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The map label for this gene is ssb1 [H]

Identifier: 94309260

GI number: 94309260

Start: 333925

End: 334470

Strand: Direct

Name: ssb1 [H]

Synonym: Rmet_0315

Alternate gene names: 94309260

Gene position: 333925-334470 (Clockwise)

Preceding gene: 94309259

Following gene: 94309261

Centisome position: 8.5

GC content: 66.3

Gene sequence:

>546_bases
ATGGCATCGGTCAACAAAGTCATTCTCGTCGGCAACCTGGGCGCCGACCCCGAAACCCGCTACATGCCCAGCGGCGATGC
CGTGACCAACATCCGGCTGGCGACGACCGACCGCTACAAGGACAAGCAGTCCGGCGAATTCAAGGAAGCCACCGAGTGGC
ACCGCATCGCGTTCTTCGGCAAGCTGGCCGAGATCGCCGGCCAGTACCTGCGCAAGGGTTCGTCGGTCTATATCGAGGGC
CGCATCCGCACGCGCAAGTGGCAGGACCAGTCCGGTCAGGACAAGTACAGCACCGAAATCGTCGCGGACCAGATGCAGAT
GCTGGGTGGCCGTGGCCAGGGCGGTGGCGGCGATGAAGGCGGCTACGGCGGTGGTGCCGGTGGCGGTGCGGGCGGTGGCG
GTGGCTACAGCCGCGAATCGCAAGGCGGCGGTGGCCGCAGCCAGGGCGGTGGTGCCCAGGGCGGCGGTCAGCAAGGCGGC
CAGCGTCGCCAGCAACAGGCACCGTCGAACGGCTTCGAGGATATGGACGACGATATTCCGTTCTAA

Upstream 100 bases:

>100_bases
ATCCGTAGGGCGCGTGATGTCGTTTACGTCCCAGCTTTTTTTGCACGTTCCTTACGTTTAGTACCGCGCTGAAAGGGCGC
GGTCCCTGGAGATCATCTAC

Downstream 100 bases:

>100_bases
CCTTGAGTAATTGATATCTGTGAAGATTAGCCCCGCTTAAGAGCGGGGTTTTTCTTTTTAATCAGTATCTTATGGGCGGT
GGTGCATTGGAAAGATTTGA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MASVNKVILVGNLGADPETRYMPSGDAVTNIRLATTDRYKDKQSGEFKEATEWHRIAFFGKLAEIAGQYLRKGSSVYIEG
RIRTRKWQDQSGQDKYSTEIVADQMQMLGGRGQGGGGDEGGYGGGAGGGAGGGGGYSRESQGGGGRSQGGGAQGGGQQGG
QRRQQQAPSNGFEDMDDDIPF

Sequences:

>Translated_181_residues
MASVNKVILVGNLGADPETRYMPSGDAVTNIRLATTDRYKDKQSGEFKEATEWHRIAFFGKLAEIAGQYLRKGSSVYIEG
RIRTRKWQDQSGQDKYSTEIVADQMQMLGGRGQGGGGDEGGYGGGAGGGAGGGGGYSRESQGGGGRSQGGGAQGGGQQGG
QRRQQQAPSNGFEDMDDDIPF
>Mature_180_residues
ASVNKVILVGNLGADPETRYMPSGDAVTNIRLATTDRYKDKQSGEFKEATEWHRIAFFGKLAEIAGQYLRKGSSVYIEGR
IRTRKWQDQSGQDKYSTEIVADQMQMLGGRGQGGGGDEGGYGGGAGGGAGGGGGYSRESQGGGGRSQGGGAQGGGQQGGQ
RRQQQAPSNGFEDMDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=113, Percent_Identity=34.5132743362832, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1790494, Length=187, Percent_Identity=56.1497326203209, Blast_Score=178, Evalue=2e-46,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18978; Mature: 18847

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVNKVILVGNLGADPETRYMPSGDAVTNIRLATTDRYKDKQSGEFKEATEWHRIAFFG
CCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
KLAEIAGQYLRKGSSVYIEGRIRTRKWQDQSGQDKYSTEIVADQMQMLGGRGQGGGGDEG
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
GYGGGAGGGAGGGGGYSRESQGGGGRSQGGGAQGGGQQGGQRRQQQAPSNGFEDMDDDIP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
F
C
>Mature Secondary Structure 
ASVNKVILVGNLGADPETRYMPSGDAVTNIRLATTDRYKDKQSGEFKEATEWHRIAFFG
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHH
KLAEIAGQYLRKGSSVYIEGRIRTRKWQDQSGQDKYSTEIVADQMQMLGGRGQGGGGDEG
HHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
GYGGGAGGGAGGGGGYSRESQGGGGRSQGGGAQGGGQQGGQRRQQQAPSNGFEDMDDDIP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948488 [H]