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The map label for this gene is dnaJ [H]

Identifier: 94310761

GI number: 94310761

Start: 1979559

End: 1980596

Strand: Direct

Name: dnaJ [H]

Synonym: Rmet_1823

Alternate gene names: 94310761

Gene position: 1979559-1980596 (Clockwise)

Preceding gene: 94310758

Following gene: 94310768

Centisome position: 50.39

GC content: 67.53

Gene sequence:

>1038_bases
ATGCATACCCATTACGACAACCTCAAGGTCTCCCGCGATGCGCCCGCAGAAGTCATTCGGGCCGCATATAAATCGCTTAG
CCAAAAGTACCACCCGGACAGGCACGCCGATAGCGAACAGGCCAATCGCATCATGCGGCTGCTGAACGCCGCGTACGACG
TGCTGAGCGACCCGGCCAAGCGCGCCGAGCACGACCAGTGGATCGCATCGCAGGAAAAGCTGGACGCCGAACGCAGGCAG
CGCCAGGCCCAACAGGCGGCAGCATCCCGCACCGCTGCGCAGCCTCCACGGCCACAGGGGCGCCCCGCGCGTCCGGCACA
GTCGGCGCAGGCATCGGCACGGGCCACCGGAGCCGCCGCACCCGGCCAATCCGCTGCCGACTCCGCCCAGAAGAAGAAGC
GACGCAAACCCCGACAGGACGGCCAGCGCCCGGGCGAGCCGCTGGCCAGGAAATGGTCGCTCCTGCTCTATGCGGGCATC
GGGGCCGCCATTGTCGTGCTGCTGGGAGACTGGGCCACGCCAACTCAGCCGGCCGTCGACAAGCCAGGCGCGGCGCTCGT
CCAGCCGGCCGCGGCGGCGTCAATCGTCACCCCCGTCCCGGCTGACCTGCCGCGCGAGGCCCAATATTTGCGTCCGAGCC
TGACTCCGCGCGGCCTGCCCTGGCCAACCAATTCGGGCTACCTGCCCGGCTATCCGGTGCTGAATACAAGCGGCCTGTCG
ACGCTGACCGTCGACAACTCACGCGGTCCGTCCGACGTGCTGCTCAAGCTCGTGGCCGTCAACGGCGGCATCCCGGTGCC
GGTACGGACGACTTTCATCCCTGTCGGGTCTTCGTTCACGATGGACGCGATCACGCAGGGCAGCTATGACGTGCGCTACC
AGAGCCTGGACACCGGGGAGATCTACCGGTCGGAGCGCTTCGTGTTCGAGGAAATGCGGGAGGCAGGCAGCACCAGCGCT
GGGCGCAACGTGCTGACGCTGTATGCGGCCCCCGGAAAGTCGCGGTCGGTCACGATCACCGAGCGCGAATTCCCGTAA

Upstream 100 bases:

>100_bases
AGCCCGCATACCCGCCCGCCAATTTGCGTGAATACTTGAGAATCGCGGCGCCCTGCCGTTATTTGTCGTCGAACACCGAT
ATTGCGTCCTTCTTCGCCTG

Downstream 100 bases:

>100_bases
TGCAAACGCCGCCCGGATGGGCGGCGTCTGGAAACGACTGCGTACCTGACAGCCTGACTACTTCGCCTGACCAGCAGGCG
GCGTCCAGGGCTTCGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MHTHYDNLKVSRDAPAEVIRAAYKSLSQKYHPDRHADSEQANRIMRLLNAAYDVLSDPAKRAEHDQWIASQEKLDAERRQ
RQAQQAAASRTAAQPPRPQGRPARPAQSAQASARATGAAAPGQSAADSAQKKKRRKPRQDGQRPGEPLARKWSLLLYAGI
GAAIVVLLGDWATPTQPAVDKPGAALVQPAAAASIVTPVPADLPREAQYLRPSLTPRGLPWPTNSGYLPGYPVLNTSGLS
TLTVDNSRGPSDVLLKLVAVNGGIPVPVRTTFIPVGSSFTMDAITQGSYDVRYQSLDTGEIYRSERFVFEEMREAGSTSA
GRNVLTLYAAPGKSRSVTITEREFP

Sequences:

>Translated_345_residues
MHTHYDNLKVSRDAPAEVIRAAYKSLSQKYHPDRHADSEQANRIMRLLNAAYDVLSDPAKRAEHDQWIASQEKLDAERRQ
RQAQQAAASRTAAQPPRPQGRPARPAQSAQASARATGAAAPGQSAADSAQKKKRRKPRQDGQRPGEPLARKWSLLLYAGI
GAAIVVLLGDWATPTQPAVDKPGAALVQPAAAASIVTPVPADLPREAQYLRPSLTPRGLPWPTNSGYLPGYPVLNTSGLS
TLTVDNSRGPSDVLLKLVAVNGGIPVPVRTTFIPVGSSFTMDAITQGSYDVRYQSLDTGEIYRSERFVFEEMREAGSTSA
GRNVLTLYAAPGKSRSVTITEREFP
>Mature_345_residues
MHTHYDNLKVSRDAPAEVIRAAYKSLSQKYHPDRHADSEQANRIMRLLNAAYDVLSDPAKRAEHDQWIASQEKLDAERRQ
RQAQQAAASRTAAQPPRPQGRPARPAQSAQASARATGAAAPGQSAADSAQKKKRRKPRQDGQRPGEPLARKWSLLLYAGI
GAAIVVLLGDWATPTQPAVDKPGAALVQPAAAASIVTPVPADLPREAQYLRPSLTPRGLPWPTNSGYLPGYPVLNTSGLS
TLTVDNSRGPSDVLLKLVAVNGGIPVPVRTTFIPVGSSFTMDAITQGSYDVRYQSLDTGEIYRSERFVFEEMREAGSTSA
GRNVLTLYAAPGKSRSVTITEREFP

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323870, Length=64, Percent_Identity=45.3125, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 37320; Mature: 37320

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTHYDNLKVSRDAPAEVIRAAYKSLSQKYHPDRHADSEQANRIMRLLNAAYDVLSDPAK
CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
RAEHDQWIASQEKLDAERRQRQAQQAAASRTAAQPPRPQGRPARPAQSAQASARATGAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PGQSAADSAQKKKRRKPRQDGQRPGEPLARKWSLLLYAGIGAAIVVLLGDWATPTQPAVD
CCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPGAALVQPAAAASIVTPVPADLPREAQYLRPSLTPRGLPWPTNSGYLPGYPVLNTSGLS
CCCHHHHCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TLTVDNSRGPSDVLLKLVAVNGGIPVPVRTTFIPVGSSFTMDAITQGSYDVRYQSLDTGE
EEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEEEECCCCHH
IYRSERFVFEEMREAGSTSAGRNVLTLYAAPGKSRSVTITEREFP
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCC
>Mature Secondary Structure
MHTHYDNLKVSRDAPAEVIRAAYKSLSQKYHPDRHADSEQANRIMRLLNAAYDVLSDPAK
CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
RAEHDQWIASQEKLDAERRQRQAQQAAASRTAAQPPRPQGRPARPAQSAQASARATGAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
PGQSAADSAQKKKRRKPRQDGQRPGEPLARKWSLLLYAGIGAAIVVLLGDWATPTQPAVD
CCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
KPGAALVQPAAAASIVTPVPADLPREAQYLRPSLTPRGLPWPTNSGYLPGYPVLNTSGLS
CCCHHHHCCHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
TLTVDNSRGPSDVLLKLVAVNGGIPVPVRTTFIPVGSSFTMDAITQGSYDVRYQSLDTGE
EEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHCCCCCEEEEECCCCHH
IYRSERFVFEEMREAGSTSAGRNVLTLYAAPGKSRSVTITEREFP
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA