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The map label for this gene is opuBC [H]

Identifier: 94309745

GI number: 94309745

Start: 876345

End: 877295

Strand: Direct

Name: opuBC [H]

Synonym: Rmet_0800

Alternate gene names: 94309745

Gene position: 876345-877295 (Clockwise)

Preceding gene: 94309744

Following gene: 94309746

Centisome position: 22.31

GC content: 64.56

Gene sequence:

>951_bases
ATGAGATCCAACAAGAACCGACACCGTGCGCCGTTCTCCGAGAGCCGGCTCTACTGGCTGGTCGTCGCGCTGGGCGCGGC
GTTCGCCGCGATCCTGCTGACCACCGCCCCGGCACGCGCGCAAAGCGCCAGCGATCCGGTGCGCATCGGTGGCAAGAATT
TCACCGAACAGCTGATCCTGTCGTCGATGACATCGCAGTACCTGCGTGCCCACGGTGTCGACACCACGTTGACCGCGGGG
CTGGGCAGCACGCTGATGCGCCAGGCCATGGAGTCCGGTCAGCTCGATGTCGTGTGGGACTACACGGGCACGGCGTTGAT
CGTCTTCAACAAGGTCGAGGAAAAGCTGGACGGCCCGCAGAGCTACGCGCGTGTGAAGGCGCTCGACGCGGCCAAGGGGC
TGGTCTGGCTCGATCCGTCGGCCATCAACAATACGTACGCGCTGGCGATGCCGAAGGAGCGCGCCGGCACCGCCACCACG
CTATCCGCGTATGCCGAGAAAATGCGTGCCGATGGCGAGGACAAGCGGCACCCGCTGGCGGTGGATATGGAATTCGCCGC
GCGCCCTGACGGACTCGAGCCACTGAAGGCCGCCTACGGCTTGCCATTCACGCGCAAGGACGTCATCCAGCTCGATCCGG
GCCTGGTCTATACGGCGCTGAAGAATAACCAGGTGGACCTGGGCCTGGTCTATACGACCGACGGCCGAGTGAAGGGCTTC
GATCTGGTCCTGCTCGAGGACGATCTGAATTTCTTCCCGCCGTACAACGCGGTGCCCGTGGTGCGCAAGGCCGCGCTCGA
CGCGCATCCCGAACTTGCCGACCTGCTCAACGCGCTCGCCGCCAAGCTCGACAACGCGGCGATGACCGATATGAACTATC
AGGTCGACATCGACCAGCAGCCGGTGGACAAGGTGGCGGGAGACTTCCTGCGCAGCCATGGCCTGATCTGA

Upstream 100 bases:

>100_bases
GGCGCCACCGCGCTGCTGGCCCTCACGCTGGACGCGCTGTTCGCCACCGCTGGCCATGTCTACCTGCGCCGCCGCGGGCT
GGCACGCTGAGGAATCATCC

Downstream 100 bases:

>100_bases
GGAGCCCATCATGGATCTGCTGACCTACCTTCACCATAGCTGGCCGACGCTGCTACGGCTGACTGGCGAGCACCTCGCGC
TGGTCGGCTCCGCAGTCGGG

Product: putative glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRSNKNRHRAPFSESRLYWLVVALGAAFAAILLTTAPARAQSASDPVRIGGKNFTEQLILSSMTSQYLRAHGVDTTLTAG
LGSTLMRQAMESGQLDVVWDYTGTALIVFNKVEEKLDGPQSYARVKALDAAKGLVWLDPSAINNTYALAMPKERAGTATT
LSAYAEKMRADGEDKRHPLAVDMEFAARPDGLEPLKAAYGLPFTRKDVIQLDPGLVYTALKNNQVDLGLVYTTDGRVKGF
DLVLLEDDLNFFPPYNAVPVVRKAALDAHPELADLLNALAAKLDNAAMTDMNYQVDIDQQPVDKVAGDFLRSHGLI

Sequences:

>Translated_316_residues
MRSNKNRHRAPFSESRLYWLVVALGAAFAAILLTTAPARAQSASDPVRIGGKNFTEQLILSSMTSQYLRAHGVDTTLTAG
LGSTLMRQAMESGQLDVVWDYTGTALIVFNKVEEKLDGPQSYARVKALDAAKGLVWLDPSAINNTYALAMPKERAGTATT
LSAYAEKMRADGEDKRHPLAVDMEFAARPDGLEPLKAAYGLPFTRKDVIQLDPGLVYTALKNNQVDLGLVYTTDGRVKGF
DLVLLEDDLNFFPPYNAVPVVRKAALDAHPELADLLNALAAKLDNAAMTDMNYQVDIDQQPVDKVAGDFLRSHGLI
>Mature_316_residues
MRSNKNRHRAPFSESRLYWLVVALGAAFAAILLTTAPARAQSASDPVRIGGKNFTEQLILSSMTSQYLRAHGVDTTLTAG
LGSTLMRQAMESGQLDVVWDYTGTALIVFNKVEEKLDGPQSYARVKALDAAKGLVWLDPSAINNTYALAMPKERAGTATT
LSAYAEKMRADGEDKRHPLAVDMEFAARPDGLEPLKAAYGLPFTRKDVIQLDPGLVYTALKNNQVDLGLVYTTDGRVKGF
DLVLLEDDLNFFPPYNAVPVVRKAALDAHPELADLLNALAAKLDNAAMTDMNYQVDIDQQPVDKVAGDFLRSHGLI

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=281, Percent_Identity=30.9608540925267, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34454; Mature: 34454

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSNKNRHRAPFSESRLYWLVVALGAAFAAILLTTAPARAQSASDPVRIGGKNFTEQLIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHH
SSMTSQYLRAHGVDTTLTAGLGSTLMRQAMESGQLDVVWDYTGTALIVFNKVEEKLDGPQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHHHHHCCHH
SYARVKALDAAKGLVWLDPSAINNTYALAMPKERAGTATTLSAYAEKMRADGEDKRHPLA
HHHHHHHHHHHCCEEEECCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHCCCCCCCCCEE
VDMEFAARPDGLEPLKAAYGLPFTRKDVIQLDPGLVYTALKNNQVDLGLVYTTDGRVKGF
EEEECCCCCCCCCHHHHHHCCCCCCCCCEEECCCEEEEEECCCCEEEEEEEECCCCEEEE
DLVLLEDDLNFFPPYNAVPVVRKAALDAHPELADLLNALAAKLDNAAMTDMNYQVDIDQQ
EEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
PVDKVAGDFLRSHGLI
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSNKNRHRAPFSESRLYWLVVALGAAFAAILLTTAPARAQSASDPVRIGGKNFTEQLIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCHHHHHHH
SSMTSQYLRAHGVDTTLTAGLGSTLMRQAMESGQLDVVWDYTGTALIVFNKVEEKLDGPQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECHHHHHCCHH
SYARVKALDAAKGLVWLDPSAINNTYALAMPKERAGTATTLSAYAEKMRADGEDKRHPLA
HHHHHHHHHHHCCEEEECCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHCCCCCCCCCEE
VDMEFAARPDGLEPLKAAYGLPFTRKDVIQLDPGLVYTALKNNQVDLGLVYTTDGRVKGF
EEEECCCCCCCCCHHHHHHCCCCCCCCCEEECCCEEEEEECCCCEEEEEEEECCCCEEEE
DLVLLEDDLNFFPPYNAVPVVRKAALDAHPELADLLNALAAKLDNAAMTDMNYQVDIDQQ
EEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
PVDKVAGDFLRSHGLI
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592481; 10216873; 9384377 [H]