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The map label for this gene is yajR [H]

Identifier: 94309259

GI number: 94309259

Start: 332393

End: 333649

Strand: Direct

Name: yajR [H]

Synonym: Rmet_0314

Alternate gene names: 94309259

Gene position: 332393-333649 (Clockwise)

Preceding gene: 94309257

Following gene: 94309260

Centisome position: 8.46

GC content: 66.27

Gene sequence:

>1257_bases
ATGCCGTCGATCCCGCCTTCTTCCCAGCCCGCATCCCTTGCCGACGAGTCCACCCGGACCGAGCCCGCGCGTGACCGCAT
GACCAAAGGCGAGTTGCGCGCCAGCCTCACACTCGCCAGCATCTTTGCCCTGCGCATGCTGGGCCTGTTCCTGATCCTGC
CGGTCTTTGCCGAGTACGCGCGCACGCTGCCCGACGGGCACGATGCCCAGCGGGTTGGCATCGCGATGGGGATCTACGGG
CTGATGCAGGCTTTCCTGCACATTCCATTGGGCTGGCTGTCCGACCGGGTCGGGCGCAAGCCGGTCATGGTCGCGGGGCT
GCTGCTCTTCGTAGCCGGCGCGCTGGTTGCAGCGTTCTCCGATACCCTGACCGGCATCATCATCGGCCGCGCGTTGCAGG
GCATGGGCGCGATCTCGGCGGCCATCACGGCCTGTATCGCGGATCTGACGCGTGAACGCCATCGCACCAAGGCCATGGCA
ATGGTCGGCGGCAGTATCGGCCTGACGTTCGCGCTCTCGCTGGTGATTGCTTCGCCACTTCTGCATTCGATCGGTATGTC
GGGCATCTTCAGCCTGATGGCCGTGTTCGGCGTGGTGGCGATCGGCGTGACGCTGTTCCTGGTGCCTGCGCCGCCGCCGC
CGCATCCGGTGCGGCTACCGTTCCGCCAAGTGCTGATGAATGCCGACCTGATTCGTCTGAATGTCGGCGTGCTGGCGCTC
CATGCGAGCCAGGTGGCCATGTTCATGGTCGTGCCGGCCATGCTGAGCGACGCGGGGATGCCGCTGGACCAGCACTGGAA
GGTCTATCTGCCGGTCGTGCTGGTGTCGTTCCTGCTGATGCTGGCGCCGATGATGGCGGCCGAGCGCTACGGCAAGGTGC
GCCCGGTGCTGCTGGCCTCGGTGGCCCTGATGACGGTCGTCCAGATCCTGTTCGCGTCGGTCCATGGCCTGTGGCCGATC
GTCGGCGTGCTGCTGCTGTTCTTCGTCGCGTTCAACGTGCTGGAGGCGATGCAACCATCGCTGGTGTCGCGTTACGCCGC
GGTCAGCCGTGGGGCGGCGCTTGGCGTCTACAACACGACCCAGTCGCTGGGCCTGTTCCTCGGTGGCGTGGCCGGCGGCT
GGCTGCTCCAGCACGAAGGACGCAGCGCAGTTTTCATAGGGTGCGCGGTGGTTCTGGTGCTCTGGCTTATAATCGCGTGG
AGCATGAAGGCGCCCCCGGCCCGTAGCCAAGGGAGTGCTTCTGCGGTGGCGGCTTAG

Upstream 100 bases:

>100_bases
CGAATGACAAAAGGGTGGAGACAGCCCCGCGTCAGCAACTTCCCGGCGTTCGGACGATCGAAGCAGTCGCCGACCGGACC
AGATTCCTTATACGACCGCA

Downstream 100 bases:

>100_bases
AAACCACTTCAGAATGATTCTGGCGTTGGTGTACTGCCTTCGGCCGCACGTCTAGCCAGAACCGCTTCGCTTCATCCTGA
AGCGGTTTTTTAGACACAGT

Product: putative transporter, major facilitator family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MPSIPPSSQPASLADESTRTEPARDRMTKGELRASLTLASIFALRMLGLFLILPVFAEYARTLPDGHDAQRVGIAMGIYG
LMQAFLHIPLGWLSDRVGRKPVMVAGLLLFVAGALVAAFSDTLTGIIIGRALQGMGAISAAITACIADLTRERHRTKAMA
MVGGSIGLTFALSLVIASPLLHSIGMSGIFSLMAVFGVVAIGVTLFLVPAPPPPHPVRLPFRQVLMNADLIRLNVGVLAL
HASQVAMFMVVPAMLSDAGMPLDQHWKVYLPVVLVSFLLMLAPMMAAERYGKVRPVLLASVALMTVVQILFASVHGLWPI
VGVLLLFFVAFNVLEAMQPSLVSRYAAVSRGAALGVYNTTQSLGLFLGGVAGGWLLQHEGRSAVFIGCAVVLVLWLIIAW
SMKAPPARSQGSASAVAA

Sequences:

>Translated_418_residues
MPSIPPSSQPASLADESTRTEPARDRMTKGELRASLTLASIFALRMLGLFLILPVFAEYARTLPDGHDAQRVGIAMGIYG
LMQAFLHIPLGWLSDRVGRKPVMVAGLLLFVAGALVAAFSDTLTGIIIGRALQGMGAISAAITACIADLTRERHRTKAMA
MVGGSIGLTFALSLVIASPLLHSIGMSGIFSLMAVFGVVAIGVTLFLVPAPPPPHPVRLPFRQVLMNADLIRLNVGVLAL
HASQVAMFMVVPAMLSDAGMPLDQHWKVYLPVVLVSFLLMLAPMMAAERYGKVRPVLLASVALMTVVQILFASVHGLWPI
VGVLLLFFVAFNVLEAMQPSLVSRYAAVSRGAALGVYNTTQSLGLFLGGVAGGWLLQHEGRSAVFIGCAVVLVLWLIIAW
SMKAPPARSQGSASAVAA
>Mature_417_residues
PSIPPSSQPASLADESTRTEPARDRMTKGELRASLTLASIFALRMLGLFLILPVFAEYARTLPDGHDAQRVGIAMGIYGL
MQAFLHIPLGWLSDRVGRKPVMVAGLLLFVAGALVAAFSDTLTGIIIGRALQGMGAISAAITACIADLTRERHRTKAMAM
VGGSIGLTFALSLVIASPLLHSIGMSGIFSLMAVFGVVAIGVTLFLVPAPPPPHPVRLPFRQVLMNADLIRLNVGVLALH
ASQVAMFMVVPAMLSDAGMPLDQHWKVYLPVVLVSFLLMLAPMMAAERYGKVRPVLLASVALMTVVQILFASVHGLWPIV
GVLLLFFVAFNVLEAMQPSLVSRYAAVSRGAALGVYNTTQSLGLFLGGVAGGWLLQHEGRSAVFIGCAVVLVLWLIIAWS
MKAPPARSQGSASAVAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=389, Percent_Identity=42.6735218508997, Blast_Score=308, Evalue=5e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44248; Mature: 44117

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSIPPSSQPASLADESTRTEPARDRMTKGELRASLTLASIFALRMLGLFLILPVFAEYA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTLPDGHDAQRVGIAMGIYGLMQAFLHIPLGWLSDRVGRKPVMVAGLLLFVAGALVAAFS
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
DTLTGIIIGRALQGMGAISAAITACIADLTRERHRTKAMAMVGGSIGLTFALSLVIASPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LHSIGMSGIFSLMAVFGVVAIGVTLFLVPAPPPPHPVRLPFRQVLMNADLIRLNVGVLAL
HHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCHHEEEHHHHHH
HASQVAMFMVVPAMLSDAGMPLDQHWKVYLPVVLVSFLLMLAPMMAAERYGKVRPVLLAS
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VALMTVVQILFASVHGLWPIVGVLLLFFVAFNVLEAMQPSLVSRYAAVSRGAALGVYNTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCH
QSLGLFLGGVAGGWLLQHEGRSAVFIGCAVVLVLWLIIAWSMKAPPARSQGSASAVAA
HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
PSIPPSSQPASLADESTRTEPARDRMTKGELRASLTLASIFALRMLGLFLILPVFAEYA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTLPDGHDAQRVGIAMGIYGLMQAFLHIPLGWLSDRVGRKPVMVAGLLLFVAGALVAAFS
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
DTLTGIIIGRALQGMGAISAAITACIADLTRERHRTKAMAMVGGSIGLTFALSLVIASPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LHSIGMSGIFSLMAVFGVVAIGVTLFLVPAPPPPHPVRLPFRQVLMNADLIRLNVGVLAL
HHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCHHEEEHHHHHH
HASQVAMFMVVPAMLSDAGMPLDQHWKVYLPVVLVSFLLMLAPMMAAERYGKVRPVLLAS
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VALMTVVQILFASVHGLWPIVGVLLLFFVAFNVLEAMQPSLVSRYAAVSRGAALGVYNTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCEEEECCCH
QSLGLFLGGVAGGWLLQHEGRSAVFIGCAVVLVLWLIIAWSMKAPPARSQGSASAVAA
HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]