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The map label for this gene is 94311004

Identifier: 94311004

GI number: 94311004

Start: 2238598

End: 2239593

Strand: Reverse

Name: 94311004

Synonym: Rmet_2066

Alternate gene names: NA

Gene position: 2239593-2238598 (Counterclockwise)

Preceding gene: 94311005

Following gene: 94311003

Centisome position: 57.01

GC content: 62.45

Gene sequence:

>996_bases
ATGTGGGACGCGCTCACCAACTGGCTTAACCTGTGGGTGGGCCAGATCGAAGCCACGGTCTTTCAGAACGTGGTGTTGCC
CGTGGTTTATAACCTCGGCTTCGGTGGCTATGCCGAAGACGCGTTCACCGGCACGGAGTGGCTGCTGGTCGGGTTGGTCC
AGATCGCCGTGATGGTCCTGATCCTCGGACCGCTCGAGAGACTGCGGCCGGTTGAGGTCGTGACCGACCGCGCGGCCATT
CGCACCGATATCCTCTACACGCTCATCCATCGACTGGGGCTGTTCCGGCTAGCGATGTTCTTCCTGCTGGCACCGTTGAT
GGATGGCATCGAAGGCCATCTGCGATTGCTGGGCTGGCAGCGTGTCAACGTCGAGGACTGGTGGCCCGGCGTGACGTCGA
TCCCGCTGATCAGCTTTTCCCTCTATCTGGCGCTGTTCGACCTGCTCGACTACTGGTATCACCGGCTGTCGCATACGTAC
CGCTGGTGGTGGAGCCTGCACGCGGTGCACCACAGCCAGCGCCAAATGACGCTCTGGAGCGACAACCGCAATCATCTGCT
CGACGATATTCTGCGCGATTTCGTTTTCGCGGCTGTTGCGCTGGCGGTAGGGGTCGAGCCGTCGCAGTACGTCCTGCTTG
TAGCGCTGTCGCAATTGCTGCAGAGCCTGCAGCACGCCAATCTGCGGCTGCACTTCGGCTGGCTGGGCGAGCGCCTGCTG
ATTTCTCCGCGCTTCCATCGCACGCACCACGCGGTGGGGCTTGGTCATGAAAAACGCGCCACGGCGGAAAAGCCCGCGCG
GCTCGGCGGGTGCAACTATGGCGTGATCTTCCCTTGGTGGGACATGCTTTTTGGCACCGCGGACTTCACCGACGTCTATC
ATCCAACCGGCATCCGCGACCAGATGCCGCCACCTGCCGGGCGTGCGCGTAGCTACGGCGATGGCTTCCTGTCGCAGCAA
TGGCTTGGCATCAAGCGGTTGCTGCGCCTGGGGTAG

Upstream 100 bases:

>100_bases
ATCCGCAGTACAAGCACTGGATTGCGCAACGTGGTCCGGTGCGAGTGGAGCAGGCGGGGGAACAACCTCAAACATCGTCA
GTATCGGGAGCCAAACGGTA

Downstream 100 bases:

>100_bases
GTTCCTTTCTGGTCGGCTCCAGCGCCACTTCGCGCGCATTTCCGAGGGTTTCCGGAAACACGATCGCCGGGCTGTGCTAG
GCTCCGAGGGCTTCTTTCAC

Product: C-5 sterol desaturase

Products: NA

Alternate protein names: Transmembrane Protein; Sterol Desaturase; Fatty Acid Hydroxylase Superfamily; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MWDALTNWLNLWVGQIEATVFQNVVLPVVYNLGFGGYAEDAFTGTEWLLVGLVQIAVMVLILGPLERLRPVEVVTDRAAI
RTDILYTLIHRLGLFRLAMFFLLAPLMDGIEGHLRLLGWQRVNVEDWWPGVTSIPLISFSLYLALFDLLDYWYHRLSHTY
RWWWSLHAVHHSQRQMTLWSDNRNHLLDDILRDFVFAAVALAVGVEPSQYVLLVALSQLLQSLQHANLRLHFGWLGERLL
ISPRFHRTHHAVGLGHEKRATAEKPARLGGCNYGVIFPWWDMLFGTADFTDVYHPTGIRDQMPPPAGRARSYGDGFLSQQ
WLGIKRLLRLG

Sequences:

>Translated_331_residues
MWDALTNWLNLWVGQIEATVFQNVVLPVVYNLGFGGYAEDAFTGTEWLLVGLVQIAVMVLILGPLERLRPVEVVTDRAAI
RTDILYTLIHRLGLFRLAMFFLLAPLMDGIEGHLRLLGWQRVNVEDWWPGVTSIPLISFSLYLALFDLLDYWYHRLSHTY
RWWWSLHAVHHSQRQMTLWSDNRNHLLDDILRDFVFAAVALAVGVEPSQYVLLVALSQLLQSLQHANLRLHFGWLGERLL
ISPRFHRTHHAVGLGHEKRATAEKPARLGGCNYGVIFPWWDMLFGTADFTDVYHPTGIRDQMPPPAGRARSYGDGFLSQQ
WLGIKRLLRLG
>Mature_331_residues
MWDALTNWLNLWVGQIEATVFQNVVLPVVYNLGFGGYAEDAFTGTEWLLVGLVQIAVMVLILGPLERLRPVEVVTDRAAI
RTDILYTLIHRLGLFRLAMFFLLAPLMDGIEGHLRLLGWQRVNVEDWWPGVTSIPLISFSLYLALFDLLDYWYHRLSHTY
RWWWSLHAVHHSQRQMTLWSDNRNHLLDDILRDFVFAAVALAVGVEPSQYVLLVALSQLLQSLQHANLRLHFGWLGERLL
ISPRFHRTHHAVGLGHEKRATAEKPARLGGCNYGVIFPWWDMLFGTADFTDVYHPTGIRDQMPPPAGRARSYGDGFLSQQ
WLGIKRLLRLG

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38069; Mature: 38069

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWDALTNWLNLWVGQIEATVFQNVVLPVVYNLGFGGYAEDAFTGTEWLLVGLVQIAVMVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ILGPLERLRPVEVVTDRAAIRTDILYTLIHRLGLFRLAMFFLLAPLMDGIEGHLRLLGWQ
HHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEEE
RVNVEDWWPGVTSIPLISFSLYLALFDLLDYWYHRLSHTYRWWWSLHAVHHSQRQMTLWS
ECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEC
DNRNHLLDDILRDFVFAAVALAVGVEPSQYVLLVALSQLLQSLQHANLRLHFGWLGERLL
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEE
ISPRFHRTHHAVGLGHEKRATAEKPARLGGCNYGVIFPWWDMLFGTADFTDVYHPTGIRD
ECCCHHHHHHHHCCCCHHHCCHHCCHHHCCCCCCEEHHHHHHHHCCCCHHHCCCCCCCCC
QMPPPAGRARSYGDGFLSQQWLGIKRLLRLG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MWDALTNWLNLWVGQIEATVFQNVVLPVVYNLGFGGYAEDAFTGTEWLLVGLVQIAVMVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ILGPLERLRPVEVVTDRAAIRTDILYTLIHRLGLFRLAMFFLLAPLMDGIEGHLRLLGWQ
HHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHEEEE
RVNVEDWWPGVTSIPLISFSLYLALFDLLDYWYHRLSHTYRWWWSLHAVHHSQRQMTLWS
ECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEC
DNRNHLLDDILRDFVFAAVALAVGVEPSQYVLLVALSQLLQSLQHANLRLHFGWLGERLL
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEE
ISPRFHRTHHAVGLGHEKRATAEKPARLGGCNYGVIFPWWDMLFGTADFTDVYHPTGIRD
ECCCHHHHHHHHCCCCHHHCCHHCCHHHCCCCCCEEHHHHHHHHCCCCHHHCCCCCCCCC
QMPPPAGRARSYGDGFLSQQWLGIKRLLRLG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA