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The map label for this gene is exbB2 [C]

Identifier: 94309482

GI number: 94309482

Start: 571191

End: 571811

Strand: Reverse

Name: exbB2 [C]

Synonym: Rmet_0537

Alternate gene names: 94309482

Gene position: 571811-571191 (Counterclockwise)

Preceding gene: 94309487

Following gene: 94309481

Centisome position: 14.56

GC content: 67.31

Gene sequence:

>621_bases
GTGTTTTCCATCATTCAAGCGGCCGGCTGGCCGATCTGGCCGTTGCTGCTCGCGTCGGTCATCGCACTGGCGCTGATCGT
CGAGCGGTTCATTTCCCTGAAGCGCAGCAAGATCCTGCCGCCCAAGCTGTACGAGGAGGCGCTCTCCGCCGCCCAGCAGC
GCAGGGCGACGCCCGAGGTTGTGAACAACCTTGAGCAGAACTCGCCGCTTGGCCGCGTGCTGGCCGCCGGCCTGCGCCAC
GTGGTGCTGCAACCGCAGACGTCGCGCGACGCCGCCAAGGACGTGGTCGAGGAAGCCGGCCGCGTGGTCGCGCACGAACT
CGAGCGCTACCTGAACGCATTGGGCACGATCGCCTCGGTGGCCCCGCTGATGGGCCTGCTCGGCACGGTCATCGGCATGA
TCGAGATCTTCGGCAACCAGGGCGGCACCGGTGCCAATCCGGAGCAGCTCGCGCACGGGATCTCGGTGGCGCTGTACAAC
ACCGCGTTCGGCCTGATCGTCGCCATCCCGGCGCTGATTTTCTGGCGCTATTTCCGCCGCCGCGTGGACGACTACGTGGC
CGAGCTGGAATTCCGCGCGACCTCGTTCCTCGACGCCATCCTGCCCCAGCGGCGGGTGTAA

Upstream 100 bases:

>100_bases
TTGCCGCTGCGCGGGGCGCGTCCCGGCGCATCAAAGGCTGCCACGCATCAATCGTTCTGATTTCGGGTCTGTCGTTGGTT
TGTAGAATTCGGGGGTCCAC

Downstream 100 bases:

>100_bases
CACCGCGGGAGCGCGCCATGCATTTCCGTTCCCGTCAGCGACGCGAGGAGCCGGAGATCAACCTGATCCCGCTCATCGAC
GTGTTGCTCGTGATCCTCAT

Product: biopolymer transport channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFSIIQAAGWPIWPLLLASVIALALIVERFISLKRSKILPPKLYEEALSAAQQRRATPEVVNNLEQNSPLGRVLAAGLRH
VVLQPQTSRDAAKDVVEEAGRVVAHELERYLNALGTIASVAPLMGLLGTVIGMIEIFGNQGGTGANPEQLAHGISVALYN
TAFGLIVAIPALIFWRYFRRRVDDYVAELEFRATSFLDAILPQRRV

Sequences:

>Translated_206_residues
MFSIIQAAGWPIWPLLLASVIALALIVERFISLKRSKILPPKLYEEALSAAQQRRATPEVVNNLEQNSPLGRVLAAGLRH
VVLQPQTSRDAAKDVVEEAGRVVAHELERYLNALGTIASVAPLMGLLGTVIGMIEIFGNQGGTGANPEQLAHGISVALYN
TAFGLIVAIPALIFWRYFRRRVDDYVAELEFRATSFLDAILPQRRV
>Mature_206_residues
MFSIIQAAGWPIWPLLLASVIALALIVERFISLKRSKILPPKLYEEALSAAQQRRATPEVVNNLEQNSPLGRVLAAGLRH
VVLQPQTSRDAAKDVVEEAGRVVAHELERYLNALGTIASVAPLMGLLGTVIGMIEIFGNQGGTGANPEQLAHGISVALYN
TAFGLIVAIPALIFWRYFRRRVDDYVAELEFRATSFLDAILPQRRV

Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). [C]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 22608; Mature: 22608

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSIIQAAGWPIWPLLLASVIALALIVERFISLKRSKILPPKLYEEALSAAQQRRATPEV
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
VNNLEQNSPLGRVLAAGLRHVVLQPQTSRDAAKDVVEEAGRVVAHELERYLNALGTIASV
HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APLMGLLGTVIGMIEIFGNQGGTGANPEQLAHGISVALYNTAFGLIVAIPALIFWRYFRR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVDDYVAELEFRATSFLDAILPQRRV
HHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFSIIQAAGWPIWPLLLASVIALALIVERFISLKRSKILPPKLYEEALSAAQQRRATPEV
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH
VNNLEQNSPLGRVLAAGLRHVVLQPQTSRDAAKDVVEEAGRVVAHELERYLNALGTIASV
HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APLMGLLGTVIGMIEIFGNQGGTGANPEQLAHGISVALYNTAFGLIVAIPALIFWRYFRR
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVDDYVAELEFRATSFLDAILPQRRV
HHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]