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The map label for this gene is slyA [C]

Identifier: 94310567

GI number: 94310567

Start: 1753926

End: 1754396

Strand: Direct

Name: slyA [C]

Synonym: Rmet_1625

Alternate gene names: 94310567

Gene position: 1753926-1754396 (Clockwise)

Preceding gene: 94310565

Following gene: 94310570

Centisome position: 44.65

GC content: 64.33

Gene sequence:

>471_bases
ATGGAAACAAATCTTGAAAGGCGCTTCGGCTTTCTCGTGGCGGACGTTGGCCGGCTGACCGGCAGGCGATTTGACGAGTT
GTCCCGCGCGACGCTAGACCTGACGCGTGCGCAGTACCGTGCGCTTGCGTGTCTGACGCACTATGGGGAAATCAATCAGG
CCTGCCTGGCGGACCTGATGGAAGTGGCGCCGATTTCAGCCGGGCGGCTGCTGGACCGGATGGAGGAGGGTGGCTGGATC
GTGCGTCGGCCCAATCCGGCGGATCGCCGCGAGCGCATGGTCAGCGTGACGGAAAAAGCGGAGCAGGCACTGCATGCCGC
GCGCGAGGTGGGGGATGTGGTGACATCGGAGGCGCTCAACGGCTTCAACGCCGAAGAAGCGGAGCAATTCATCGGCTTTC
TGCAGCGCGCCCGGGGGAATCTGTCGAAGCCGGCCCTGGCCCAGACGCAAGCGCAGGCGCAGGGAAAGTAA

Upstream 100 bases:

>100_bases
CGTGCTTATTATAATCATGGACTGGCGTTTTTGGGCGATCACGCGAGTTACGGACGGCCAGAAAAGCGGATCGAGCGCCC
CGACTCCCTATAATCGCGCG

Downstream 100 bases:

>100_bases
CCACCACGGTCAGGCCGCCGCCCGGCGTGCTTTCCAGCGCGACGGCGGCGCCATGAATGCGGGCGATCTCCCGCACGATC
GACAGCCCCAGGCCGCTGCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Transcriptional Regulatory Protein; Transcriptional Regulator Protein

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
METNLERRFGFLVADVGRLTGRRFDELSRATLDLTRAQYRALACLTHYGEINQACLADLMEVAPISAGRLLDRMEEGGWI
VRRPNPADRRERMVSVTEKAEQALHAAREVGDVVTSEALNGFNAEEAEQFIGFLQRARGNLSKPALAQTQAQAQGK

Sequences:

>Translated_156_residues
METNLERRFGFLVADVGRLTGRRFDELSRATLDLTRAQYRALACLTHYGEINQACLADLMEVAPISAGRLLDRMEEGGWI
VRRPNPADRRERMVSVTEKAEQALHAAREVGDVVTSEALNGFNAEEAEQFIGFLQRARGNLSKPALAQTQAQAQGK
>Mature_156_residues
METNLERRFGFLVADVGRLTGRRFDELSRATLDLTRAQYRALACLTHYGEINQACLADLMEVAPISAGRLLDRMEEGGWI
VRRPNPADRRERMVSVTEKAEQALHAAREVGDVVTSEALNGFNAEEAEQFIGFLQRARGNLSKPALAQTQAQAQGK

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17345; Mature: 17345

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNLERRFGFLVADVGRLTGRRFDELSRATLDLTRAQYRALACLTHYGEINQACLADLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EVAPISAGRLLDRMEEGGWIVRRPNPADRRERMVSVTEKAEQALHAAREVGDVVTSEALN
HHCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFNAEEAEQFIGFLQRARGNLSKPALAQTQAQAQGK
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
METNLERRFGFLVADVGRLTGRRFDELSRATLDLTRAQYRALACLTHYGEINQACLADLM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EVAPISAGRLLDRMEEGGWIVRRPNPADRRERMVSVTEKAEQALHAAREVGDVVTSEALN
HHCCCCHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GFNAEEAEQFIGFLQRARGNLSKPALAQTQAQAQGK
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA