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The map label for this gene is gcvT [C]

Identifier: 94310768

GI number: 94310768

Start: 1985734

End: 1986744

Strand: Direct

Name: gcvT [C]

Synonym: Rmet_1830

Alternate gene names: 94310768

Gene position: 1985734-1986744 (Clockwise)

Preceding gene: 94310761

Following gene: 94310769

Centisome position: 50.55

GC content: 68.25

Gene sequence:

>1011_bases
ATGTCCTCCACCGAATTTCCGTCCCTCGACCAAAGCCTGAAATCCCTGCGCGCCGCTGGTATCGTCACCGCGCCGGGCGG
ACTTGGCCTGATCCGCGTGGCTGGCGATGATGCCGCCACTTTCCTGCACAGCCAGCTCACCAACGCCGTTGAAGACCTGA
CCGCGAGCACGGCGCGCCTGGCCGGCTACTGCTCGCCCAAGGGCCGGCTGATGGCCAGCTTCCTGATGTGGCGCGACGCC
GATGGCATCGTGCTGCAACTCTCCGCCGACATCCAGCCGCCAATCCAGAAGCGCCTGACCATGTTCGTGCTGCGGGCCAA
GGCGAAGCTGTCGGACCTGTCCGCCACGCACCGCATCCTCGGCATCGCCGGGGCTGGCGCGGAAGCCGCGCTACAACAGG
CCGGCCTGCCCACTCCCCAGGCACCGCTGGCCACTGCATCCGACGACAACGTGACCGTGATTCGGCTGGCCGATGCCGAC
GGCGAGCCGCGCTGGCAGATCGTCGCACCGGCCGCGCGCATCGAAGCCCTGCAGCAATCGCTCGGTGCTACGCTGGCCGT
CGCCTCGCCCGCTTTCTGGGACTGGCTCGATGTCGCCTCGGGCATCCCCCGCATCGCCGCGGCCACGCAGGAGCAGTTCG
TGCCGCAGATGATCAACTTCGAACTGATTGGCGGCGTGAACTTCCGCAAGGGCTGCTATCCGGGCCAGGAAGTCGTCGCT
CGTAGCCAGTATCGTGGCACGCTCAAGCGCCGCATGTGGCGCGTGCGTGGCACGGGCGATGTCCCGGCGGCGGCGGCGGA
GATTTTCCGTCCCGAGGATCCGGAGCAGCCGTGCGGTATGCTGGTCAACGCCGCGCCGGCGCCCCAGGGCGGTTGGGAAG
GACTGGCCGAATTGAAGATCGACGCCGCCAATGGTGCGCTGCATCTAGGTGCCGCAAGCGGACCGGCCGTGTCCACGGGT
GCGCTGCCGTACGAAGTGCCACTGCCAAACGAGGCGGAAGCGGCCGGGTGA

Upstream 100 bases:

>100_bases
ATAATACCGGGAGCCTTGTGGCCGATGTGTCACCGCAAGTTACGAGAACGCGCCGCGCACGGCGCCGCCCCTAATTCATA
CGCCATCCAGGACCGTCTGC

Downstream 100 bases:

>100_bases
CCGCCACGGGAGCATCGTCATGAGCGATCATCTCTACGTCTACTTCAAGGTGCCGGACGACCGGGCCGCAGAGGCTCTGC
CGCACTGGCATCGCTGGATG

Product: putative glycine cleavage T protein (aminomethyl transferase)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MSSTEFPSLDQSLKSLRAAGIVTAPGGLGLIRVAGDDAATFLHSQLTNAVEDLTASTARLAGYCSPKGRLMASFLMWRDA
DGIVLQLSADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEAALQQAGLPTPQAPLATASDDNVTVIRLADAD
GEPRWQIVAPAARIEALQQSLGATLAVASPAFWDWLDVASGIPRIAAATQEQFVPQMINFELIGGVNFRKGCYPGQEVVA
RSQYRGTLKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGALHLGAASGPAVSTG
ALPYEVPLPNEAEAAG

Sequences:

>Translated_336_residues
MSSTEFPSLDQSLKSLRAAGIVTAPGGLGLIRVAGDDAATFLHSQLTNAVEDLTASTARLAGYCSPKGRLMASFLMWRDA
DGIVLQLSADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEAALQQAGLPTPQAPLATASDDNVTVIRLADAD
GEPRWQIVAPAARIEALQQSLGATLAVASPAFWDWLDVASGIPRIAAATQEQFVPQMINFELIGGVNFRKGCYPGQEVVA
RSQYRGTLKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGALHLGAASGPAVSTG
ALPYEVPLPNEAEAAG
>Mature_335_residues
SSTEFPSLDQSLKSLRAAGIVTAPGGLGLIRVAGDDAATFLHSQLTNAVEDLTASTARLAGYCSPKGRLMASFLMWRDAD
GIVLQLSADIQPPIQKRLTMFVLRAKAKLSDLSATHRILGIAGAGAEAALQQAGLPTPQAPLATASDDNVTVIRLADADG
EPRWQIVAPAARIEALQQSLGATLAVASPAFWDWLDVASGIPRIAAATQEQFVPQMINFELIGGVNFRKGCYPGQEVVAR
SQYRGTLKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKIDAANGALHLGAASGPAVSTGA
LPYEVPLPNEAEAAG

Specific function: Folate-binding protein involved in regulating the level of ATP-dnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication [H]

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tRNA-modifying ygfZ family [H]

Homologues:

Organism=Escherichia coli, GI1789265, Length=229, Percent_Identity=28.3842794759825, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017703
- InterPro:   IPR006222 [H]

Pfam domain/function: PF01571 GCV_T [H]

EC number: NA

Molecular weight: Translated: 35177; Mature: 35046

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTEFPSLDQSLKSLRAAGIVTAPGGLGLIRVAGDDAATFLHSQLTNAVEDLTASTARL
CCCCCCCCHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AGYCSPKGRLMASFLMWRDADGIVLQLSADIQPPIQKRLTMFVLRAKAKLSDLSATHRIL
HCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
GIAGAGAEAALQQAGLPTPQAPLATASDDNVTVIRLADADGEPRWQIVAPAARIEALQQS
EEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCHHHHHHHHHH
LGATLAVASPAFWDWLDVASGIPRIAAATQEQFVPQMINFELIGGVNFRKGCYPGQEVVA
HCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHH
RSQYRGTLKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKI
HHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEE
DAANGALHLGAASGPAVSTGALPYEVPLPNEAEAAG
ECCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SSTEFPSLDQSLKSLRAAGIVTAPGGLGLIRVAGDDAATFLHSQLTNAVEDLTASTARL
CCCCCCCHHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
AGYCSPKGRLMASFLMWRDADGIVLQLSADIQPPIQKRLTMFVLRAKAKLSDLSATHRIL
HCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEE
GIAGAGAEAALQQAGLPTPQAPLATASDDNVTVIRLADADGEPRWQIVAPAARIEALQQS
EEECCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCHHHHHHHHHH
LGATLAVASPAFWDWLDVASGIPRIAAATQEQFVPQMINFELIGGVNFRKGCYPGQEVVA
HCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCHHHHH
RSQYRGTLKRRMWRVRGTGDVPAAAAEIFRPEDPEQPCGMLVNAAPAPQGGWEGLAELKI
HHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEE
DAANGALHLGAASGPAVSTGALPYEVPLPNEAEAAG
ECCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA