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The map label for this gene is 94309301

Identifier: 94309301

GI number: 94309301

Start: 376348

End: 378210

Strand: Direct

Name: 94309301

Synonym: Rmet_0356

Alternate gene names: NA

Gene position: 376348-378210 (Clockwise)

Preceding gene: 94309300

Following gene: 94309302

Centisome position: 9.58

GC content: 65.38

Gene sequence:

>1863_bases
GTGAACGCCCCCCCCACACCTGCCGCGCATCATCCAGAAGCGCCCGCTTTCAATACCGATACCAACTGCACTGGCCGTCA
CGCCGATCCGTCGCTATCGCTCGGGATGATTGGCAACTGCGCATTCTCGGCACTGGTCGACGGACGCGGCCGCATCGTCT
GGTGTTGCCTGCCGCGCTACGATGCCGACCCCGTTTTCAATGCGCTGCTCGATTCGAGCGAGAACGGTGGCCACTTTTCC
ATCGAGGTGGAAGACCTGGCGAAGTCCACGCAGTGGTACGAGCCGAATACGGCCATCCTGCGCACGCGCCTGTACGACAA
GCATGGTCACTGCCTGGAAATCACCGACTTCTGCCCTCGGTTCTTCCGGCTCGGACGCTATTTCCGCCCGCTGACGCTGG
TGCGGCGGATCCGGCCGGTCCGTGGCGCGCCACGGGTGCGGGTCACGGTGGCACCGCGCTTCAACTGGGGCCGGATCAAG
CCGCAGATGACACGCGGCAGCAGCCATGTGCGCTATATCGGCGAGGACCTGACGCTGCGGATGACCACAGACGCGCCGCT
GGCCTATGTGCTGTCGAACACGCCGTTCCTGGTCACGCGCAACTACAACTTCATTCTCGGGCCAGATGAAACGCTGGCGC
ATGGCGTGGAGGAGACCGCGCGCGACTTCGAACAGGAGACCACGTCCTACTGGCGTATCTGGAGCCGCCGGCTGGCCGTG
CCGCGCGAATGGCAGGACGCCGTGATCCGCGCGGCGATCACGCTGAAGATGTCGCTCTACGAGGAGACTGGCGCGATCGT
CGCGGCGATGACAACGAGCATTCCCGAGGCGCCCGGCAGCGGCCGGAACTGGGACTACCGCTACTGCTGGTTGCGCGACG
CGTTCTTCGTGGTGCGCGCGCTCAACAGCCTGTCCGAAGTCGGCACGATGGAGGACTACATGCGCTGGCTGACGAATGTC
GTCGTGCAGGCGCAGGATGGCCATATCCAGCCGCTCTACGGCATCGGGCTCGAACGCGAGCTGCCGGAGAGCGTCCTCGA
TCATCTGGGCGGATATCGCAATATGGGCCCGGTGCGCGTGGGCAACCAGGCGCAGGAGCATTTCCAGCACGATGTCTACG
GCAACGTGGTGCTCGGCGCCGCGCAGGCGTTTCACGACCACCGGCTGCTGCATCGTGGCGGCCTGACGGAATTCCACCGG
CTCGAGGACGTCGGCGAGCAGGCGGTGCGCGTGTTCGGCACGCCGGACGCGGGCATGTGGGAGTTGCGCACGCGCGCGCG
GGTCCATACGTCTTCGGCGCTGATGAGCTGGGCAGCCTGCGACCGGCTGGCCAAGATCGCCACCAAGCTCGAGCACCCGC
AGCGCGCCGCGTACTGGGCGGAACATGCCGACCGCATGAAGCAACGCATCCTGGCCGAATCGTGGAGCGAGTCGCGACAG
GCTTTCGCGGAGAGTTTCGGCGGTAACGTGCTCGACGCCAGCGTGCTGCTGATGGCGGAAGTGAATTTCATCGACCCGAA
GGACCCGCGTTTCATTGCGACGCTGAAGGCGCTCGAGGAAACGCTCTGCGACGGACCGTACATGCGGCGCTACGAGGCGC
CGGACGACTTTGGCAAGCCCGAGACAGCCTTCAATATCTGCACGTTCTGGCGCATCGACGCGCTGGCACGCATCGGCCGT
CGCGAGGAAGCGCGCGAAATCTTCGAGGCCATGCTGGCGGCGCGCAATCCGCTCGGGTTGTTGTCGGAGGACACGCACCC
GGTCACGGGCGAGATGTGGGGCAACTTCCCCCAGACCTATTCGATGGTCGGCCTGATCAATGGCGCCGTACGGCTGTCGG
CCCCCTGGGACAGCGTGATTTGA

Upstream 100 bases:

>100_bases
GGCTTCATCGATCCGCCCATGCTCTTCTGGCGCTCAGGGCGCAACGCGGCGGCAAGCCGCAGTCCGTCTCATCCACTTCG
TCCGAAACGGAGGACTCGCT

Downstream 100 bases:

>100_bases
ACGAGGAGTGGATCTCAACCAGAAGCGAGATATGGGAAGACTAGTAGCCGTATCGAACCGGGTTGCCGACCCGCGGAATC
ATGCGGCGGGCGGACTTGCC

Product: glycoside hydrolase, family 15

Products: NA

Alternate protein names: Glycosyl Hydrolase; Glycosyl Hydrolase Family; Glycoside Hydrolase Family; Glucoamylase; Glycosy Hydrolase Family Protein; Trehalose-Phosphatase; Glycoside Hydrolase Family Protein; Glucoamylase-Like Glycosyl Hydrolase; Trehalose Phosphatase; Glycosyl Hydrolase Protein; Glucoamylase Or Related Glycosyl Hydrolase; Six-Hairpin Glycosidase-Like Protein; Trehalose 6-Phosphatase; Trehalose-Phosphatase/Glycoside Hydrolase; Trehalose-Phosphatase/ Glycoside Hydrolase; Glucoamylase Or Related Glycosyl Hydrolase Protein; Hydrolase; Glycosyl Hydrolase Glycosyl Hydrolase Family; Glycosyl Hydrolase Family Protein; Glucoamylase-Related Protein Trehalase

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MNAPPTPAAHHPEAPAFNTDTNCTGRHADPSLSLGMIGNCAFSALVDGRGRIVWCCLPRYDADPVFNALLDSSENGGHFS
IEVEDLAKSTQWYEPNTAILRTRLYDKHGHCLEITDFCPRFFRLGRYFRPLTLVRRIRPVRGAPRVRVTVAPRFNWGRIK
PQMTRGSSHVRYIGEDLTLRMTTDAPLAYVLSNTPFLVTRNYNFILGPDETLAHGVEETARDFEQETTSYWRIWSRRLAV
PREWQDAVIRAAITLKMSLYEETGAIVAAMTTSIPEAPGSGRNWDYRYCWLRDAFFVVRALNSLSEVGTMEDYMRWLTNV
VVQAQDGHIQPLYGIGLERELPESVLDHLGGYRNMGPVRVGNQAQEHFQHDVYGNVVLGAAQAFHDHRLLHRGGLTEFHR
LEDVGEQAVRVFGTPDAGMWELRTRARVHTSSALMSWAACDRLAKIATKLEHPQRAAYWAEHADRMKQRILAESWSESRQ
AFAESFGGNVLDASVLLMAEVNFIDPKDPRFIATLKALEETLCDGPYMRRYEAPDDFGKPETAFNICTFWRIDALARIGR
REEAREIFEAMLAARNPLGLLSEDTHPVTGEMWGNFPQTYSMVGLINGAVRLSAPWDSVI

Sequences:

>Translated_620_residues
MNAPPTPAAHHPEAPAFNTDTNCTGRHADPSLSLGMIGNCAFSALVDGRGRIVWCCLPRYDADPVFNALLDSSENGGHFS
IEVEDLAKSTQWYEPNTAILRTRLYDKHGHCLEITDFCPRFFRLGRYFRPLTLVRRIRPVRGAPRVRVTVAPRFNWGRIK
PQMTRGSSHVRYIGEDLTLRMTTDAPLAYVLSNTPFLVTRNYNFILGPDETLAHGVEETARDFEQETTSYWRIWSRRLAV
PREWQDAVIRAAITLKMSLYEETGAIVAAMTTSIPEAPGSGRNWDYRYCWLRDAFFVVRALNSLSEVGTMEDYMRWLTNV
VVQAQDGHIQPLYGIGLERELPESVLDHLGGYRNMGPVRVGNQAQEHFQHDVYGNVVLGAAQAFHDHRLLHRGGLTEFHR
LEDVGEQAVRVFGTPDAGMWELRTRARVHTSSALMSWAACDRLAKIATKLEHPQRAAYWAEHADRMKQRILAESWSESRQ
AFAESFGGNVLDASVLLMAEVNFIDPKDPRFIATLKALEETLCDGPYMRRYEAPDDFGKPETAFNICTFWRIDALARIGR
REEAREIFEAMLAARNPLGLLSEDTHPVTGEMWGNFPQTYSMVGLINGAVRLSAPWDSVI
>Mature_620_residues
MNAPPTPAAHHPEAPAFNTDTNCTGRHADPSLSLGMIGNCAFSALVDGRGRIVWCCLPRYDADPVFNALLDSSENGGHFS
IEVEDLAKSTQWYEPNTAILRTRLYDKHGHCLEITDFCPRFFRLGRYFRPLTLVRRIRPVRGAPRVRVTVAPRFNWGRIK
PQMTRGSSHVRYIGEDLTLRMTTDAPLAYVLSNTPFLVTRNYNFILGPDETLAHGVEETARDFEQETTSYWRIWSRRLAV
PREWQDAVIRAAITLKMSLYEETGAIVAAMTTSIPEAPGSGRNWDYRYCWLRDAFFVVRALNSLSEVGTMEDYMRWLTNV
VVQAQDGHIQPLYGIGLERELPESVLDHLGGYRNMGPVRVGNQAQEHFQHDVYGNVVLGAAQAFHDHRLLHRGGLTEFHR
LEDVGEQAVRVFGTPDAGMWELRTRARVHTSSALMSWAACDRLAKIATKLEHPQRAAYWAEHADRMKQRILAESWSESRQ
AFAESFGGNVLDASVLLMAEVNFIDPKDPRFIATLKALEETLCDGPYMRRYEAPDDFGKPETAFNICTFWRIDALARIGR
REEAREIFEAMLAARNPLGLLSEDTHPVTGEMWGNFPQTYSMVGLINGAVRLSAPWDSVI

Specific function: Unknown

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70173; Mature: 70173

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPPTPAAHHPEAPAFNTDTNCTGRHADPSLSLGMIGNCAFSALVDGRGRIVWCCLPRY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC
DADPVFNALLDSSENGGHFSIEVEDLAKSTQWYEPNTAILRTRLYDKHGHCLEITDFCPR
CCCHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHEEHHHCCCCCEEEHHHHHHH
FFRLGRYFRPLTLVRRIRPVRGAPRVRVTVAPRFNWGRIKPQMTRGSSHVRYIGEDLTLR
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEECCCEEEE
MTTDAPLAYVLSNTPFLVTRNYNFILGPDETLAHGVEETARDFEQETTSYWRIWSRRLAV
EECCCCEEEEECCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PREWQDAVIRAAITLKMSLYEETGAIVAAMTTSIPEAPGSGRNWDYRYCWLRDAFFVVRA
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHH
LNSLSEVGTMEDYMRWLTNVVVQAQDGHIQPLYGIGLERELPESVLDHLGGYRNMGPVRV
HHHHHHCCCHHHHHHHHHHHEEECCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCCEEC
GNQAQEHFQHDVYGNVVLGAAQAFHDHRLLHRGGLTEFHRLEDVGEQAVRVFGTPDAGMW
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCHH
ELRTRARVHTSSALMSWAACDRLAKIATKLEHPQRAAYWAEHADRMKQRILAESWSESRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAESFGGNVLDASVLLMAEVNFIDPKDPRFIATLKALEETLCDGPYMRRYEAPDDFGKP
HHHHHHCCCHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
ETAFNICTFWRIDALARIGRREEAREIFEAMLAARNPLGLLSEDTHPVTGEMWGNFPQTY
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHH
SMVGLINGAVRLSAPWDSVI
HHHHHHCCCEEECCCHHCCC
>Mature Secondary Structure
MNAPPTPAAHHPEAPAFNTDTNCTGRHADPSLSLGMIGNCAFSALVDGRGRIVWCCLPRY
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC
DADPVFNALLDSSENGGHFSIEVEDLAKSTQWYEPNTAILRTRLYDKHGHCLEITDFCPR
CCCHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCCHHHHEEHHHCCCCCEEEHHHHHHH
FFRLGRYFRPLTLVRRIRPVRGAPRVRVTVAPRFNWGRIKPQMTRGSSHVRYIGEDLTLR
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHCCCCCCEEEECCCEEEE
MTTDAPLAYVLSNTPFLVTRNYNFILGPDETLAHGVEETARDFEQETTSYWRIWSRRLAV
EECCCCEEEEECCCCEEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PREWQDAVIRAAITLKMSLYEETGAIVAAMTTSIPEAPGSGRNWDYRYCWLRDAFFVVRA
CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHH
LNSLSEVGTMEDYMRWLTNVVVQAQDGHIQPLYGIGLERELPESVLDHLGGYRNMGPVRV
HHHHHHCCCHHHHHHHHHHHEEECCCCCCCCHHCCCCCCCCHHHHHHHCCCCCCCCCEEC
GNQAQEHFQHDVYGNVVLGAAQAFHDHRLLHRGGLTEFHRLEDVGEQAVRVFGTPDAGMW
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCHH
ELRTRARVHTSSALMSWAACDRLAKIATKLEHPQRAAYWAEHADRMKQRILAESWSESRQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFAESFGGNVLDASVLLMAEVNFIDPKDPRFIATLKALEETLCDGPYMRRYEAPDDFGKP
HHHHHHCCCHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC
ETAFNICTFWRIDALARIGRREEAREIFEAMLAARNPLGLLSEDTHPVTGEMWGNFPQTY
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCHHH
SMVGLINGAVRLSAPWDSVI
HHHHHHCCCEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA