| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is 94309487
Identifier: 94309487
GI number: 94309487
Start: 577418
End: 578500
Strand: Reverse
Name: 94309487
Synonym: Rmet_0542
Alternate gene names: NA
Gene position: 578500-577418 (Counterclockwise)
Preceding gene: 94309491
Following gene: 94309482
Centisome position: 14.73
GC content: 63.43
Gene sequence:
>1083_bases ATGACATCGATGCACCGTTACACCCTGCCTGTGGACCAGACCGGCTGGTCCGTCGGCAGCCAGGTAGCGACAGAGTTCAA CTGGGAATACGACAATGGGTCGTCCAAGCTGCTGCAGCTCTACGAGACGAGCAAGAAACAGCAGTGGAACGCGAGCGACC GGATCGACTGGTCCCAGGAACTGGACCCGGAGAACCCGCAGGAACTCGATGACCGCATGATCCCGATCTACGGCACCAAG CTGTGGGACAAACTGGGCCATAACGACCGCATCGAGGTACGCCGCCACCAGCAGGCACATTCGCTGTCGCAGTTCCTGCA TGGCGAACAGGGCGCATTGATGGTCTCCGCGCGCATCGTGCAGATGGTGCCTGGCATGGATGCCAAGTTCTACGCAGCCA CGCAGACGATGGACGAAGCCCGCCACGTCGAGGCCTATTCGCGTCTGCTGCACGAGAAGGTCGGCCTGCTCTACCCCATC ACGCCCGGCCTGAAGTCGCTGCTGGAAACCACGCTGACCGATTCGCGCTGGGACTTCTGCTACCTCGGGATGCAGGTGCT GGTGGAAGGGCTGGCGCTCGCCGCCTTCCAGCGCATTCGCGACTTCGCGAAGAACCCGCTGGCCGCTTCGATCAATGCCT ACGTGATGCAGGACGAGTCGCGCCACGTCGCCTTCGGCCGCACCGCGCTGCGCGGCTACTATCCACAACTGACGGAGGCC GAACAACGCGAACGCGAGGACTTCGTGATCGAAGCCTGCCAGTTGATGCGCGAGCGCTTCGACCAGAAAGAAGTCTGGGG CCGGCTGGGCCTGCCCGAGGACGAATGCGCGCAGGCGGTACGCGATTCGGAAACCATGCGGCTGTTCCGCCAGCGCCTGT TCAGCCGGATCGTGCCGACGGTCAAGGACATCGGCCTGTGGAGCCAGCGCGTGCAGGACGCGTTTGCCGCCATGGGAGCG ATCGAGTTCGCCAACGTCGACGTCGAGGCCCAGTTCGCCAACGATCACAAGGTGGCCGAGGAATTCGACGCGCGCCGCCA TGTGATGGACACCATCAAGCAGGCCAGCGACAGCGCGCACTGA
Upstream 100 bases:
>100_bases ATAGTCGGAAGCCCCCGCAAGAACAAGGCCGATCTTCCCGGCTCCGGCGCAGCAGGTCACGATGATCGGCCAAACCCCAA GGCAAGCCAAAGGAGACGTC
Downstream 100 bases:
>100_bases GTCCGTGCAAGTGAAAAAACCCGGCAAGTATTTGCCGGGTTTTTTTTCGTGCCAGAGATTCGCCGGCAAGCCGGCCTCTG CTCGTTAGCCTTGCAGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTSMHRYTLPVDQTGWSVGSQVATEFNWEYDNGSSKLLQLYETSKKQQWNASDRIDWSQELDPENPQELDDRMIPIYGTK LWDKLGHNDRIEVRRHQQAHSLSQFLHGEQGALMVSARIVQMVPGMDAKFYAATQTMDEARHVEAYSRLLHEKVGLLYPI TPGLKSLLETTLTDSRWDFCYLGMQVLVEGLALAAFQRIRDFAKNPLAASINAYVMQDESRHVAFGRTALRGYYPQLTEA EQREREDFVIEACQLMRERFDQKEVWGRLGLPEDECAQAVRDSETMRLFRQRLFSRIVPTVKDIGLWSQRVQDAFAAMGA IEFANVDVEAQFANDHKVAEEFDARRHVMDTIKQASDSAH
Sequences:
>Translated_360_residues MTSMHRYTLPVDQTGWSVGSQVATEFNWEYDNGSSKLLQLYETSKKQQWNASDRIDWSQELDPENPQELDDRMIPIYGTK LWDKLGHNDRIEVRRHQQAHSLSQFLHGEQGALMVSARIVQMVPGMDAKFYAATQTMDEARHVEAYSRLLHEKVGLLYPI TPGLKSLLETTLTDSRWDFCYLGMQVLVEGLALAAFQRIRDFAKNPLAASINAYVMQDESRHVAFGRTALRGYYPQLTEA EQREREDFVIEACQLMRERFDQKEVWGRLGLPEDECAQAVRDSETMRLFRQRLFSRIVPTVKDIGLWSQRVQDAFAAMGA IEFANVDVEAQFANDHKVAEEFDARRHVMDTIKQASDSAH >Mature_359_residues TSMHRYTLPVDQTGWSVGSQVATEFNWEYDNGSSKLLQLYETSKKQQWNASDRIDWSQELDPENPQELDDRMIPIYGTKL WDKLGHNDRIEVRRHQQAHSLSQFLHGEQGALMVSARIVQMVPGMDAKFYAATQTMDEARHVEAYSRLLHEKVGLLYPIT PGLKSLLETTLTDSRWDFCYLGMQVLVEGLALAAFQRIRDFAKNPLAASINAYVMQDESRHVAFGRTALRGYYPQLTEAE QREREDFVIEACQLMRERFDQKEVWGRLGLPEDECAQAVRDSETMRLFRQRLFSRIVPTVKDIGLWSQRVQDAFAAMGAI EFANVDVEAQFANDHKVAEEFDARRHVMDTIKQASDSAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41471; Mature: 41340
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSMHRYTLPVDQTGWSVGSQVATEFNWEYDNGSSKLLQLYETSKKQQWNASDRIDWSQE CCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHC LDPENPQELDDRMIPIYGTKLWDKLGHNDRIEVRRHQQAHSLSQFLHGEQGALMVSARIV CCCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QMVPGMDAKFYAATQTMDEARHVEAYSRLLHEKVGLLYPITPGLKSLLETTLTDSRWDFC HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCHHH YLGMQVLVEGLALAAFQRIRDFAKNPLAASINAYVMQDESRHVAFGRTALRGYYPQLTEA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCH EQREREDFVIEACQLMRERFDQKEVWGRLGLPEDECAQAVRDSETMRLFRQRLFSRIVPT HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHH VKDIGLWSQRVQDAFAAMGAIEFANVDVEAQFANDHKVAEEFDARRHVMDTIKQASDSAH HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSMHRYTLPVDQTGWSVGSQVATEFNWEYDNGSSKLLQLYETSKKQQWNASDRIDWSQE CCCCCEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHC LDPENPQELDDRMIPIYGTKLWDKLGHNDRIEVRRHQQAHSLSQFLHGEQGALMVSARIV CCCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QMVPGMDAKFYAATQTMDEARHVEAYSRLLHEKVGLLYPITPGLKSLLETTLTDSRWDFC HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCCHHH YLGMQVLVEGLALAAFQRIRDFAKNPLAASINAYVMQDESRHVAFGRTALRGYYPQLTEA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCH EQREREDFVIEACQLMRERFDQKEVWGRLGLPEDECAQAVRDSETMRLFRQRLFSRIVPT HHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHH VKDIGLWSQRVQDAFAAMGAIEFANVDVEAQFANDHKVAEEFDARRHVMDTIKQASDSAH HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA