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The map label for this gene is hoxV [H]

Identifier: 94310231

GI number: 94310231

Start: 1406230

End: 1407384

Strand: Reverse

Name: hoxV [H]

Synonym: Rmet_1287

Alternate gene names: 94310231

Gene position: 1407384-1406230 (Counterclockwise)

Preceding gene: 94310232

Following gene: 94310230

Centisome position: 35.83

GC content: 71.95

Gene sequence:

>1155_bases
GTGACCGATCTGGCCGGACACCTGCAGCTGCGCCCGGGTGCTTCGGTACCCCACAGCCTGCACAGCACGCGCCGGGCCTG
GGCCGCGCAGCTCGCGCCCGGTCGTTCGGTCGAAACCTGGCCGGCCCTGCTGGCGGGGCTTTTCAGCCTGTGCGGCCATG
CGCACCGTACCGCCAGCCAGCTGGCCATCAGCGCGGCTGCGCCCGGCCTGCTGCCCGTGACCGACGCCGTGCCCGCCATC
CTGCAACGCGAAACTGCGCTGGAACACCTGCGTCGAATCGCGCTGGACTGGCCGCGCCTGCTGGCCGATCCAGCGGCTGC
GCAGGCAGCGGCGGCTCAGGCAGCCGAGAGCCTGCGCCGCTGTCCGCTTATCGCAGCGCCACAGGAGGTTGCGCCCTGGC
CCCGGTTACGCCAGTGGTTGCAGGACGAGTGGCTGAAGATGAACCCGGCCACCTGGCTGCGGGCCTGGCAGGCCTGCGGC
GCCGACTGGCTCGACGACTGGAGCCGGCGCCACAACGGCTGGCTGCCGGCCCTGCTGCAAGCCACTCGCCAGGGCGATAC
GGCCTTGCCACAGGCGCACACCCAGGCCCTGCGTCCGCATGAGGGCGAGGCCGGCCTGCGGGCACTGGCCGAGGCGCTGG
CTGCATCCGATCACTTCGCTCTGCAGCCGCGCTGGCAGGGGTGTACGGCCTGCACCGGCGCCTGGAATCGTCTGCACGAC
GCTGAGCCCGCCCAGCCCTGGACGGCCTGGGCCCTGCTGGGCAGCCGGCTGGCCGAATTGGTGCGCCTGTGCCTGCCCGA
TGCACCGGGTGAAACCGGGGCCGGCAGGCTGGCCTGGGGTGCGCTGGCCACCGGGCCTCGGCAGGGCCTGGCCTGGGTGG
AAATGGCGCGTGGTCTTCTGATCCACCAGGTGGCGCTGGACGAAAAACTGCCTGGCCAGCCATACCGGCTGCGCTCCGCC
CAGGTGCTGGCGCCTACCGAATGGAACTTCCACCCCGAAGGCGTGGCCGCACAGGCGCTGGCCGCCCTGCCGCCAGACAT
GCCCGGGCTTGCGGCCCGGGTGCGCCTGCTGATGGCAGCGCTGGATCCCTGCGTTCCTTTCGAGATCGCGGCGCCTTTGG
TGCACGATGCGCCTCTGGAGGTCAACCATGCATGA

Upstream 100 bases:

>100_bases
AAACCGGTGGCCGAAACCATACCCGCGCGCCGGGCCTTTTTCCTTGCGCGCGGCGCGGGGGTGCGCTCATGAGCGCCGCG
TCAGTCCTGGAGGGCGTGTC

Downstream 100 bases:

>100_bases
AGCGAGTCTGGCTGGCGGTGTGCTGCAGCTGGTGGAAGATACCGCACGGCGGGAAGGCTTTGCACGCCTGCTCGAACTGC
GGCTGGAAGCCGGCCAGCTG

Product: hydrogenase expression/formation protein HoxV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTDLAGHLQLRPGASVPHSLHSTRRAWAAQLAPGRSVETWPALLAGLFSLCGHAHRTASQLAISAAAPGLLPVTDAVPAI
LQRETALEHLRRIALDWPRLLADPAAAQAAAAQAAESLRRCPLIAAPQEVAPWPRLRQWLQDEWLKMNPATWLRAWQACG
ADWLDDWSRRHNGWLPALLQATRQGDTALPQAHTQALRPHEGEAGLRALAEALAASDHFALQPRWQGCTACTGAWNRLHD
AEPAQPWTAWALLGSRLAELVRLCLPDAPGETGAGRLAWGALATGPRQGLAWVEMARGLLIHQVALDEKLPGQPYRLRSA
QVLAPTEWNFHPEGVAAQALAALPPDMPGLAARVRLLMAALDPCVPFEIAAPLVHDAPLEVNHA

Sequences:

>Translated_384_residues
MTDLAGHLQLRPGASVPHSLHSTRRAWAAQLAPGRSVETWPALLAGLFSLCGHAHRTASQLAISAAAPGLLPVTDAVPAI
LQRETALEHLRRIALDWPRLLADPAAAQAAAAQAAESLRRCPLIAAPQEVAPWPRLRQWLQDEWLKMNPATWLRAWQACG
ADWLDDWSRRHNGWLPALLQATRQGDTALPQAHTQALRPHEGEAGLRALAEALAASDHFALQPRWQGCTACTGAWNRLHD
AEPAQPWTAWALLGSRLAELVRLCLPDAPGETGAGRLAWGALATGPRQGLAWVEMARGLLIHQVALDEKLPGQPYRLRSA
QVLAPTEWNFHPEGVAAQALAALPPDMPGLAARVRLLMAALDPCVPFEIAAPLVHDAPLEVNHA
>Mature_383_residues
TDLAGHLQLRPGASVPHSLHSTRRAWAAQLAPGRSVETWPALLAGLFSLCGHAHRTASQLAISAAAPGLLPVTDAVPAIL
QRETALEHLRRIALDWPRLLADPAAAQAAAAQAAESLRRCPLIAAPQEVAPWPRLRQWLQDEWLKMNPATWLRAWQACGA
DWLDDWSRRHNGWLPALLQATRQGDTALPQAHTQALRPHEGEAGLRALAEALAASDHFALQPRWQGCTACTGAWNRLHDA
EPAQPWTAWALLGSRLAELVRLCLPDAPGETGAGRLAWGALATGPRQGLAWVEMARGLLIHQVALDEKLPGQPYRLRSAQ
VLAPTEWNFHPEGVAAQALAALPPDMPGLAARVRLLMAALDPCVPFEIAAPLVHDAPLEVNHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41491; Mature: 41360

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLAGHLQLRPGASVPHSLHSTRRAWAAQLAPGRSVETWPALLAGLFSLCGHAHRTASQ
CCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAISAAAPGLLPVTDAVPAILQRETALEHLRRIALDWPRLLADPAAAQAAAAQAAESLRR
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
CPLIAAPQEVAPWPRLRQWLQDEWLKMNPATWLRAWQACGADWLDDWSRRHNGWLPALLQ
CCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH
ATRQGDTALPQAHTQALRPHEGEAGLRALAEALAASDHFALQPRWQGCTACTGAWNRLHD
HHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCC
AEPAQPWTAWALLGSRLAELVRLCLPDAPGETGAGRLAWGALATGPRQGLAWVEMARGLL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
IHQVALDEKLPGQPYRLRSAQVLAPTEWNFHPEGVAAQALAALPPDMPGLAARVRLLMAA
HHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
LDPCVPFEIAAPLVHDAPLEVNHA
HCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TDLAGHLQLRPGASVPHSLHSTRRAWAAQLAPGRSVETWPALLAGLFSLCGHAHRTASQ
CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAISAAAPGLLPVTDAVPAILQRETALEHLRRIALDWPRLLADPAAAQAAAAQAAESLRR
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
CPLIAAPQEVAPWPRLRQWLQDEWLKMNPATWLRAWQACGADWLDDWSRRHNGWLPALLQ
CCCCCCCHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH
ATRQGDTALPQAHTQALRPHEGEAGLRALAEALAASDHFALQPRWQGCTACTGAWNRLHD
HHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCC
AEPAQPWTAWALLGSRLAELVRLCLPDAPGETGAGRLAWGALATGPRQGLAWVEMARGLL
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
IHQVALDEKLPGQPYRLRSAQVLAPTEWNFHPEGVAAQALAALPPDMPGLAARVRLLMAA
HHHHHHHCCCCCCCEEECCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
LDPCVPFEIAAPLVHDAPLEVNHA
HCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488 [H]