| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is bug
Identifier: 94310707
GI number: 94310707
Start: 1920924
End: 1921916
Strand: Reverse
Name: bug
Synonym: Rmet_1769
Alternate gene names: NA
Gene position: 1921916-1920924 (Counterclockwise)
Preceding gene: 94310708
Following gene: 94310705
Centisome position: 48.93
GC content: 65.56
Gene sequence:
>993_bases ATGACCGTCAAGTTTCATTCCGGCCGCCTGACTTGGCTGCTTGGCACCGCGTTCAGCGGCCTCATGATCGTTGCCGCGCC AGCATCCGCCGCGGACGATGCGCCGATGCACATCATCGTTGGCTACGCGCCGGGCGGTGCCGCCGACAGTCTGGCCCGGA TCTACGCCGAGCAACTCCGTCAGGACGGGCAGGGCACGGTGATCGTGGAGAACCGCCCGGGCGCATCTGCACGGCTGGCG CTCGACTACGTCAAGCGGTCGAAGCCCGATGGCAAGACGATCTTCATCGGCCCGTCGCCACTGTTCACGATCTTCCCGCT CACGTACAAGAAGCTCAGCTACGACGCCGACAAGGACCTCGTGCCCGTGGCGGTGCTAACTGACGTGCCGACCGCCGTGG CAGCAGGCGTGCAGCAGCCGTACAAGAACATGAAGGAATTCCTGGACTGGGCCAAGCAGCATCCGTCCAAGGCCAGTCTG GGCCTGGCCACGATCGGCAGTGCGGGCCACCTTGGCACGGTGGCGCTGGGCAAGGCATCGGGCGTGGCCATCACGCCCAC GCCATACCGTGGCGCATCGCCGATGCTGGTGGACGTGATCAGCGGCAACGTGTCGATCGGCTGGGATGCGGTGGCCAGCA TGATGTCGCTGTACAAGGGCGGCAAGATTCAGCTTCTGGGCGTGAGCGGCACACGACGTGCCAAGGCGTTGCCGGAAGTG CCGACGATGAAGGAGCAGGGCATCAACCAGTACGAATTCGCGACGAGCTGGTACGGCGCCTTCGTGCCCGCTGGCACGCC CGCCGCAGAGCAGGCCAAGCTCGAAAAGGCGTTCCTCCAGGCATCGACCAATGCGTCGAGCGCGGCCAAGCTGGAGACGC TGGGGCTTGAGGTGAACGCCCAATCCGGCGAGGCCGCGCGCAAGCGCATCCAGACAGAACGCGCGGCATGGAAGCCGATC GTCGAGTCGACCGGGTTCGTGGCAGAGGACTGA
Upstream 100 bases:
>100_bases CCGATGCCGATACCGATCTCAATATCGAGATCGACGCCGACATCACCACCCTTTGCTTGCCCCTTCCCAGGCTTCCCGCT TTCACCACAGGACTTTCCTC
Downstream 100 bases:
>100_bases TGCCAGCCACTGCTTGGGGGCGATGAACGCTAGGGCGTTTCATCGCCTGCTTGTGTCCCGCGCATGACGGCCACGAACAG ATCCGCGCAACCATGCGCTG
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MTVKFHSGRLTWLLGTAFSGLMIVAAPASAADDAPMHIIVGYAPGGAADSLARIYAEQLRQDGQGTVIVENRPGASARLA LDYVKRSKPDGKTIFIGPSPLFTIFPLTYKKLSYDADKDLVPVAVLTDVPTAVAAGVQQPYKNMKEFLDWAKQHPSKASL GLATIGSAGHLGTVALGKASGVAITPTPYRGASPMLVDVISGNVSIGWDAVASMMSLYKGGKIQLLGVSGTRRAKALPEV PTMKEQGINQYEFATSWYGAFVPAGTPAAEQAKLEKAFLQASTNASSAAKLETLGLEVNAQSGEAARKRIQTERAAWKPI VESTGFVAED
Sequences:
>Translated_330_residues MTVKFHSGRLTWLLGTAFSGLMIVAAPASAADDAPMHIIVGYAPGGAADSLARIYAEQLRQDGQGTVIVENRPGASARLA LDYVKRSKPDGKTIFIGPSPLFTIFPLTYKKLSYDADKDLVPVAVLTDVPTAVAAGVQQPYKNMKEFLDWAKQHPSKASL GLATIGSAGHLGTVALGKASGVAITPTPYRGASPMLVDVISGNVSIGWDAVASMMSLYKGGKIQLLGVSGTRRAKALPEV PTMKEQGINQYEFATSWYGAFVPAGTPAAEQAKLEKAFLQASTNASSAAKLETLGLEVNAQSGEAARKRIQTERAAWKPI VESTGFVAED >Mature_329_residues TVKFHSGRLTWLLGTAFSGLMIVAAPASAADDAPMHIIVGYAPGGAADSLARIYAEQLRQDGQGTVIVENRPGASARLAL DYVKRSKPDGKTIFIGPSPLFTIFPLTYKKLSYDADKDLVPVAVLTDVPTAVAAGVQQPYKNMKEFLDWAKQHPSKASLG LATIGSAGHLGTVALGKASGVAITPTPYRGASPMLVDVISGNVSIGWDAVASMMSLYKGGKIQLLGVSGTRRAKALPEVP TMKEQGINQYEFATSWYGAFVPAGTPAAEQAKLEKAFLQASTNASSAAKLETLGLEVNAQSGEAARKRIQTERAAWKPIV ESTGFVAED
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34751; Mature: 34620
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKFHSGRLTWLLGTAFSGLMIVAAPASAADDAPMHIIVGYAPGGAADSLARIYAEQLR CEEEEECCCEEEEEEHHCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH QDGQGTVIVENRPGASARLALDYVKRSKPDGKTIFIGPSPLFTIFPLTYKKLSYDADKDL HCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEECHHHHHHCCCCCCCC VPVAVLTDVPTAVAAGVQQPYKNMKEFLDWAKQHPSKASLGLATIGSAGHLGTVALGKAS EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEECCCC GVAITPTPYRGASPMLVDVISGNVSIGWDAVASMMSLYKGGKIQLLGVSGTRRAKALPEV CEEECCCCCCCCCCEEEEEECCCCEECHHHHHHHHHHHCCCEEEEEECCCCCHHCCCCCC PTMKEQGINQYEFATSWYGAFVPAGTPAAEQAKLEKAFLQASTNASSAAKLETLGLEVNA CCHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEEEC QSGEAARKRIQTERAAWKPIVESTGFVAED CCCHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TVKFHSGRLTWLLGTAFSGLMIVAAPASAADDAPMHIIVGYAPGGAADSLARIYAEQLR EEEEECCCEEEEEEHHCCCEEEEEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH QDGQGTVIVENRPGASARLALDYVKRSKPDGKTIFIGPSPLFTIFPLTYKKLSYDADKDL HCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCCEEEECHHHHHHCCCCCCCC VPVAVLTDVPTAVAAGVQQPYKNMKEFLDWAKQHPSKASLGLATIGSAGHLGTVALGKAS EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEECCCC GVAITPTPYRGASPMLVDVISGNVSIGWDAVASMMSLYKGGKIQLLGVSGTRRAKALPEV CEEECCCCCCCCCCEEEEEECCCCEECHHHHHHHHHHHCCCEEEEEECCCCCHHCCCCCC PTMKEQGINQYEFATSWYGAFVPAGTPAAEQAKLEKAFLQASTNASSAAKLETLGLEVNA CCHHHCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEEEC QSGEAARKRIQTERAAWKPIVESTGFVAED CCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]