| Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
|---|---|
| Accession | NC_007973 |
| Length | 3,928,089 |
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The map label for this gene is ywqA [H]
Identifier: 94309439
GI number: 94309439
Start: 520891
End: 523968
Strand: Direct
Name: ywqA [H]
Synonym: Rmet_0494
Alternate gene names: 94309439
Gene position: 520891-523968 (Clockwise)
Preceding gene: 94309432
Following gene: 94309440
Centisome position: 13.26
GC content: 70.05
Gene sequence:
>3078_bases ATGGTCGTCTCCCTCTGCAGCCCAGGTAAATGTCGCAAAGGCACCATTGTAAGCCGCGCGTCCTTGCGTGCCAACGAAGG GCGGCGGATAGAGCGTTCTACAATCGCACCTTCCGACCTTCCACCGTTCCGCAGCCGCGTGTCCCAACCCGAACTCCCCG TCGAGCGTGCCGATCATGATGCCGATTCCGTCGCGGATGGCGGCTGGCAGGCCACGCTTTGCGCACTTGAGGCATTGGCG GGGGGCGTGGATGAAGCCGCCGGCACCGGCGACGGACGCCGCCTGCTCTGGGCGCTGACCCTCGATGCAGACGGTGTGGT CGGGACGATCGAGCCGCTGGAGCAGACTCACGGGGCGCGTGGCTGGAGCAAGCCCAGGCCGGTGCCGCTGGCCCGTGTGG CCGAGGACGACACCCTGCCACAGTGGGATGTCCGCGTCGCCCGTGCCATCCGCCGGGACGCATCGCGCAACCGGCGTCAC GTGCTGGACCGCGCCGCCGCCGTGGTGGCGCTGGTGGGGCATCCGGCCGTGGTGCTGTCCCATGCGCCGACGGTGCCGAT GGAAGTGGTCGAGTCCGCGCCTTCGCTCGAGGCGGTGCGCGAGGGCGACCGCTACGTGCTGCGGATCGTGCCGCCACTGC GCGAGGCGCTGGCCATGGAGGACTTCCTGCCCGCCGCCGCGCGTCAGGAAGCCGAGTCGCTACGCCAGATCACCGTGCTG CAGGATGGTCCGCGCCGGCTGCGCGTGGTCCGCTTCACGCCGGCGCAGCAGGGCGCGGCCAAGCTCATCGCGGGCGGACT CTCCGTGCCGGCCGATGCCCAGGCGCGGCTCGACAGCACGTTGCGCGCGCTGGCGGGCCACTTCCAGATTCACGCCGACA GCTCGGGCGAGGCACGCGAGCGCGACCCGGAGTCGCGGCTGCGTGCCGAGGTGGCGCCGGTTGGGCGCGGCATCAGCCTG CGGCTGGTGGTGACGCCGCTTGGCGTGCTCGGGCCCAGGCTCGCGCCGGGCCACGGCCGCGCGCAACTGATGGCGACGAT TGGCGGCGAGACGCACGTGACGTACCGCGATCTCGATGCCGAGCACGCGCACGTGGCCGAGGTATTCGAGGCGTTGCCGT TCCTCGTGCAGCAGGCCCCCGCAGGCGGCGAGCACACCTGGACGCTGGACGATCCCGAGGACGCGCTGACCGCCATCGAG GTGTTGCCCGGACTGGCCGGCGTGATCGATCTCGAATGGCCGCGTGGCCGTGAGTTGCGCGTCTTGCCGGCTGATATCGC GCAGCTTGCCGTCAGCGTGGAGACCGGCAGCGAATGGTTCAAGCTCGTGGGCGAACTGCGCGTGGCCGAGGGGCTGGTGA TCTCGCTCGAAAAACTGGTCGCGTGGGCGCACGGCCATGCGGGCCGCTTCATGCCGATGGCGCACGGCGTCTACGTGGCG CTGACCCGCCAGTTGCGAGACCGGCTGCGCGATCTGGCCGGCGTGGGCGATGGCGTCCGGGACGGCATCCGTGTGCCGCT GGTGGCCGCGCCCTGGCTCGACGACGTGCTGGCTGGCGCCGGTATCGACCCCGACGCGCACTTCCGCACCCGCGTGAAGC AACTGCGTGCCGCGCGTGGTCACGATGCGCCGGTGCCGCCGACGCTGGTGGCGGAGTTGCGGCCGTATCAGCTCGAAGGC TTCCGCTGGATGATGTCGCTGGCAGAAGCCGGCTTTGGCGCATGCCTGGCCGATGACATGGGCCTGGGCAAGACGCTGCA GTCGCTGGCCGTGCTGCTGGCGCGGGCGGCGGGTGGCCCGGCCCTGGTTGTCGCGCCAACCTCGGTCTGCGGCAACTGGG CCACAGAGGCGCGTCGCTTCGCCCCGGCGTTGCGGGTCCACGTCTATGCCGATGGCGACCGCGAGGCGATCGTCGGGCAG GCCGCCGCGCACGATCTGGTGATCGTCTCGTACAACCTGCTGCAACAGGCCCGCAAGGCTTTCTGCGACCGTCACTGGCA TACGGTCGTGGCTGACGAGGCGCAGTCGTTCAAGAATCCGTCTTCGCGCCGCGCACAGGCGATGTTCGCGCTGCCGGCCG ATTGCCGCATCGCGCTTTCCGGTACACCAGTCGAAAACCGTCTTGCCGAACTCTGGGCCGTGATGCGTTTCTGCGTGCCG GGGTTGCTTGGCTCGCTGGCACGCTTCAACGAGCATTTCGCGAATCCGATCGAACGCAGCGGCGCACGCGATCCGCGTCA GCGGCTCCGGCGCATGATTGCCCCGTTCGTGTTGCGCCGGACCAAGGCGCAGGTCCTCGACGAATTGCCGCCGCGCACGG AACTGGTGATTCGCGTCACGCCCGAGCCCACGGAAGCCGCCCACTACGAGGCGCTGCGCCGGCAGGCGCTTTCCGAGGCG GAACGGGCGCTGCTGCGTCCGCGCAAGGACAAGAAGGCGCCCGCTGCCATGACCGAGCCCGAGGCGCGCATCCATGTGCT TGCCCAGTTGATGCGGATGCGCCGTGCCGCGTGCGATCCGCGACTGGTCACGCCCGATGTAGGGCAGCCCGGCGCCAAGG TGCGGGCATTCGCCGAACTGGCGGCCACGCTGGCCGCCAACGGGCATAAGACGCTGGTCTTCAGCCAGTTCGTCGATTTC CTGCAGATGCTGCGGCAGGCGCTCGTTGACGCGGGTCTGGCGTGGCAGTACCTCGACGGCGCGACACCGGCCGGCGAGCG CACGCGACGCGTGGCGGCATTTCAGGCGGGCGAGGGCGATGTGTTCCTGATCAGCCTGAAGGCAGGCGGGTTCGGCCTGA ACCTGACCGCCGCCGACTACATCGTGATTGCCGATCCCTGGTGGAACCCGGCTGCCGAGGATCAGGCGATGGGCCGCGCG CACCGCATCGGCCAGCAGCGGCCGGTCACGGTCTACCGGCTGATCGCGGCCGGCACGATCGAGGAGCGCATCGTCGATCT GCACCAGGGCAAGCGGGCGCTGGCGGACGGCGTGCTCGACGCGATGGATGGCGAGGCGATCGGCCGCGATGTGCCGTTGC CCGATGTCGATGAACTGGTAGGGCTGCTGCGGCGATGA
Upstream 100 bases:
>100_bases GCCGTAATGCAGCGTGTGCGTGAGTACGTGAATCTTTGCGTCACGCCACTCAATCAGCTTGCCATCCATCCAGATCTTGC CGTCGCGATCTGCCATCGAC
Downstream 100 bases:
>100_bases GCGATACGCCGCTCAGGCACCAAACGGTATACAAAACGGCTCCCATGCATGGTGCATCGCACCATCAATCCGCCACCTGA TTTCCCCTCATTTCCCTTTT
Product: Superfamily II DNA/RNA helicase, SNF2 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 1025; Mature: 1025
Protein sequence:
>1025_residues MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHDADSVADGGWQATLCALEALA GGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGARGWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRH VLDRAAAVVALVGHPAVVLSHAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARERDPESRLRAEVAPVGRGISL RLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDAEHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIE VLPGLAGVIDLEWPRGRELRVLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARGHDAPVPPTLVAELRPYQLEG FRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGPALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQ AAAHDLVIVSYNLLQQARKAFCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVTPEPTEAAHYEALRRQALSEA ERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDPRLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDF LQMLRQALVDAGLAWQYLDGATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELVGLLRR
Sequences:
>Translated_1025_residues MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHDADSVADGGWQATLCALEALA GGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGARGWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRH VLDRAAAVVALVGHPAVVLSHAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARERDPESRLRAEVAPVGRGISL RLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDAEHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIE VLPGLAGVIDLEWPRGRELRVLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARGHDAPVPPTLVAELRPYQLEG FRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGPALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQ AAAHDLVIVSYNLLQQARKAFCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVTPEPTEAAHYEALRRQALSEA ERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDPRLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDF LQMLRQALVDAGLAWQYLDGATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELVGLLRR >Mature_1025_residues MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHDADSVADGGWQATLCALEALA GGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGARGWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRH VLDRAAAVVALVGHPAVVLSHAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARERDPESRLRAEVAPVGRGISL RLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDAEHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIE VLPGLAGVIDLEWPRGRELRVLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARGHDAPVPPTLVAELRPYQLEG FRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGPALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQ AAAHDLVIVSYNLLQQARKAFCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVTPEPTEAAHYEALRRQALSEA ERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDPRLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDF LQMLRQALVDAGLAWQYLDGATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELVGLLRR
Specific function: Transcription Regulator That Activates Transcription By Stimulating RNA Polymerase (Rnap) Recycling In Case Of Stress Conditions Such As Supercoiled DNA Or High Salt Concentrations. Probably Acts By Releasing The Rnap, When It Is Trapped Or Immobilized On
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164419749, Length=469, Percent_Identity=33.6886993603412, Blast_Score=260, Evalue=4e-69, Organism=Homo sapiens, GI21071044, Length=483, Percent_Identity=32.9192546583851, Blast_Score=253, Evalue=1e-66, Organism=Homo sapiens, GI21071058, Length=499, Percent_Identity=31.8637274549098, Blast_Score=246, Evalue=6e-65, Organism=Homo sapiens, GI21914927, Length=525, Percent_Identity=29.3333333333333, Blast_Score=244, Evalue=3e-64, Organism=Homo sapiens, GI27477070, Length=557, Percent_Identity=30.7001795332136, Blast_Score=239, Evalue=7e-63, Organism=Homo sapiens, GI148612870, Length=487, Percent_Identity=30.5954825462012, Blast_Score=226, Evalue=8e-59, Organism=Homo sapiens, GI6912622, Length=515, Percent_Identity=28.5436893203883, Blast_Score=221, Evalue=3e-57, Organism=Homo sapiens, GI24308089, Length=490, Percent_Identity=29.3877551020408, Blast_Score=217, Evalue=4e-56, Organism=Homo sapiens, GI58219008, Length=533, Percent_Identity=29.6435272045028, Blast_Score=217, Evalue=5e-56, Organism=Homo sapiens, GI118421089, Length=575, Percent_Identity=28.695652173913, Blast_Score=217, Evalue=6e-56, Organism=Homo sapiens, GI192807320, Length=493, Percent_Identity=28.1947261663286, Blast_Score=216, Evalue=7e-56, Organism=Homo sapiens, GI192807318, Length=493, Percent_Identity=28.1947261663286, Blast_Score=216, Evalue=8e-56, Organism=Homo sapiens, GI192807314, Length=493, Percent_Identity=28.1947261663286, Blast_Score=216, Evalue=8e-56, Organism=Homo sapiens, GI192807316, Length=493, Percent_Identity=28.1947261663286, Blast_Score=216, Evalue=8e-56, Organism=Homo sapiens, GI192807312, Length=493, Percent_Identity=28.1947261663286, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI21071056, Length=493, Percent_Identity=28.1947261663286, Blast_Score=215, Evalue=1e-55, Organism=Homo sapiens, GI192807323, Length=493, Percent_Identity=28.1947261663286, Blast_Score=215, Evalue=2e-55, Organism=Homo sapiens, GI48255898, Length=493, Percent_Identity=27.789046653144, Blast_Score=213, Evalue=6e-55, Organism=Homo sapiens, GI48255900, Length=493, Percent_Identity=27.789046653144, Blast_Score=213, Evalue=7e-55, Organism=Homo sapiens, GI52630322, Length=524, Percent_Identity=28.4351145038168, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI52630326, Length=524, Percent_Identity=28.4351145038168, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI158420731, Length=524, Percent_Identity=28.4351145038168, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI190358536, Length=519, Percent_Identity=29.4797687861272, Blast_Score=209, Evalue=1e-53, Organism=Homo sapiens, GI190358532, Length=519, Percent_Identity=29.4797687861272, Blast_Score=209, Evalue=1e-53, Organism=Homo sapiens, GI51599156, Length=489, Percent_Identity=29.4478527607362, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI190358534, Length=512, Percent_Identity=27.734375, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI4557565, Length=507, Percent_Identity=30.3747534516765, Blast_Score=208, Evalue=2e-53, Organism=Homo sapiens, GI68299795, Length=483, Percent_Identity=29.6066252587992, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI29244924, Length=518, Percent_Identity=28.5714285714286, Blast_Score=207, Evalue=4e-53, Organism=Homo sapiens, GI114326455, Length=491, Percent_Identity=29.1242362525458, Blast_Score=206, Evalue=1e-52, Organism=Homo sapiens, GI282165704, Length=491, Percent_Identity=29.1242362525458, Blast_Score=205, Evalue=2e-52, Organism=Homo sapiens, GI58331268, Length=536, Percent_Identity=30.2238805970149, Blast_Score=203, Evalue=8e-52, Organism=Homo sapiens, GI54112403, Length=509, Percent_Identity=29.0766208251473, Blast_Score=202, Evalue=2e-51, Organism=Homo sapiens, GI95147342, Length=486, Percent_Identity=28.6008230452675, Blast_Score=200, Evalue=7e-51, Organism=Homo sapiens, GI216548193, Length=532, Percent_Identity=27.4436090225564, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI216548186, Length=532, Percent_Identity=27.4436090225564, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI38708321, Length=277, Percent_Identity=37.1841155234657, Blast_Score=176, Evalue=1e-43, Organism=Homo sapiens, GI40807471, Length=611, Percent_Identity=25.0409165302782, Blast_Score=173, Evalue=8e-43, Organism=Homo sapiens, GI146219843, Length=320, Percent_Identity=33.125, Blast_Score=166, Evalue=9e-41, Organism=Homo sapiens, GI62860046, Length=454, Percent_Identity=26.431718061674, Blast_Score=145, Evalue=2e-34, Organism=Homo sapiens, GI187761314, Length=498, Percent_Identity=27.9116465863454, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI21071060, Length=498, Percent_Identity=27.9116465863454, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI56549696, Length=311, Percent_Identity=29.2604501607717, Blast_Score=117, Evalue=6e-26, Organism=Homo sapiens, GI21071052, Length=133, Percent_Identity=41.3533834586466, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI21071054, Length=133, Percent_Identity=41.3533834586466, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI20336209, Length=180, Percent_Identity=32.7777777777778, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI20336205, Length=180, Percent_Identity=32.7777777777778, Blast_Score=96, Evalue=2e-19, Organism=Homo sapiens, GI168823443, Length=157, Percent_Identity=33.1210191082803, Blast_Score=95, Evalue=3e-19, Organism=Homo sapiens, GI289547541, Length=143, Percent_Identity=33.5664335664336, Blast_Score=82, Evalue=4e-15, Organism=Homo sapiens, GI27436873, Length=143, Percent_Identity=33.5664335664336, Blast_Score=81, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25144179, Length=475, Percent_Identity=30.3157894736842, Blast_Score=240, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17539642, Length=478, Percent_Identity=29.7071129707113, Blast_Score=231, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17551114, Length=494, Percent_Identity=28.7449392712551, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI32563629, Length=483, Percent_Identity=31.2629399585921, Blast_Score=221, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71988744, Length=548, Percent_Identity=27.1897810218978, Blast_Score=218, Evalue=2e-56, Organism=Caenorhabditis elegans, GI17569817, Length=527, Percent_Identity=27.8937381404175, Blast_Score=215, Evalue=8e-56, Organism=Caenorhabditis elegans, GI193204424, Length=507, Percent_Identity=30.1775147928994, Blast_Score=210, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17562600, Length=527, Percent_Identity=27.5142314990512, Blast_Score=203, Evalue=4e-52, Organism=Caenorhabditis elegans, GI193203140, Length=533, Percent_Identity=29.0806754221388, Blast_Score=199, Evalue=6e-51, Organism=Caenorhabditis elegans, GI17508659, Length=539, Percent_Identity=27.2727272727273, Blast_Score=191, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71995707, Length=499, Percent_Identity=27.6553106212425, Blast_Score=177, Evalue=3e-44, Organism=Caenorhabditis elegans, GI115534248, Length=320, Percent_Identity=31.875, Blast_Score=176, Evalue=7e-44, Organism=Caenorhabditis elegans, GI71991518, Length=480, Percent_Identity=26.6666666666667, Blast_Score=174, Evalue=2e-43, Organism=Caenorhabditis elegans, GI25148958, Length=454, Percent_Identity=27.0925110132159, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25148960, Length=454, Percent_Identity=27.0925110132159, Blast_Score=140, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17552194, Length=454, Percent_Identity=27.0925110132159, Blast_Score=140, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17540630, Length=184, Percent_Identity=33.695652173913, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI193203249, Length=184, Percent_Identity=32.6086956521739, Blast_Score=107, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17561718, Length=178, Percent_Identity=33.1460674157303, Blast_Score=95, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538806, Length=169, Percent_Identity=33.1360946745562, Blast_Score=89, Evalue=9e-18, Organism=Caenorhabditis elegans, GI71980419, Length=181, Percent_Identity=29.8342541436464, Blast_Score=84, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6324864, Length=477, Percent_Identity=29.769392033543, Blast_Score=238, Evalue=4e-63, Organism=Saccharomyces cerevisiae, GI6324879, Length=466, Percent_Identity=30.4721030042918, Blast_Score=238, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6319722, Length=468, Percent_Identity=29.4871794871795, Blast_Score=236, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6325175, Length=533, Percent_Identity=28.1425891181989, Blast_Score=232, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6321153, Length=526, Percent_Identity=29.0874524714829, Blast_Score=229, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6321012, Length=513, Percent_Identity=30.2144249512671, Blast_Score=223, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6322065, Length=484, Percent_Identity=29.5454545454545, Blast_Score=221, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6322495, Length=555, Percent_Identity=28.2882882882883, Blast_Score=214, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6321275, Length=564, Percent_Identity=27.6595744680851, Blast_Score=194, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6319300, Length=527, Percent_Identity=28.6527514231499, Blast_Score=188, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6319547, Length=551, Percent_Identity=27.5862068965517, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6321289, Length=344, Percent_Identity=29.0697674418605, Blast_Score=163, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6320541, Length=359, Percent_Identity=29.2479108635098, Blast_Score=160, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6319590, Length=372, Percent_Identity=25.5376344086022, Blast_Score=121, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6323060, Length=153, Percent_Identity=37.2549019607843, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324765, Length=202, Percent_Identity=30.1980198019802, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI281361889, Length=533, Percent_Identity=30.7692307692308, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI24653134, Length=497, Percent_Identity=31.58953722334, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24653132, Length=497, Percent_Identity=31.58953722334, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI17737463, Length=497, Percent_Identity=31.58953722334, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24664914, Length=495, Percent_Identity=28.2828282828283, Blast_Score=216, Evalue=5e-56, Organism=Drosophila melanogaster, GI17985967, Length=495, Percent_Identity=28.2828282828283, Blast_Score=216, Evalue=5e-56, Organism=Drosophila melanogaster, GI24664907, Length=495, Percent_Identity=28.2828282828283, Blast_Score=216, Evalue=6e-56, Organism=Drosophila melanogaster, GI28574896, Length=495, Percent_Identity=28.2828282828283, Blast_Score=216, Evalue=6e-56, Organism=Drosophila melanogaster, GI85724914, Length=519, Percent_Identity=30.8285163776493, Blast_Score=215, Evalue=1e-55, Organism=Drosophila melanogaster, GI24583161, Length=520, Percent_Identity=30.5769230769231, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI17137266, Length=520, Percent_Identity=28.4615384615385, Blast_Score=203, Evalue=4e-52, Organism=Drosophila melanogaster, GI24666729, Length=528, Percent_Identity=26.3257575757576, Blast_Score=202, Evalue=8e-52, Organism=Drosophila melanogaster, GI17136368, Length=527, Percent_Identity=27.7039848197343, Blast_Score=196, Evalue=5e-50, Organism=Drosophila melanogaster, GI281366478, Length=492, Percent_Identity=26.4227642276423, Blast_Score=194, Evalue=4e-49, Organism=Drosophila melanogaster, GI24667055, Length=492, Percent_Identity=26.4227642276423, Blast_Score=194, Evalue=4e-49, Organism=Drosophila melanogaster, GI62472261, Length=492, Percent_Identity=26.4227642276423, Blast_Score=194, Evalue=4e-49, Organism=Drosophila melanogaster, GI221330583, Length=486, Percent_Identity=28.3950617283951, Blast_Score=183, Evalue=6e-46, Organism=Drosophila melanogaster, GI17986031, Length=486, Percent_Identity=28.3950617283951, Blast_Score=183, Evalue=7e-46, Organism=Drosophila melanogaster, GI28573600, Length=250, Percent_Identity=36.8, Blast_Score=167, Evalue=4e-41, Organism=Drosophila melanogaster, GI24648168, Length=275, Percent_Identity=34.5454545454545, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24656962, Length=249, Percent_Identity=36.5461847389558, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI24656966, Length=249, Percent_Identity=36.5461847389558, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI24581780, Length=472, Percent_Identity=27.1186440677966, Blast_Score=134, Evalue=4e-31, Organism=Drosophila melanogaster, GI85724912, Length=370, Percent_Identity=28.3783783783784, Blast_Score=127, Evalue=4e-29, Organism=Drosophila melanogaster, GI24644932, Length=181, Percent_Identity=33.7016574585635, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI281361297, Length=161, Percent_Identity=39.1304347826087, Blast_Score=104, Evalue=4e-22, Organism=Drosophila melanogaster, GI62484263, Length=151, Percent_Identity=34.4370860927152, Blast_Score=97, Evalue=7e-20, Organism=Drosophila melanogaster, GI21356675, Length=180, Percent_Identity=32.7777777777778, Blast_Score=92, Evalue=3e-18, Organism=Drosophila melanogaster, GI24650076, Length=180, Percent_Identity=32.7777777777778, Blast_Score=92, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR022138 - InterPro: IPR000330 [H]
Pfam domain/function: PF12419 DUF3670; PF00271 Helicase_C; PF00176 SNF2_N [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 111134; Mature: 111134
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHD CEEECCCCCCCCCCCEEEHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCHHHCCCC ADSVADGGWQATLCALEALAGGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGAR HHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCEECCHHHHHHCCCC GWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRHVLDRAAAVVALVGHPAVVLS CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC HAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL CCCCCHHHHHHCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHEEHEE QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARE CCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCC RDPESRLRAEVAPVGRGISLRLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDA CCHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCCCEEEEEEECCCEEEEEECCCC EHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIEVLPGLAGVIDLEWPRGRELR CHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEE VLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA EEHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARG HHHHHHHHHHHHHCCCCCHHCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCC HDAPVPPTLVAELRPYQLEGFRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGP CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCC ALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQAAAHDLVIVSYNLLQQARKA EEEEECHHHHCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHH FCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP HHHCCCHHHHHHHHHHCCCCCHHHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHH GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVT HHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC PEPTEAAHYEALRRQALSEAERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC RLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDFLQMLRQALVDAGLAWQYLDG CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCC ATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA CCCCCHHHHEEHEEECCCCCEEEEEEECCCCEEEEEECCEEEEECCCCCCCCHHHHHHHH HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELV HHCCCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH GLLRR HHHCC >Mature Secondary Structure MVVSLCSPGKCRKGTIVSRASLRANEGRRIERSTIAPSDLPPFRSRVSQPELPVERADHD CEEECCCCCCCCCCCEEEHHHHCCCCCCEEECCCCCCCCCCHHHHHCCCCCCCHHHCCCC ADSVADGGWQATLCALEALAGGVDEAAGTGDGRRLLWALTLDADGVVGTIEPLEQTHGAR HHHHCCCCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCEECCHHHHHHCCCC GWSKPRPVPLARVAEDDTLPQWDVRVARAIRRDASRNRRHVLDRAAAVVALVGHPAVVLS CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC HAPTVPMEVVESAPSLEAVREGDRYVLRIVPPLREALAMEDFLPAAARQEAESLRQITVL CCCCCHHHHHHCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHEEHEE QDGPRRLRVVRFTPAQQGAAKLIAGGLSVPADAQARLDSTLRALAGHFQIHADSSGEARE CCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCCCC RDPESRLRAEVAPVGRGISLRLVVTPLGVLGPRLAPGHGRAQLMATIGGETHVTYRDLDA CCHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCCCCEEEEEEECCCEEEEEECCCC EHAHVAEVFEALPFLVQQAPAGGEHTWTLDDPEDALTAIEVLPGLAGVIDLEWPRGRELR CHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEE VLPADIAQLAVSVETGSEWFKLVGELRVAEGLVISLEKLVAWAHGHAGRFMPMAHGVYVA EEHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LTRQLRDRLRDLAGVGDGVRDGIRVPLVAAPWLDDVLAGAGIDPDAHFRTRVKQLRAARG HHHHHHHHHHHHHCCCCCHHCCCCCCEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHCC HDAPVPPTLVAELRPYQLEGFRWMMSLAEAGFGACLADDMGLGKTLQSLAVLLARAAGGP CCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHCCCCC ALVVAPTSVCGNWATEARRFAPALRVHVYADGDREAIVGQAAAHDLVIVSYNLLQQARKA EEEEECHHHHCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHHCCEEEEEHHHHHHHHHH FCDRHWHTVVADEAQSFKNPSSRRAQAMFALPADCRIALSGTPVENRLAELWAVMRFCVP HHHCCCHHHHHHHHHHCCCCCHHHHHEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHH GLLGSLARFNEHFANPIERSGARDPRQRLRRMIAPFVLRRTKAQVLDELPPRTELVIRVT HHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC PEPTEAAHYEALRRQALSEAERALLRPRKDKKAPAAMTEPEARIHVLAQLMRMRRAACDP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC RLVTPDVGQPGAKVRAFAELAATLAANGHKTLVFSQFVDFLQMLRQALVDAGLAWQYLDG CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCC ATPAGERTRRVAAFQAGEGDVFLISLKAGGFGLNLTAADYIVIADPWWNPAAEDQAMGRA CCCCCHHHHEEHEEECCCCCEEEEEEECCCCEEEEEECCEEEEECCCCCCCCHHHHHHHH HRIGQQRPVTVYRLIAAGTIEERIVDLHQGKRALADGVLDAMDGEAIGRDVPLPDVDELV HHCCCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH GLLRR HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9353933 [H]