Click here to switch to the map view.

The map label for this gene is 94309261

Identifier: 94309261

GI number: 94309261

Start: 334703

End: 335569

Strand: Direct

Name: 94309261

Synonym: Rmet_0316

Alternate gene names: NA

Gene position: 334703-335569 (Clockwise)

Preceding gene: 94309260

Following gene: 94309262

Centisome position: 8.52

GC content: 58.02

Gene sequence:

>867_bases
ATGCGCGCTGGCATCTGCAAACTGACGGGGCAGCATGGCATCTTCCTGAAGTCCCACATCATTCCTGCTGCCCTCACTCG
GAAGGACAAGTCTGCCCCGTTCATAGAGGCGGGCAACGGCCGCCCTCCTAAGCGAACCTGGAACAGTTGGTTCGATAGCG
AGTTGGTAATCCAGCGCGGCGAGAAGATCCTCACCGAGTTCGACACCTGGGCCATTGCAAACATGAGGCGGGCAAAGCTG
GTATGGAGCGGTTGGGGAGAAAGCACCGTTCTTGAGCCGTCAATGGACTTCAGCGCGACCCATCAGCTCCTTGAGGAGCA
TGACAACCATCTTGGCGTGCATTCGATTCAGGGCATCGATACCGCCCGACTTCGGCTCTTCTTGCTCAGCCTTCTCTGGC
GGGCGGCGGTAACGAAGCGGCCAGAGTTTGAGGAGATCAAGCTGCCTGCGGGCGACGAGCAGCAACTACGCCGCATGCTG
TTGGAAGGGACTGCGGAGCCCGCGGATTTTTACCCCATCACGCTCACGCAACTCTCCACCTTGGGCCCTCATCACAATCA
AACACCCATCTATCGGGACTATCACTTCGGCCCTGACGCCGAACGCGGACTTCCGCCGGCGAAGACCTATCGTTTCTACT
TTGATGGACTGATTGCAATCGTGTTCCTGCCGGGATACTCGCCCGATCTGTACGAGGGGATCTCAGCCATTGCAGTAGGA
GGGAAGCCAGACCGACTGGACGTGGTGACCGTGCCATTTGAGCACTCCTTCCAGCATGAAAATATGGGTAAGGTCGTTCT
GGAGGCGCACACCAACTGGCCGGAAAAGTCCGAGCGCCTAAACATGGCGGGCGGAAATCGTGCGTAA

Upstream 100 bases:

>100_bases
TCCGGAAGCGGAAGTGTCAACTTTCGACGTCCTAACGCGAAAATCTTAGTTAGGATTCTCAATGTCTAAACTGAGTGCGG
CTAAGACCGCATAAATGTAA

Downstream 100 bases:

>100_bases
TGGCAGTTGGGGGGCAGCCGTTGTCCGCTGCTCTCAACCACAGAAGCTGAGCCTAGCAGGCAGTAGGCCGTTGAAAGCTG
GGCTCGAACACTGCCATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRAGICKLTGQHGIFLKSHIIPAALTRKDKSAPFIEAGNGRPPKRTWNSWFDSELVIQRGEKILTEFDTWAIANMRRAKL
VWSGWGESTVLEPSMDFSATHQLLEEHDNHLGVHSIQGIDTARLRLFLLSLLWRAAVTKRPEFEEIKLPAGDEQQLRRML
LEGTAEPADFYPITLTQLSTLGPHHNQTPIYRDYHFGPDAERGLPPAKTYRFYFDGLIAIVFLPGYSPDLYEGISAIAVG
GKPDRLDVVTVPFEHSFQHENMGKVVLEAHTNWPEKSERLNMAGGNRA

Sequences:

>Translated_288_residues
MRAGICKLTGQHGIFLKSHIIPAALTRKDKSAPFIEAGNGRPPKRTWNSWFDSELVIQRGEKILTEFDTWAIANMRRAKL
VWSGWGESTVLEPSMDFSATHQLLEEHDNHLGVHSIQGIDTARLRLFLLSLLWRAAVTKRPEFEEIKLPAGDEQQLRRML
LEGTAEPADFYPITLTQLSTLGPHHNQTPIYRDYHFGPDAERGLPPAKTYRFYFDGLIAIVFLPGYSPDLYEGISAIAVG
GKPDRLDVVTVPFEHSFQHENMGKVVLEAHTNWPEKSERLNMAGGNRA
>Mature_288_residues
MRAGICKLTGQHGIFLKSHIIPAALTRKDKSAPFIEAGNGRPPKRTWNSWFDSELVIQRGEKILTEFDTWAIANMRRAKL
VWSGWGESTVLEPSMDFSATHQLLEEHDNHLGVHSIQGIDTARLRLFLLSLLWRAAVTKRPEFEEIKLPAGDEQQLRRML
LEGTAEPADFYPITLTQLSTLGPHHNQTPIYRDYHFGPDAERGLPPAKTYRFYFDGLIAIVFLPGYSPDLYEGISAIAVG
GKPDRLDVVTVPFEHSFQHENMGKVVLEAHTNWPEKSERLNMAGGNRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32522; Mature: 32522

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAGICKLTGQHGIFLKSHIIPAALTRKDKSAPFIEAGNGRPPKRTWNSWFDSELVIQRG
CCCCEEEECCCCCEEEHHCCCHHHHHCCCCCCCEEECCCCCCCCHHHHHHCCCHHHHHHH
EKILTEFDTWAIANMRRAKLVWSGWGESTVLEPSMDFSATHQLLEEHDNHLGVHSIQGID
HHHHHHHHHHHHHCCHHEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEECCCC
TARLRLFLLSLLWRAAVTKRPEFEEIKLPAGDEQQLRRMLLEGTAEPADFYPITLTQLST
HHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHH
LGPHHNQTPIYRDYHFGPDAERGLPPAKTYRFYFDGLIAIVFLPGYSPDLYEGISAIAVG
CCCCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHCEEEEEECCCCCCHHHHCCCEEEEC
GKPDRLDVVTVPFEHSFQHENMGKVVLEAHTNWPEKSERLNMAGGNRA
CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHEEECCCCCCC
>Mature Secondary Structure
MRAGICKLTGQHGIFLKSHIIPAALTRKDKSAPFIEAGNGRPPKRTWNSWFDSELVIQRG
CCCCEEEECCCCCEEEHHCCCHHHHHCCCCCCCEEECCCCCCCCHHHHHHCCCHHHHHHH
EKILTEFDTWAIANMRRAKLVWSGWGESTVLEPSMDFSATHQLLEEHDNHLGVHSIQGID
HHHHHHHHHHHHHCCHHEEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEECCCC
TARLRLFLLSLLWRAAVTKRPEFEEIKLPAGDEQQLRRMLLEGTAEPADFYPITLTQLST
HHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHH
LGPHHNQTPIYRDYHFGPDAERGLPPAKTYRFYFDGLIAIVFLPGYSPDLYEGISAIAVG
CCCCCCCCCCEECCCCCCCHHHCCCCHHHHHHHHHCEEEEEECCCCCCHHHHCCCEEEEC
GKPDRLDVVTVPFEHSFQHENMGKVVLEAHTNWPEKSERLNMAGGNRA
CCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCCHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA