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The map label for this gene is cyoC [H]

Identifier: 94309895

GI number: 94309895

Start: 1036307

End: 1036951

Strand: Direct

Name: cyoC [H]

Synonym: Rmet_0950

Alternate gene names: 94309895

Gene position: 1036307-1036951 (Clockwise)

Preceding gene: 94309894

Following gene: 94309896

Centisome position: 26.38

GC content: 62.02

Gene sequence:

>645_bases
ATGTCGACAGAAGTTCTTGACCGCTTCGGGGCGAAAGCCCCCGCGCATGCGCACTCGCACGACGAGGCGCACGACCACGC
GCATCACGACACCAGCGAGAACACCGTCTTCGGTTTCTGGCTGTACCTGATGAGCGACTGCATCTTGTTCGCGTGCCTGT
TCGCCGCCTTCGCCGTCCTGCGCGGCGAAGTGGCGGGTGGCCCGTCGGGCAAGGAGATCTTCGAGCTCAACTACGTGCTC
GTGGAAACCGCCATCCTGCTGTTCTCGTCGATCACCTACGGCTTTGCCATGGTGTCGATGCAGAACCATCAGAAGGGCCG
CGTGATGTTCTGGCTGGGCGTGACGTTCCTGCTGGGCGCCGCGTTCATGGGCATGGAAATCAACGAGTTCGCGCACCTGA
TTCACGAGGGTGCCGGCCCGAGCCGCAGCGCGTTCCTGTCGTCGTTCTTCACGCTCGTGGGTACCCACGGTCTGCACGTT
GCCAGCGGCATGCTGTGGATGCTCGTGCTGATGTGGCAACTGTCGAAGAAGGGCCTGACCCCGGTCGTGGCCAAGCGCCT
GAACTGCCTCAGCCTGTTCTGGCACTTCCTGGACGTGGTCTGGATCGGTGTGTTCACCGTGGTCTACCTGATGGGAGCAA
TGTAA

Upstream 100 bases:

>100_bases
GCGCCAACGATGACCACATCGATTACTACGTGCCGGCCTCCGAGGTCGAGCAGATCGAAACGCGCTACCAGCAGCGCATT
GCTGCCCAGGGCTGATAACC

Downstream 100 bases:

>100_bases
ATGGCACAGCAACACGCTTCGACCGCCGCTCACGGCGCGTCGCATGGCCACAGCAGCGTCAAGTCGTATGTGATTGGCTT
CGTGCTGGCGGTGATCCTGA

Product: cytochrome o ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSTEVLDRFGAKAPAHAHSHDEAHDHAHHDTSENTVFGFWLYLMSDCILFACLFAAFAVLRGEVAGGPSGKEIFELNYVL
VETAILLFSSITYGFAMVSMQNHQKGRVMFWLGVTFLLGAAFMGMEINEFAHLIHEGAGPSRSAFLSSFFTLVGTHGLHV
ASGMLWMLVLMWQLSKKGLTPVVAKRLNCLSLFWHFLDVVWIGVFTVVYLMGAM

Sequences:

>Translated_214_residues
MSTEVLDRFGAKAPAHAHSHDEAHDHAHHDTSENTVFGFWLYLMSDCILFACLFAAFAVLRGEVAGGPSGKEIFELNYVL
VETAILLFSSITYGFAMVSMQNHQKGRVMFWLGVTFLLGAAFMGMEINEFAHLIHEGAGPSRSAFLSSFFTLVGTHGLHV
ASGMLWMLVLMWQLSKKGLTPVVAKRLNCLSLFWHFLDVVWIGVFTVVYLMGAM
>Mature_213_residues
STEVLDRFGAKAPAHAHSHDEAHDHAHHDTSENTVFGFWLYLMSDCILFACLFAAFAVLRGEVAGGPSGKEIFELNYVLV
ETAILLFSSITYGFAMVSMQNHQKGRVMFWLGVTFLLGAAFMGMEINEFAHLIHEGAGPSRSAFLSSFFTLVGTHGLHVA
SGMLWMLVLMWQLSKKGLTPVVAKRLNCLSLFWHFLDVVWIGVFTVVYLMGAM

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=198, Percent_Identity=63.6363636363636, Blast_Score=259, Evalue=9e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 23751; Mature: 23620

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEVLDRFGAKAPAHAHSHDEAHDHAHHDTSENTVFGFWLYLMSDCILFACLFAAFAVL
CCHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEVAGGPSGKEIFELNYVLVETAILLFSSITYGFAMVSMQNHQKGRVMFWLGVTFLLGA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AFMGMEINEFAHLIHEGAGPSRSAFLSSFFTLVGTHGLHVASGMLWMLVLMWQLSKKGLT
HHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PVVAKRLNCLSLFWHFLDVVWIGVFTVVYLMGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STEVLDRFGAKAPAHAHSHDEAHDHAHHDTSENTVFGFWLYLMSDCILFACLFAAFAVL
CHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEVAGGPSGKEIFELNYVLVETAILLFSSITYGFAMVSMQNHQKGRVMFWLGVTFLLGA
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
AFMGMEINEFAHLIHEGAGPSRSAFLSSFFTLVGTHGLHVASGMLWMLVLMWQLSKKGLT
HHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
PVVAKRLNCLSLFWHFLDVVWIGVFTVVYLMGAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]