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The map label for this gene is dsbB

Identifier: 94310345

GI number: 94310345

Start: 1514288

End: 1514773

Strand: Direct

Name: dsbB

Synonym: Rmet_1403

Alternate gene names: 94310345

Gene position: 1514288-1514773 (Clockwise)

Preceding gene: 94310343

Following gene: 94310347

Centisome position: 38.55

GC content: 62.35

Gene sequence:

>486_bases
ATGCAAGCCAATTCCCGAACCTATTTCCTACTGATCGCCATCGTTTCCTTTGCGATGGTCGGTGCCGCGCTGTATATGCA
GTACGCGGAGAACCTGCAACCGTGCCCGCTCTGCATCATGCAGCGCTTCGCGTTCATCGGTATCGGTATCTTTTCGTTGC
TGGCGGTCATCGCGCAGAACACGCGCACGCTCTGGCAGGGCCTGGGGATGCTTTCCGGCGTGGGCGGCATTGCCGTGGCG
GGCTACCAGGTGGCGTTGCTGATGAACCCGAAGGCGTCCTGCGGCATCGACCCGCTGGAGAACTGGGTCAACTCGCTGCC
CACGGCCAAGCTGCTGCCGCAGGTGTTCTATTCGGATGGTCTGTGCACGGCACCCACGCCGCCCATCCTGGGCCTTTCGA
TCCCGGCGTGGTCGCTGATCTGGCTGCTGATTCTGACGCTGACGCTTGCCGTCGGGCTGATTCGCCGCGAGAAGCACTTC
CGCTGA

Upstream 100 bases:

>100_bases
ATCCGCCACAGTTTCCGGCGAGGCCGGTTGCCGGGGCGCAACGAAGACATCGATGAAAATGGGTAATAATCGCGTCGAAG
AAAATTCGCACCCGATGCCC

Downstream 100 bases:

>100_bases
GCGGCGTGGTTCTTGGCCCTCTTGTCCCTCGTGCCCGAGCTTGTCCCCTCCCGCGTGTGGTAGAGGGGCACAAGCTTCAG
GTCGATTGAGATGCCTCAGG

Product: disulfide bond formation protein B

Products: NA

Alternate protein names: Disulfide oxidoreductase

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MQANSRTYFLLIAIVSFAMVGAALYMQYAENLQPCPLCIMQRFAFIGIGIFSLLAVIAQNTRTLWQGLGMLSGVGGIAVA
GYQVALLMNPKASCGIDPLENWVNSLPTAKLLPQVFYSDGLCTAPTPPILGLSIPAWSLIWLLILTLTLAVGLIRREKHF
R

Sequences:

>Translated_161_residues
MQANSRTYFLLIAIVSFAMVGAALYMQYAENLQPCPLCIMQRFAFIGIGIFSLLAVIAQNTRTLWQGLGMLSGVGGIAVA
GYQVALLMNPKASCGIDPLENWVNSLPTAKLLPQVFYSDGLCTAPTPPILGLSIPAWSLIWLLILTLTLAVGLIRREKHF
R
>Mature_161_residues
MQANSRTYFLLIAIVSFAMVGAALYMQYAENLQPCPLCIMQRFAFIGIGIFSLLAVIAQNTRTLWQGLGMLSGVGGIAVA
GYQVALLMNPKASCGIDPLENWVNSLPTAKLLPQVFYSDGLCTAPTPPILGLSIPAWSLIWLLILTLTLAVGLIRREKHF
R

Specific function: Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbB family

Homologues:

Organism=Escherichia coli, GI1787433, Length=139, Percent_Identity=30.2158273381295, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DSBB_RALME (Q1LNJ0)

Other databases:

- EMBL:   CP000352
- RefSeq:   YP_583555.1
- ProteinModelPortal:   Q1LNJ0
- SMR:   Q1LNJ0
- STRING:   Q1LNJ0
- GeneID:   4038206
- GenomeReviews:   CP000352_GR
- KEGG:   rme:Rmet_1403
- eggNOG:   COG1495
- HOGENOM:   HBG637909
- OMA:   CILQRYA
- ProtClustDB:   PRK02110
- BioCyc:   RMET266264:RMET_1403-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00286
- InterPro:   IPR003752
- InterPro:   IPR022920

Pfam domain/function: PF02600 DsbB

EC number: NA

Molecular weight: Translated: 17527; Mature: 17527

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14edb748)-; HASH(0x1608a598)-; HASH(0x146e5e70)-; HASH(0x15d6db18)-;

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQANSRTYFLLIAIVSFAMVGAALYMQYAENLQPCPLCIMQRFAFIGIGIFSLLAVIAQN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRTLWQGLGMLSGVGGIAVAGYQVALLMNPKASCGIDPLENWVNSLPTAKLLPQVFYSDG
HHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCC
LCTAPTPPILGLSIPAWSLIWLLILTLTLAVGLIRREKHFR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MQANSRTYFLLIAIVSFAMVGAALYMQYAENLQPCPLCIMQRFAFIGIGIFSLLAVIAQN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TRTLWQGLGMLSGVGGIAVAGYQVALLMNPKASCGIDPLENWVNSLPTAKLLPQVFYSDG
HHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCC
LCTAPTPPILGLSIPAWSLIWLLILTLTLAVGLIRREKHFR
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA