Peptide; Surface Antigen; Triple Helix Repeat-Containing Collagen; Signal Peptide Protein; Yvtn Beta-Propeller Repeat Family Protein; 40-Residue Yvtn Family Beta-Propeller Repeat Protein; WD40 Domain-Containing Protein; Outer Membrane Protein; Glycine-Rich Cell Wall Protein; YVTN Beta-Propeller Repeat Family Protein; PGRS-Subfamily Gly-Rich Protein; IPT/TIG Domain Protein; Vegetative Incompatibility; Beta-Propeller Repeat Protein YVTN Family; Surface Antigen-Like Protein; Alkaline Serine Protease; Cytochrome D1 Heme Subunit; Serine/Threonine Protein Kinase; YVTN Family Beta-Propeller Repeat-Containing Protein; SGL Domain-Containing Protein; Secreted Protein; Lipoprotein; Exported Protein; YVTN Family Beta-Propeller Repeat Family Protein
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MLALRRVVAGAVSVGALALALVSAPARAEVVVILNSGDASVTLIDKDTQKVLETFPIGKEPHHLIATPDDKSLIVANAVG NDLVFLDPVTGKVQQRVPNIDDPYQIGFSPDQKWFIATGNRLDRVDVYRWDGRQLKIAKQFPLAKTPSHIAFTADSKIAF ITLQDSNQIAAIDLTTLTVLWTMEAGSAPAGIWVTPDQKYLLVGMTGADYVAVIDWRTRTVVKQIQTGKGAHNFRAVGDK RHLFLSNRVSGSISIIDQQTLSKVGEITGLLPGPDDMELTADGKTLWVTFRWARSVGLIDVASRKMIKTIRVGKSPHGIY FRTRAPLY
Sequences:
>Translated_328_residues MLALRRVVAGAVSVGALALALVSAPARAEVVVILNSGDASVTLIDKDTQKVLETFPIGKEPHHLIATPDDKSLIVANAVG NDLVFLDPVTGKVQQRVPNIDDPYQIGFSPDQKWFIATGNRLDRVDVYRWDGRQLKIAKQFPLAKTPSHIAFTADSKIAF ITLQDSNQIAAIDLTTLTVLWTMEAGSAPAGIWVTPDQKYLLVGMTGADYVAVIDWRTRTVVKQIQTGKGAHNFRAVGDK RHLFLSNRVSGSISIIDQQTLSKVGEITGLLPGPDDMELTADGKTLWVTFRWARSVGLIDVASRKMIKTIRVGKSPHGIY FRTRAPLY >Mature_328_residues MLALRRVVAGAVSVGALALALVSAPARAEVVVILNSGDASVTLIDKDTQKVLETFPIGKEPHHLIATPDDKSLIVANAVG NDLVFLDPVTGKVQQRVPNIDDPYQIGFSPDQKWFIATGNRLDRVDVYRWDGRQLKIAKQFPLAKTPSHIAFTADSKIAF ITLQDSNQIAAIDLTTLTVLWTMEAGSAPAGIWVTPDQKYLLVGMTGADYVAVIDWRTRTVVKQIQTGKGAHNFRAVGDK RHLFLSNRVSGSISIIDQQTLSKVGEITGLLPGPDDMELTADGKTLWVTFRWARSVGLIDVASRKMIKTIRVGKSPHGIY FRTRAPLY
Specific function: Unknown
COG id: COG3391
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35849; Mature: 35849
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALRRVVAGAVSVGALALALVSAPARAEVVVILNSGDASVTLIDKDTQKVLETFPIGKE CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCC PHHLIATPDDKSLIVANAVGNDLVFLDPVTGKVQQRVPNIDDPYQIGFSPDQKWFIATGN CCEEEECCCCCCEEEEEECCCCEEEECCCCCHHHHHCCCCCCCEEECCCCCCCEEEEECC RLDRVDVYRWDGRQLKIAKQFPLAKTPSHIAFTADSKIAFITLQDSNQIAAIDLTTLTVL CCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEEEEEEEEE WTMEAGSAPAGIWVTPDQKYLLVGMTGADYVAVIDWRTRTVVKQIQTGKGAHNFRAVGDK EEEECCCCCCEEEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCEEECCCC RHLFLSNRVSGSISIIDQQTLSKVGEITGLLPGPDDMELTADGKTLWVTFRWARSVGLID EEEEEECCCCCEEEEEEHHHHHHHHHHEECCCCCCCCEEEECCCEEEEEEEECCCCCEEE VASRKMIKTIRVGKSPHGIYFRTRAPLY HHHHHHHHHHHCCCCCCCEEEEECCCCC >Mature Secondary Structure MLALRRVVAGAVSVGALALALVSAPARAEVVVILNSGDASVTLIDKDTQKVLETFPIGKE CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHCCCCCC PHHLIATPDDKSLIVANAVGNDLVFLDPVTGKVQQRVPNIDDPYQIGFSPDQKWFIATGN CCEEEECCCCCCEEEEEECCCCEEEECCCCCHHHHHCCCCCCCEEECCCCCCCEEEEECC RLDRVDVYRWDGRQLKIAKQFPLAKTPSHIAFTADSKIAFITLQDSNQIAAIDLTTLTVL CCCEEEEEEECCCEEEEEECCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEEEEEEEEE WTMEAGSAPAGIWVTPDQKYLLVGMTGADYVAVIDWRTRTVVKQIQTGKGAHNFRAVGDK EEEECCCCCCEEEECCCCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCEEECCCC RHLFLSNRVSGSISIIDQQTLSKVGEITGLLPGPDDMELTADGKTLWVTFRWARSVGLID EEEEEECCCCCEEEEEEHHHHHHHHHHEECCCCCCCCEEEECCCEEEEEEEECCCCCEEE VASRKMIKTIRVGKSPHGIYFRTRAPLY HHHHHHHHHHHCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA