Click here to switch to the map view.

The map label for this gene is omp32 [H]

Identifier: 94310570

GI number: 94310570

Start: 1756658

End: 1757722

Strand: Direct

Name: omp32 [H]

Synonym: Rmet_1628

Alternate gene names: 94310570

Gene position: 1756658-1757722 (Clockwise)

Preceding gene: 94310567

Following gene: 94310572

Centisome position: 44.72

GC content: 63.29

Gene sequence:

>1065_bases
ATGAAACGGAAGGCATTGGCCCTGGCTACGTTGGGTTGCGTGGCATCGGGTGGCGCAGCAGCTCAGTCGAGCGTGACCCT
GTACGGTCTGGTCGATTCGGGTATCGAGTACGTGAGCCACGCAGGGCCAACCGGCAGCTCGGTGGTCAAGATGACGTCGG
GCGGCAAGAACACGTCGCGTTGGGGTCTGCGCGGCACTGAAGACCTTGGCGGCGGGCTGAAGGCAATCTTCACGCTGGAA
TCCGGCATTGCCCTCGACACCGGCAAGCTCGACACGGACAACACGCTGTTCGATCGTCGCGCCTGGGTGGGCCTGCAGGA
CAAGACGCTGGGCAGCATCCGCATGGGCCGTGACTTCACCACGACCTATGACTTCATGCTCCCGTTCGACCCGATGGGTT
ACGCGCCGAACTATTCGTGGGCCACGTCGGCCACCGCCACGGGCGGCCGCAAGGACGGCATGTTCTCCCGCTCCACCAAC
GTGCTGCGCTATGACGGCAAGTTCGGTCCGGTCAAGGTGGGCGGCACGATGGCGATGGGCGAAGTGCCTGGCAGCTTCAA
GAGCTCGTCCAAGTACGACCTGGGCGTGGGCTATGAAGCCGGCAAGTTTGCCGCGGCCCTGACCTGGGATCGCCAGAACG
GCGCGGGCACCAGCACCACGCCGGCTGACAGCGTCGACTACATCCAGGGCATCCACGCTGGCGCCAGCTACGACTTCGGT
TCGCTGTCCGTCTACGCGGGCTACCGGAACTACCGCAAGACGTTCACGACGTCGGCCGCCAAGCAACTCAGCGACATGTA
CTGGCTGGGCGCCGCGTACGACTTCACGCCGGCCTTCACGCTGTACGGCGCGATCTACAAGCAGAACATCAAGGGCGACA
CCGACGCAGATCCGATCCTGTTCTCGCTGCGTGCCCAGTACAATCTTTCCAAACGCACCATGGCCTATCTGTCCGCCGGC
TATGCCAAGGCGCGCAATGGTCAGAACGTGAGTGTCTCGCGTGACAATATTGGCTATGCCAATAACCAGGTCGGCGTGAC
GGCGGGTCTGCAGCACCGCTTCTGA

Upstream 100 bases:

>100_bases
ACCCACGCCGCAGATACCCACGAATCGAAAGCGAACTGAAAGTGAGGCCCAAATACCATCCGTGCCGTTCCACAACTACA
AGCAGACAAAGGAGACTTGT

Downstream 100 bases:

>100_bases
TCTCGCTTTCTGATCGTTGTTTTCGACCGTCGTGGTGGACGGTCGCCCGGCGGTGCGAGGGGCTCGCGCCGCCGGTTTTT
GCGTTTTTTTTTGCGTTTAC

Product: putative transmembrane outer membrane porin signal peptide protein

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MKRKALALATLGCVASGGAAAQSSVTLYGLVDSGIEYVSHAGPTGSSVVKMTSGGKNTSRWGLRGTEDLGGGLKAIFTLE
SGIALDTGKLDTDNTLFDRRAWVGLQDKTLGSIRMGRDFTTTYDFMLPFDPMGYAPNYSWATSATATGGRKDGMFSRSTN
VLRYDGKFGPVKVGGTMAMGEVPGSFKSSSKYDLGVGYEAGKFAAALTWDRQNGAGTSTTPADSVDYIQGIHAGASYDFG
SLSVYAGYRNYRKTFTTSAAKQLSDMYWLGAAYDFTPAFTLYGAIYKQNIKGDTDADPILFSLRAQYNLSKRTMAYLSAG
YAKARNGQNVSVSRDNIGYANNQVGVTAGLQHRF

Sequences:

>Translated_354_residues
MKRKALALATLGCVASGGAAAQSSVTLYGLVDSGIEYVSHAGPTGSSVVKMTSGGKNTSRWGLRGTEDLGGGLKAIFTLE
SGIALDTGKLDTDNTLFDRRAWVGLQDKTLGSIRMGRDFTTTYDFMLPFDPMGYAPNYSWATSATATGGRKDGMFSRSTN
VLRYDGKFGPVKVGGTMAMGEVPGSFKSSSKYDLGVGYEAGKFAAALTWDRQNGAGTSTTPADSVDYIQGIHAGASYDFG
SLSVYAGYRNYRKTFTTSAAKQLSDMYWLGAAYDFTPAFTLYGAIYKQNIKGDTDADPILFSLRAQYNLSKRTMAYLSAG
YAKARNGQNVSVSRDNIGYANNQVGVTAGLQHRF
>Mature_354_residues
MKRKALALATLGCVASGGAAAQSSVTLYGLVDSGIEYVSHAGPTGSSVVKMTSGGKNTSRWGLRGTEDLGGGLKAIFTLE
SGIALDTGKLDTDNTLFDRRAWVGLQDKTLGSIRMGRDFTTTYDFMLPFDPMGYAPNYSWATSATATGGRKDGMFSRSTN
VLRYDGKFGPVKVGGTMAMGEVPGSFKSSSKYDLGVGYEAGKFAAALTWDRQNGAGTSTTPADSVDYIQGIHAGASYDFG
SLSVYAGYRNYRKTFTTSAAKQLSDMYWLGAAYDFTPAFTLYGAIYKQNIKGDTDADPILFSLRAQYNLSKRTMAYLSAG
YAKARNGQNVSVSRDNIGYANNQVGVTAGLQHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 37790; Mature: 37790

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKALALATLGCVASGGAAAQSSVTLYGLVDSGIEYVSHAGPTGSSVVKMTSGGKNTSR
CCCHHEEHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
WGLRGTEDLGGGLKAIFTLESGIALDTGKLDTDNTLFDRRAWVGLQDKTLGSIRMGRDFT
CCCCCCHHHCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCC
TTYDFMLPFDPMGYAPNYSWATSATATGGRKDGMFSRSTNVLRYDGKFGPVKVGGTMAMG
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCEEEEC
EVPGSFKSSSKYDLGVGYEAGKFAAALTWDRQNGAGTSTTPADSVDYIQGIHAGASYDFG
CCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
SLSVYAGYRNYRKTFTTSAAKQLSDMYWLGAAYDFTPAFTLYGAIYKQNIKGDTDADPIL
CEEEEECHHHHHHHHHHHHHHHHHHHEEECEECCCCHHHHHHHHHHHCCCCCCCCCCCEE
FSLRAQYNLSKRTMAYLSAGYAKARNGQNVSVSRDNIGYANNQVGVTAGLQHRF
EEEECCCCCCHHHHHHHHHCHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKRKALALATLGCVASGGAAAQSSVTLYGLVDSGIEYVSHAGPTGSSVVKMTSGGKNTSR
CCCHHEEHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
WGLRGTEDLGGGLKAIFTLESGIALDTGKLDTDNTLFDRRAWVGLQDKTLGSIRMGRDFT
CCCCCCHHHCCCEEEEEEECCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCC
TTYDFMLPFDPMGYAPNYSWATSATATGGRKDGMFSRSTNVLRYDGKFGPVKVGGTMAMG
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCEEEEC
EVPGSFKSSSKYDLGVGYEAGKFAAALTWDRQNGAGTSTTPADSVDYIQGIHAGASYDFG
CCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
SLSVYAGYRNYRKTFTTSAAKQLSDMYWLGAAYDFTPAFTLYGAIYKQNIKGDTDADPIL
CEEEEECHHHHHHHHHHHHHHHHHHHEEECEECCCCHHHHHHHHHHHCCCCCCCCCCCEE
FSLRAQYNLSKRTMAYLSAGYAKARNGQNVSVSRDNIGYANNQVGVTAGLQHRF
EEEECCCCCCHHHHHHHHHCHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]