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The map label for this gene is ybhB [H]

Identifier: 94309364

GI number: 94309364

Start: 444700

End: 445347

Strand: Direct

Name: ybhB [H]

Synonym: Rmet_0419

Alternate gene names: 94309364

Gene position: 444700-445347 (Clockwise)

Preceding gene: 94309363

Following gene: 94309365

Centisome position: 11.32

GC content: 64.97

Gene sequence:

>648_bases
ATGAAACTCTGGAGCAAGGCCTTTGCCGACAATGCGCCGATTCCCGGCGAGTTTGCGTTTTGCGTGCCCGACTCGGCCAG
TCATGTCGCGCTGTCGAGCAACCGCAACCCGGATCTGCATTGGGATGACGTGCCCGCCGCCACCCGTTCGTTCGTGCTGA
TCTGCCACGACCGCGATGTGCCGAGCAAGGGCGACGACGTCAATCAGGAGGGCCGCGAGGTTCCGGAATCGCTGCCGCGC
GTGGACTTTTTCCACTGGGTGCTGATCGACGTTCCGCCCGGTCTGCACACGATCTCAGCCGGCTCGCACAGCGACGGCGT
GATCGCGCGAGGCAAGCCGGGCCCCGAGGCGCTGGTGGGTACCGCCACGGCTGGCGGCCTGCGCCACGGCCTGAACGACT
ACACGGGCTGGTTCGCCGGTGACGCGGACATGAAGGGCGACTACTTCGGCTATGACGGCCCGTGCCCTCCGTGGAACGAT
TCGATCATTCACCACTACGTGTTCACCGTGTACGCGCTCGATATCGACCGCGTTCCGGTCGAAGGCAAGTTCACCGGTGC
CGACGTGCGCCGCGCGATCCAGGGCCATGTTCTGGCCGAGGCCAGCCTGACCGGCACATACACCCTTAACCCGAGGCTCG
TGAAGTAA

Upstream 100 bases:

>100_bases
GGTCAGCCTGACCAACGATGGTCCCGTGACGTTCTGGCTGCGCGTGCCACCGGCAGCGAATGCCTGACGTCGCCCGAGAT
CGACACCCAAGGAGATCCCC

Downstream 100 bases:

>100_bases
CCTCGTTCGCCCCGCCGGGCGTCAGATCCGGCCCGAACCGTCGCCCCCCGAGGAATCGGCAATGTCGCAAAGCACCGGCC
CGCAATCGCTGGCCTACACC

Product: phospholipid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MKLWSKAFADNAPIPGEFAFCVPDSASHVALSSNRNPDLHWDDVPAATRSFVLICHDRDVPSKGDDVNQEGREVPESLPR
VDFFHWVLIDVPPGLHTISAGSHSDGVIARGKPGPEALVGTATAGGLRHGLNDYTGWFAGDADMKGDYFGYDGPCPPWND
SIIHHYVFTVYALDIDRVPVEGKFTGADVRRAIQGHVLAEASLTGTYTLNPRLVK

Sequences:

>Translated_215_residues
MKLWSKAFADNAPIPGEFAFCVPDSASHVALSSNRNPDLHWDDVPAATRSFVLICHDRDVPSKGDDVNQEGREVPESLPR
VDFFHWVLIDVPPGLHTISAGSHSDGVIARGKPGPEALVGTATAGGLRHGLNDYTGWFAGDADMKGDYFGYDGPCPPWND
SIIHHYVFTVYALDIDRVPVEGKFTGADVRRAIQGHVLAEASLTGTYTLNPRLVK
>Mature_215_residues
MKLWSKAFADNAPIPGEFAFCVPDSASHVALSSNRNPDLHWDDVPAATRSFVLICHDRDVPSKGDDVNQEGREVPESLPR
VDFFHWVLIDVPPGLHTISAGSHSDGVIARGKPGPEALVGTATAGGLRHGLNDYTGWFAGDADMKGDYFGYDGPCPPWND
SIIHHYVFTVYALDIDRVPVEGKFTGADVRRAIQGHVLAEASLTGTYTLNPRLVK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=175, Percent_Identity=31.4285714285714, Blast_Score=76, Evalue=1e-15,
Organism=Escherichia coli, GI1786757, Length=179, Percent_Identity=25.6983240223464, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 23347; Mature: 23347

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLWSKAFADNAPIPGEFAFCVPDSASHVALSSNRNPDLHWDDVPAATRSFVLICHDRDV
CCCCHHHHCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCC
PSKGDDVNQEGREVPESLPRVDFFHWVLIDVPPGLHTISAGSHSDGVIARGKPGPEALVG
CCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCEEECCCCCCCCEEE
TATAGGLRHGLNDYTGWFAGDADMKGDYFGYDGPCPPWNDSIIHHYVFTVYALDIDRVPV
CCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCC
EGKFTGADVRRAIQGHVLAEASLTGTYTLNPRLVK
CCCCCHHHHHHHHHCCEEEEEECCEEEECCCEECC
>Mature Secondary Structure
MKLWSKAFADNAPIPGEFAFCVPDSASHVALSSNRNPDLHWDDVPAATRSFVLICHDRDV
CCCCHHHHCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCC
PSKGDDVNQEGREVPESLPRVDFFHWVLIDVPPGLHTISAGSHSDGVIARGKPGPEALVG
CCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEECCCCCCCEEECCCCCCCCEEE
TATAGGLRHGLNDYTGWFAGDADMKGDYFGYDGPCPPWNDSIIHHYVFTVYALDIDRVPV
CCCCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCC
EGKFTGADVRRAIQGHVLAEASLTGTYTLNPRLVK
CCCCCHHHHHHHHHCCEEEEEECCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058702; 9278503; 11439028 [H]