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The map label for this gene is hoxT [H]

Identifier: 94310232

GI number: 94310232

Start: 1407413

End: 1407889

Strand: Reverse

Name: hoxT [H]

Synonym: Rmet_1288

Alternate gene names: 94310232

Gene position: 1407889-1407413 (Counterclockwise)

Preceding gene: 94310233

Following gene: 94310231

Centisome position: 35.84

GC content: 67.3

Gene sequence:

>477_bases
ATGGAACAGCGCGTCGCGGCTTTGGTCAGTTTCTACCGTCAGGTGGAAACCAAACGCATGCAGGGCATTCCCATCCTCAA
CCCGGCGCTGAGCGTGGAGGCGGTGGGCTTCCGGCCCGCCGATGCTGACGAGACGGTGTCGGAGGGGGTTCTCATCACGC
CCTGGTTCATGAGCCTGGTGCGGCTCCCGCTGGCGGTGCAGGACCACGGAGGCAGGGTCGGGCGCAAGCGCGTGATGGCA
TTCGGCAAGGAACGCTTCGACTTCATCGGCGCCCACGACCCGGACATCGGCTTCCATGAAGCATGCGCCCTCTTCTCGCC
GATGGCAGACTTCCGTAGCCAGGATCAGGCGCGCGACACCGCACTGGCGGTGCTCGATCAGCTGCGTCCGCCCCCGCCGG
CCGCCAAACCGGTGGCCGAAACCATACCCGCGCGCCGGGCCTTTTTCCTTGCGCGCGGCGCGGGGGTGCGCTCATGA

Upstream 100 bases:

>100_bases
CAGATCCCGCCCGGCACGCCGTTTGCTGAGCTGCCGCCGCACTGGCGCTGCCCCAACTGCGACTGCGATGCCGAACAGTT
TCTCCTGCTCAATGACTGAG

Downstream 100 bases:

>100_bases
GCGCCGCGTCAGTCCTGGAGGGCGTGTCGTGACCGATCTGGCCGGACACCTGCAGCTGCGCCCGGGTGCTTCGGTACCCC
ACAGCCTGCACAGCACGCGC

Product: putative hydrogenase expression/formation protein HoxT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MEQRVAALVSFYRQVETKRMQGIPILNPALSVEAVGFRPADADETVSEGVLITPWFMSLVRLPLAVQDHGGRVGRKRVMA
FGKERFDFIGAHDPDIGFHEACALFSPMADFRSQDQARDTALAVLDQLRPPPPAAKPVAETIPARRAFFLARGAGVRS

Sequences:

>Translated_158_residues
MEQRVAALVSFYRQVETKRMQGIPILNPALSVEAVGFRPADADETVSEGVLITPWFMSLVRLPLAVQDHGGRVGRKRVMA
FGKERFDFIGAHDPDIGFHEACALFSPMADFRSQDQARDTALAVLDQLRPPPPAAKPVAETIPARRAFFLARGAGVRS
>Mature_158_residues
MEQRVAALVSFYRQVETKRMQGIPILNPALSVEAVGFRPADADETVSEGVLITPWFMSLVRLPLAVQDHGGRVGRKRVMA
FGKERFDFIGAHDPDIGFHEACALFSPMADFRSQDQARDTALAVLDQLRPPPPAAKPVAETIPARRAFFLARGAGVRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004039
- InterPro:   IPR018527 [H]

Pfam domain/function: PF00301 Rubredoxin [H]

EC number: NA

Molecular weight: Translated: 17357; Mature: 17357

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRVAALVSFYRQVETKRMQGIPILNPALSVEAVGFRPADADETVSEGVLITPWFMSLV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHCCEEECHHHHHHH
RLPLAVQDHGGRVGRKRVMAFGKERFDFIGAHDPDIGFHEACALFSPMADFRSQDQARDT
HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALAVLDQLRPPPPAAKPVAETIPARRAFFLARGAGVRS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEQRVAALVSFYRQVETKRMQGIPILNPALSVEAVGFRPADADETVSEGVLITPWFMSLV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHCCEEECHHHHHHH
RLPLAVQDHGGRVGRKRVMAFGKERFDFIGAHDPDIGFHEACALFSPMADFRSQDQARDT
HCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALAVLDQLRPPPPAAKPVAETIPARRAFFLARGAGVRS
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8497190; 2007559 [H]